Kazuma Yasuhara

Molecular design, structures, and activity of antimicrobial peptide-mimetic polymers

There is an urgent need for new antibiotics which are effective against drug-resistant bacteria without contributing to resistance development. We have designed and developed antimicrobial copolymers with cationic amphiphilic structures based on the mimicry of naturally occurring antimicrobial peptides. These copolymers exhibit potent antimicrobial activity against a broad spectrum of bacteria including methicillin-resistant Staphylococcus aureus with no adverse hemolytic activity. Notably, these polymers also did not result in any measurable resistance development in E. coli. The peptide-mimetic design principle offers significant flexibility and diversity in the creation of new antimicrobial materials and their potential biomedical applications.

Synthesis of organic–inorganic hybrid bicelles–lipid bilayer nanodiscs encompassed by siloxane surfaces

Well-defined hybrid nanodiscs were produced by employing bicelle formation of a binary lipid mixture in water. The resulting nanoparticles have a lipid bilayer coated with ceramic layers, which are formed by the sol-gel reaction among the alkoxysilyl headgroups of the hybrid lipid. The hybrid bicelles displayed significant morphological stability against dry environments and surfactant addition, in stark contrast to conventional phospholipid bicelles.

Fluorescent sensor responsive to local viscosity and its application to the imaging of liquid-ordered domain in lipid membranes

A novel fluorescent sensor responsive to local viscosity in the lipid bilayer membranes was designed and synthesized. The sensor changes its fluorescence intensity reflecting the local viscosity of its surrounding medium. The fluorescence measurement showed that the sensor is capable of discriminating between different phase states of lipid bilayer. In addition, the sensor visualized liquid-ordered microdomains on giant vesicles in terms of the microviscosity with a simple fluorescence technique.

Spherical Vesicles Formed by Co-Assembly of Cyclic Pentagonal Pillar[5]quinone with Cyclic Hexagonal Pillar[6]arene

Mixing cyclic pentagonal pillar[5]quinone with cyclic hexagonal pillar[6]arene in a 12:20 molar feed ratio resulted in spontaneous production of vesicles, while assembly of pillar[6]arene and pillar[5]quinone alone produced hexagonal disks and wires, respectively. Incorporation of pentagonal pillar[5]quinone rings into hexagonal pillar[6]arene sheets gave curvature and contributed to the formation of vesicles. Conventional vesicles are generally synthesized by assembly of amphiphilic molecules containing hydrophobic and hydrophilic parts. Therefore, the co-assembly of pentagonal and hexagonal molecules to obtain spherical vesicles demonstrated in this study is a new concept based on geometric design.

Modulation of raft domains in a lipid bilayer by boundary-active curcumin

The function and mode of action of curcumin in modulating the formation of lipid raft domains were investigated by microscopic observation using model membranes. Curcumin induces fusion of lipid raft domains at extremely low concentrations through the alteration of the boundary between the ordered and disordered phases.

Porphyrin-uptake in liposomes and living cells using an exchange method with cyclodextrin

The water-solubilisation of porphyrin derivatives is very important for biological applications. Although liposomal drug carriers for porphyrin derivatives have shown significant promise in the field of medicinal chemistry (e.g., as sensitisers for photodynamic therapy), it is currently not possible to prepare lipid-membrane-incorporated tetraphenylporphyrin (TPP) with a high concentration of TPP using conventional methods. In this study, we have succeeded in preparing lipid-membrane-incorporated TPP and zinc(II) tetraphenylporphyrin (ZnTPP) from the corresponding TPP or ZnTPP·cyclodextrin complex using the exchange method in lipid-membranes composed of liposomes. Furthermore, the exchange method allowed for the incorporation of TPP or ZnTPP into the plasma membranes of HeLa cells. However, it was not possible to prepare lipid-membrane-incorporated porphyrin derivatives with polar and hydrophilic groups in the meso positions using this exchange reaction.

Spontaneous Lipid Nanodisc Fomation by Amphiphilic Polymethacrylate Copolymers

There is a growing interest in the use of lipid bilayer nanodiscs for various biochemical and biomedical applications. Among the different types of nanodiscs, the unique features of synthetic polymer-based nanodiscs have attracted additional interest. A styrene-maleic acid (SMA) copolymer demonstrated to form lipid nanodiscs has been used for structural biology related studies on membrane proteins. However, the application of SMA polymer based lipid nanodiscs is limited because of the strong absorption of the aromatic group interfering with various experimental measurements. Thus, there is considerable interest in the development of other molecular frameworks for the formation of polymer-based lipid nanodiscs. In this study, we report the first synthesis and characterization of a library of polymethacrylate random copolymers as alternatives to SMA polymer. In addition, we experimentally demonstrate the ability of these polymers to form lipid bilayer nanodiscs through the fragmentation of lipid vesicles by means of light scattering, electron microscopy, differential scanning calorimetry, and solution and solid-state NMR experiments. We further demonstrate a unique application of the newly developed polymer for kinetics and structural characterization of the aggregation of human islet amyloid polypeptide (also known as amylin) within the lipid bilayer of the polymer nanodiscs using thioflavin-T-based fluorescence and circular dichroism experiments. Our results demonstrate that the reported new styrene-free polymers can be used in high-throughput biophysical experiments. Therefore, we expect that the new polymer nanodiscs will be valuable in the structural studies of amyloid proteins and membrane proteins by various biophysical techniques.

Anisotropic Self-Assembly of Citrate-Coated Gold Nanoparticles on Fluidic Liposomes.

The behavior of self-assembly processes of nanoscale particles on plasma membranes can reveal mechanisms of important biofunctions and/or intractable diseases. Self-assembly of citrate-coated gold nanoparticles (cAuNPs) on liposomes was investigated. The adsorbed cAuNPs were initially fixed on the liposome surfaces and did not self-assemble below the phospholipid phase transition temperature (Tm ). In contrast, anisotropic cAuNP self-assembly was observed upon heating of the composite above the Tm, where the phospholipids became fluid. The number of self-assembled NPs is conveniently controlled by the initial mixing ratio of cAuNPs and liposomes. Gold nanoparticle protecting agents strongly affected the self-assembly process on the fluidic membrane.

[70]Fullerenes Assist the Formation of Phospholipid Bicelles at Low Lipid Concentrations

The incorporation of neutral [70]fullerenes (C70) led to bicelle formation in a relatively low lipid concentration range from neutral lipid mixtures (DMPC/DHPC). Furthermore, C70 addition resulted in the formation of large bicelles with a radius of ca. 100 nm, in contrast to C70-free bicelles that were formed from anionic lipid mixtures (DMPC/DHPC/DMPG). The stabilization of these bicelles was attributed to C70 incorporation into the membranes.

Morphological Change of Cell Membrane by Interaction with Domain-Swapped Cytochrome c Oligomers

Monomeric cyt c has been reported to bind to the mitochondrial membrane by electrostatic and hydrophobic interactions with anionic phospholipids. We have previously shown that domain‐swapped oligomeric cyt c retains the secondary structure of the monomer, and its surface possesses a larger area and more charges compared to the monomer. However, the effect of oligomerization of cyt c on cells has yet to be revealed. Herein, we investigated the interaction of oligomeric cyt c with anionic phospholipid‐containing vesicles and the outer membrane of HeLa cells. Oligomeric cyt c interacted more strongly than monomeric cyt c with anionic phospholipid‐containing vesicles and the outer membrane of HeLa cells. Oligomeric cyt c induced lateral phase separation of lipids in LUVs and GUVs, thereby leading to membrane disruption, whereas monomeric cyt c did not. Morphological changes in HeLa cells resulted from interaction with oligomeric cyt c, but little from interaction with the monomer. These results show that domain‐swapped oligomeric proteins might exhibit properties different to those of monomer in cell systems.