Kazumi Sakai
Kyoto University
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Featured researches published by Kazumi Sakai.
Proceedings of the National Academy of Sciences of the United States of America | 2010
Takahiro Yamashita; Hideyo Ohuchi; Sayuri Tomonari; Keiko Ikeda; Kazumi Sakai; Yoshinori Shichida
Opn5 (neuropsin) belongs to an independent group separated from the other six groups in the phylogenetic tree of opsins, for which little information of absorption characteristics and molecular properties of the members is available. Here we show that the chicken Opn5 (cOpn5m) is a UV-sensitive bistable pigment that couples with Gi subtype of G protein. The recombinant expression of cOpn5m in HEK 293s cells followed by the addition of 11-cis- and all-trans-retinal produced UV light-absorbing and visible light-absorbing forms, respectively. These forms were interconvertible by UV and visible light irradiations, respectively, indicating that cOpn5m is a bistable pigment. The absorption maxima of these forms were estimated to be 360 and 474 nm, respectively. The GTPγS binding assay clearly showed that the visible light-absorbing form having all-trans-retinal activates Gi type of G protein, whereas no Gt or Gq activation ability was observed. Immunohistochemical studies using an antibody against cOpn5m clearly showed that this pigment is localized within some types of amacrine cells and some cells in the ganglion cell layer of the retinas, the vast majority of cells in the pineal gland and serotonin-positive cells in the paraventricular organ. Because cOpn5m is the only UV-sensitive opsin among the opsins found so far in chicken, this study provides the molecular basis for UV reception in chicken.
PLOS ONE | 2012
Hideyo Ohuchi; Takahiro Yamashita; Sayuri Tomonari; Sari Fujita-Yanagibayashi; Kazumi Sakai; Sumihare Noji; Yoshinori Shichida
A mammalian type opsin 5 (neuropsin) is a recently identified ultraviolet (UV)-sensitive pigment of the retina and other photosensitive organs in birds. Two other opsin 5-related molecules have been found in the genomes of non-mammalian vertebrates. However, their functions have not been examined as yet. Here, we identify the molecular properties of a second avian opsin 5, cOpn5L2 (chicken opsin 5-like 2), and its localization in the post-hatch chicken. Spectrophotometric analysis and radionucleotide-binding assay have revealed that cOpn5L2 is a UV-sensitive bistable pigment that couples with the Gi subtype of guanine nucleotide-binding protein (G protein). As a bistable pigment, it also shows the direct binding ability to agonist all-trans-retinal to activate G protein. The absorption maxima of UV-light-absorbing and visible light-absorbing forms were 350 and 521 nm, respectively. Expression analysis showed relatively high expression of cOpn5L2 mRNA in the adrenal gland, which is not photoreceptive but an endocrine organ, while lower expression was found in the brain and retina. At the protein level, cOpn5L2 immunoreactive cells were present in the chromaffin cells of the adrenal gland. In the brain, cOpn5L2 immunoreactive cells were found in the paraventricular and supraoptic nuclei of the anterior hypothalamus, known for photoreceptive deep brain areas. In the retina, cOpn5L2 protein was localized to subsets of cells in the ganglion cell layer and the inner nuclear layer. These results suggest that the non-mammalian type opsin 5 (Opn5L2) functions as a second UV sensor in the photoreceptive organs, while it might function as chemosensor using its direct binding ability to agonist all-trans-retinal in non-photoreceptive organs such as the adrenal gland of birds.
Journal of Biological Chemistry | 2014
Takahiro Yamashita; Katsuhiko Ono; Hideyo Ohuchi; Akane Yumoto; Hitoshi Gotoh; Sayuri Tomonari; Kazumi Sakai; Hirofumi Fujita; Yasushi Imamoto; Sumihare Noji; Katsuki Nakamura; Yoshinori Shichida
Background: Opn5 is considered to regulate nonvisual photoreception in the retina and brain of animals. Results: Mouse and primate UV-sensitive Opn5 along with retinoid isomerase are localized in the preoptic hypothalamus. Conclusion: Mammalian Opn5 can function as a high sensitivity photosensor in the deep brain with the assistance of 11-cis-retinal supplying system. Significance: Mammals, including humans, may detect short wavelength light within the brain via Opn5. Opn5 is one of the recently identified opsin groups that is responsible for nonvisual photoreception in animals. We previously showed that a chicken homolog of mammalian Opn5 (Opn5m) is a Gi-coupled UV sensor having molecular properties typical of bistable pigments. Here we demonstrated that mammalian Opn5m evolved to be a more specialized photosensor by losing one of the characteristics of bistable pigments, direct binding of all-trans-retinal. We first confirmed that Opn5m proteins in zebrafish, Xenopus tropicalis, mouse, and human are also UV-sensitive pigments. Then we found that only mammalian Opn5m proteins lack the ability to directly bind all-trans-retinal. Mutational analysis showed that these characteristics were acquired by a single amino acid replacement at position 168. By comparing the expression patterns of Opn5m between mammals and chicken, we found that, like chicken Opn5m, mammalian Opn5m was localized in the ganglion cell layer and inner nuclear layer of the retina. However, the mouse and primate (common marmoset) opsins were distributed not in the posterior hypothalamus (including the region along the third ventricle) where chicken Opn5m is localized, but in the preoptic hypothalamus. Interestingly, RPE65, an essential enzyme for forming 11-cis-retinal in the visual cycle is expressed near the preoptic hypothalamus of the mouse and common marmoset brain but not near the region of the chicken brain where chicken Opn5m is expressed. Therefore, mammalian Opn5m may work exclusively as a short wavelength sensor in the brain as well as in the retina with the assistance of an 11-cis-retinal-supplying system.
consumer communications and networking conference | 2011
Kazumi Sakai; Yasuo Okabe
An on-demand electric power supply architecture in home based on quality-aware routing is proposed. In the architecture power sources and powered devices send quality parameters by which they supply or consume electric power. The network itself chooses best matching of a source and a device, and makes reservation of a path by RSVP-based QoS routing mechanism. In this paper the basic concepts and the overview of the proposed architecture is described.
symposium on applications and the internet | 2012
Takuya Miyamoto; Youichi Koyama; Kazumi Sakai; Yasuo Okabe
Recently, many research works on reducing energy consumption using information and communication technology (ICT) have done. In those works, however, electrical power saving in home heavily relies on human effort; we can expect little performance since it can save power only when living people have awareness. To overcome this problem, we have been studied energy-on-demand home networking, based on the concept of informatization of Energy (i-energy). Each electric current from a power source to a powered device is classified into several colored classes by the quality (Power Coloring) and the route is pinned on a path. In this paper a power resource reservation system is proposed using GMPLS framework. We have focused on the similarity between physical transmission methods for power coloring and switching technologies in GMPLS. MPLS is applied to a control mechanism of various physical transmission systems, such as power packets or power circuit switching, and propose a power resource reservation system based on QoS routing protocols for the Internet, RSVP-TE and OSPF-TE.
PLOS ONE | 2015
Kazumi Sakai; Takahiro Yamashita; Yasushi Imamoto; Yoshinori Shichida
Opn3/TMT opsins belong to one of the opsin groups with vertebrate visual and non-visual opsins, and are widely distributed in eyes, brains and other internal organs in various vertebrates and invertebrates. Vertebrate Opn3/TMT opsins are further classified into four groups on the basis of their amino acid identities. However, there is limited information about molecular properties of these groups, due to the difficulty in preparing the recombinant proteins. Here, we successfully expressed recombinant proteins of TMT1 and TMT2 opsins of medaka fish (Oryzias latipes) in cultured cells and characterized their molecular properties. Spectroscopic and biochemical studies demonstrated that TMT1 and TMT2 opsins functioned as blue light-sensitive Gi/Go-coupled receptors, but exhibited spectral properties and photo-convertibility of the active state different from each other. TMT1 opsin forms a visible light-absorbing active state containing all-trans-retinal, which can be photo-converted to 7-cis- and 9-cis-retinal states in addition to the original 11-cis-retinal state. In contrast, the active state of TMT2 opsin is a UV light-absorbing state having all-trans-retinal and does not photo-convert to any other state, including the original 11-cis-retinal state. Thus, TMT opsins are diversified so as to form a different type of active state, which may be responsible for their different functions.
Scientific Reports | 2017
Kazumi Sakai; Kei Tsutsui; Takahiro Yamashita; Naoyuki Iwabe; Keisuke Takahashi; Akimori Wada; Yoshinori Shichida
The genome of Drosophila melanogaster contains seven rhodopsin genes. Rh1-6 proteins are known to have respective absorption spectra and function as visual pigments in ocelli and compound eyes. In contrast, Rh7 protein was recently revealed to function as a circadian photoreceptor in the brain. However, its molecular properties have not been characterized yet. Here we successfully prepared a recombinant protein of Drosophila Rh7 in mammalian cultured cells. Drosophila Rh7 bound both 11-cis-retinal and 11-cis-3-hydroxyretinal to form photo-pigments which can absorb UV light. Irradiation with UV light caused formation of a visible-light absorbing metarhodopsin that activated Gq-type of G protein. This state could be photoconverted back to the original state and, thus Rh7 is a Gq-coupled bistable pigment. Interestingly, Rh7 (lambda max = 350 nm) exhibited an unusual broad spectrum with a longer wavelength tail reaching 500 nm, whose shape is like a composite of spectra of two pigments. In contrast, replacement of lysine at position 90 with glutamic acid caused the formation of a normal-shaped absorption spectrum with maximum at 450 nm. Therefore, Rh7 is a unique photo-sensor that can cover a wide wavelength region by a single pigment to contribute to non-visual photoreception.
PLOS ONE | 2016
Mutsuko Kato; Takashi Sugiyama; Kazumi Sakai; Takahiro Yamashita; Hirofumi Fujita; Keita Sato; Sayuri Tomonari; Yoshinori Shichida; Hideyo Ohuchi
Opsin family genes encode G protein-coupled seven-transmembrane proteins that bind a retinaldehyde chromophore in photoreception. Here, we sought potential as yet undescribed avian retinal photoreceptors, focusing on Opsin 3 homologs in the chicken. We found two Opsin 3-related genes in the chicken genome: one corresponding to encephalopsin/panopsin (Opn3) in mammals, and the other belonging to the teleost multiple tissue opsin (TMT) 2 group. Bioluminescence imaging and G protein activation assays demonstrated that the chicken TMT opsin (cTMT) functions as a blue light sensor when forced-expressed in mammalian cultured cells. We did not detect evidence of light sensitivity for the chicken Opn3 (cOpn3). In situ hybridization demonstrated expression of cTMT in subsets of differentiating cells in the inner retina and, as development progressed, predominant localization to retinal horizontal cells (HCs). Immunohistochemistry (IHC) revealed cTMT in HCs as well as in small numbers of cells in the ganglion and inner nuclear layers of the post-hatch chicken retina. In contrast, cOpn3-IR cells were found in distinct subsets of cells in the inner nuclear layer. cTMT-IR cells were also found in subsets of cells in the hypothalamus. Finally, we found differential distribution of cOpn3 and cTMT proteins in specific cells of the cerebellum. The present results suggest that a novel TMT-type opsin 3 may function as a photoreceptor in the chicken retina and brain.
computer software and applications conference | 2015
Tomotaka Maeda; Hiroki Nakano; Naoyuki Morimoto; Kazumi Sakai; Yasuo Okabe
We have designed and implemented an on-demand home power management system for saving electric power consumption reliably and systematically without affecting our Quality of Life. The system is based on protocol hierarchy composed of the request/response layer, the path control layer, and the physical layer. Based on the layered protocol architecture, it becomes possible to treat power allocation, power flow setting, and power transmission separately. This makes the on-demand power management system flexibly extensible. In this paper, we describe a use case of our system for power management at a single home, and show how power is saved with least degradation of the Quality of Life in experiments done in a demonstration house.
Communications Biology | 2018
Keita Sato; Takahiro Yamashita; Keiichi Kojima; Kazumi Sakai; Yuki Matsutani; Masataka Yanagawa; Yumiko Yamano; Akimori Wada; Naoyuki Iwabe; Hideyo Ohuchi; Yoshinori Shichida
Pinopsin is the opsin most closely related to vertebrate visual pigments on the phylogenetic tree. This opsin has been discovered among many vertebrates, except mammals and teleosts, and was thought to exclusively function in their brain for extraocular photoreception. Here, we show the possibility that pinopsin also contributes to scotopic vision in some vertebrate species. Pinopsin is distributed in the retina of non-teleost fishes and frogs, especially in their rod photoreceptor cells, in addition to their brain. Moreover, the retinal chromophore of pinopsin exhibits a thermal isomerization rate considerably lower than those of cone visual pigments, but comparable to that of rhodopsin. Therefore, pinopsin can function as a rhodopsin-like visual pigment in the retinas of these lower vertebrates. Since pinopsin diversified before the branching of rhodopsin on the phylogenetic tree, two-step adaptation to scotopic vision would have occurred through the independent acquisition of pinopsin and rhodopsin by the vertebrate lineage.Sato et al. show that pinopsin, an extraocular opsin, is also expressed in a subpopulation of retinal photoreceptor cells in lower vertebrates. Its retinal expression coupled to its low thermal isomerization rate suggests that pinopsin can function as a visual pigment and provides some insights into the evolution of scotopic vision in vertebrates.