Keiko Murakami

Permeabilization of yeast cells: Application to study on the regulation of AMP deaminase activity in situ

Abstract A permeabilization method which allows the assay of several intracellular enzymes within the boundaries of the yeast cell wall is described. Toluene treatment was found to make yeast cells completely permeable to exogenous substrates, and intracellular enzymes did not leak out of the treated cells. This method was also compared with the permeabilization techniques reported previously. Electron microscopic examination of toluene-treated cells indicated that they were essentially intact. The kinetic properties of AMP deaminase, examined in the permeabilized cells, including allosteric regulation by polyamine and Zn2+, suggest some differences in protein interactions for AMP deaminase in situ and in vitro.

In situ studies on AMP deaminase as a control system of the adenylate energy charge in yeasts.

The role of AMP deaminase reaction in the stabilization of the adenylate energy charge was investigated using permeabilized yeast cells. The addition of Pi or Zn2+, which inhibits AMP deaminase, remarkably retarded the depletion of total adenylate pool and the recovery of the adenylate energy charge. Polyamine, an activator of the enzyme, decreased total adenylates, resulting in the enhanced recovery of the energy charge in situ. AMP deaminase can act as a regulatory enzyme in the system that stabilizes the adenylate energy charge in yeast cells under the conditions of severe metabolic stress.

AMP deaminase from baker's yeast. Purification and some regulatory properties

AMP deaminase (AMP aminohydrolase, EC 3.5.4.6) was found in extract of bakers yeast (Saccharomyces cerevisiae), and was purified to electrophoretic homogeneity using phosphocellulose adsorption chromatography and affinity elution by ATP. The enzyme shows cooperative binding of AMP (Hill coefficient, nH, 1.7) with an s0.5 value of 2.6 mM in the absence or presence of alkali metals. ATP acts as a positive effector, lowering nH to 1.0 and s0.5 to 0.02 mM. P1 inhibits the enzyme in an allosteric manner: s0.5 and nH values increase with increase in Pi concentration. In the physiological range of adenylate energy charge in yeast cells (0.5 to 0.9), the AMP deaminase activity increases sharply with decreasing energy charge, and the decrease in the size of adenylate pool causes a marked decrease in the rate of the deaminase reaction. AMP deaminase may act as a part of the system that protects against wide excursions of energy charge and adenylate pool size in yeast cells. These suggestions, based on the properties of the enzyme observed in vitro, are consistent with the results of experiments on bakers yeast in vivo reported by other workers.

Role of cations in the regulation of baker's yeast AMP deaminase

The effect of polyamines and divalent cations including alkaline earth metals and transition metals on the AMP deaminase (AMP aminohydrolase EC 3.5.4.6) purified from bakers yeast was investigated. (1) Polyamines and alkaline earth metals activated the enzyme in the absence of ATP: these cations largely enhanced the maximal velocity without alteration of S0.5 and nH (Hill coefficient) values. However, transition metals acted as potent inhibitors, which decreased the maximal velocity of the enzyme in the absence of ATP. (2) All of the divalent cations showed an activation of the enzyme in the presence of ATP, followed by a progressive decrease in activity as the concentrations of transition metals increased. (3) The increase in the concentrations of polyamines or alkaline earth metals showed no more activating effect when the enzyme was fully activated by the addition of excess alkali metals in the absence of ATP, but divalent cation-activation was observed in the presence of ATP even if alkali metals were saturating. These results suggest the presence of two types of binding sites for cations: 1, the sites for free cations and 2, those for ATP-metal complexes. The former sites include the activating sites for alkali metals, polyamines and free alkaline earth metals, and the inhibitory sites for free transition metals. The latter sites are the activating sites for ATP-metal complexes, which are suggested to be commonly occupied by alkaline earth metals and transition metals and to form an ATP bridge (E-ATP-M) complex.

AMP deaminase from spinach leaves purification and some regulatory properties

Simmary AMP deaminase (EC 3.5.4.6) was found to be present in particulate and cytosol fractions obtained from spinach leaf extracts. The cytosol AMP deaminase was partially purified by fractionation with ammonium sulfate and phosphocellulose chromatography. The enzyme is specific for AMP as substrate, and shows cooperative binding of AMP (Hill coefficient, nH = 1.6) with S0.5 values of 10 mM. ATP and alkali metals act as positive effectors, lowering nH to 1.0 and S0.5 to 0.25 and 2 mM, respectively. Pi inhibits the enzyme in an allosteric manner. Kinetic properties of AMP deaminase suggest that the enzyme is in the activated state under physiological conditions, and may be regulated by changes in AMP and Pi concentrations. The occurrence and regulatory properties of AMP deaminase in spinach leaves could account for changes in adenine nucleotide levels during photosynthesis in leaf cells.

The role of polyamines in the regulation of AMP deaminase isozymes

The differential effects of polyamines on the activity of AMP deaminase isozyme A (from rat muscle) and isozyme B (from rat liver) are reported. Polyamines activate isozyme B but inhibit isozyme A.

Polyamines as activators of AMP nucleosidase fromAzotobacter vinelandii

Polyamines at physiological concentrations activate AMP nucleosidase fromAzotobacter vinelandii. Biological significance of the activation is discussed in relation to the control of adenylate energy charge and the purine nucleotide synthesis in prokaryotes.

Stimulation of anaerobic metabolism in rats at high altitude hypoxia—adrenergic effects dependent on dietary states

1. Plasma lactate and pyruvate were increased more markedly in fed rats than in fasted rats exposed to an 8000 m altitude. 2. The increase in plasma lactate and pyruvate was enhanced and inhibited by the alpha 1-adrenergic antagonist prazosin and the beta-blocker propranolol, respectively, in fasted rats exposed to an 8000 m altitude. Blood glucose was not changed by adrenergic blockades under the same conditions. 3. Prazosin and propranolol showed no effect on glycolytic metabolites in plasma in fed rats submitted to an 8000 m altitude. Blood glucose of fed rats was increased by alpha 1-blockade during severe hypoxia. 4. In fasted rats whose energy metabolism depends on oxidation mainly, alpha 1- and beta-adrenergic receptors can participate in the stimulation of respiration and the glycogen degradation, respectively, during an exposure to severe hypoxia. In fed rats energy metabolism depends on glycolysis, which utilizes blood glucose as the substrate preferentially during hypoxia.

Effects of monovalent cations on AMP nucleosidase from Azotobacter vinelandii

The effect of monovalent cations on the purified AMP nucleosidase (AMP phosphoribohydrolase, EC 3.2.2.4) from Azotobacter vinelandii was investigated. All the monovalent cations were activators of the enzyme: Rb+ and Cs+ were the most effective, followed by K+, Na+, NH4+ and Li+ in that order. The apparent Ka for MgATP and nH values (Hills interaction coefficient) decreased from 0.9 to 0.1 mM, and from 4 to 1, respectively, with the increase in K+ concentration, suggesting that the cation effects are on MgATP binding rather than catalysis. Gel filtration studies have revealed that the enzyme forms a non-dissociable enzyme species with a Stokes radius of 6.0--6.2 nm in the presence of saturating concentrations of monovalent cations, which can be distinguished from the 5.5-nm enzyme species showing temperature-dependent dissociation of the molecule in sulfate or phosphate. These results suggest that these ligands affect the association of the subunits through changes in the environment of the hydrophobic side chains of the enzyme molecules.

Ion-dependent activation of AMP nucleosidase from Azotobacter vinelandii

The effect of divalent cations on the purified AMP nucleosidase (AMP phosphoribohydrolase, EC 3.2.2.4) from Azotobacter vinelandii was investigated. All alkaline earth metal-ATP complexes were essential activators of the enzyme, and free alkaline earths also activated the enzyme in an allosteric manner: the apparent Ka for ATP and nH values (Hill interaction coefficient) decreased from 0.45 to 0.05 mM, and from 4 to 2, respectively, with increase in Mg2+ concentration. Transition metal-ATP complex also activated AMP nucleosidase, but a potent activation of the enzyme was followed by a progressive decrease in activity as the concentrations of transition metals increase. The enzyme fully activated in the presence of Mg2+ was inhibited by the higher concentrations of transition metals with the identical I0.5 values when Mg2+ was present. These results suggest the presence of two classes of binding sites for divalent cations. One is the activating site for ATP-metal complex, which is suggested to be commonly occupied by alkaline earths and transition metals. The other sites are those for free metal binding, the sites for free alkaline earths and free transition metals are activating and inhibitory sites, respectively.