Keitaro Yoshimoto

Direct Observation of Adsorption-Induced Inactivation of Antibody Fragments Surrounded by Mixed-PEG Layer on a Gold Surface

To examine the adsorption behavior of antibody fragments (Fab) directly immobilized on a gold surface through S-Au linkage, analyses by surface plasmon resonance (SPR), fluorometry, and atomic force microscopy (AFM) with an excellent blocking technique by the consecutive treatments of longer-poly(ethylene glycol) (PEG) (MW = 5k) and shorter-PEG (MW = 2k), abbreviated as mixed-PEG layer formation, were performed. The results of the SPR analysis suggest that the adsorption-induced inactivation of the antigen-binding activity of Fab took place gradually on the gold surface, where the activity disappeared almost completely at 60 min after Fab immobilization. In contrast, in the case of Fab coimmobilized by the mixed-PEG layer, 70% of the initial antigen-binding activity of the Fab was retained even 60 min after the construction of the hybrid surface. Using fluorescein-labeled Fab (FL-Fab), fluorescence measurement of the constructed surface was carried out. The fluorescence of the FL-Fab without any blocking agent on the gold surface was gradually quenched and finally decreased to 40% of the initial intensity 60 min after Fab immobilization. The decrease in the fluorescence intensity is considered to be caused by the change in the distance between the fluorophores labeled on the Fab and the gold surface, due to the energy transfer from the fluorophores to the gold surface. In contrast, 75% of the initial intensity was observed on the Fab/mixed-PEG coimmobilized surface. The results obtained from the SPR and fluorometric analyses correlated well with each other; thus, the surface-induced inactivation of the antigen-binding functionality was presumably due to the conformational and/or orientation change of Fab on the gold surface. AFM studies provided direct information on the time-dependent decrease in the height of the immobilized Fab on the gold surface. In contrast, the coimmobilization of densely packed mixed-PEG tethered chains around the Fab on the gold surface suppressed the decrease in the height of Fab, presumably indicating that the conformational and/or orientation change of Fab was suppressed by the coimmobilized mixed-PEG layer. The new findings obtained in this study are expected to be useful for the improvement of the antibody fragment method and, thus, for the construction of high-performance immuno-surfaces.

Influence of substituent modifications on the binding of 2-amino-1,8-naphthyridines to cytosine opposite an AP site in DNA duplexes: thermodynamic characterization

Here, we report on a significant effect of substitutions on the binding affinity of a series of 2-amino-1,8-naphthyridines, i.e., 2-amino-1,8-naphthyridine (AND), 2-amino-7-methyl-1,8-naphthyridine (AMND), 2-amino-5,7-dimethyl-1,8-naphthyridine (ADMND) and 2-amino-5,6,7-trimethyl-1,8-naphthyridine (ATMND), all of which can bind to cytosine opposite an AP site in DNA duplexes. Fluorescence titration experiments show that the binding affinity for cytosine is effectively enhanced by the introduction of methyl groups to the naphthyridine ring, and the 1:1 binding constant (106 M−1) follows in the order of AND (0.30) < AMND (2.7) < ADMND (6.1) < ATMND (19) in solutions containing 110 mM Na+ (pH 7.0, at 20°C). The thermodynamic parameters obtained by isothermal titration calorimetry experiments indicate that the introduction of methyl groups effectively reduces the loss of binding entropy, which is indeed responsible for the increase in the binding affinity. The heat capacity change (ΔCp), as determined from temperature dependence of the binding enthalpy, is found to be significantly different between AND (−161 cal/mol K) and ATMND (−217 cal/mol K). The hydrophobic contribution appears to be a key force to explain the observed effect of substitutions on the binding affinity when the observed binding free energy (ΔGobs) is dissected into its component terms.

Non-Fouling Character of Poly[2-(methacryloyloxy)ethyl Phosphorylcholine]-Modified Gold Surfaces Fabricated by the 'Grafting to' Method: Comparison of its Protein Resistance with Poly(ethylene glycol)-Modified Gold Surfaces.

Poly[2-(methacryloyloxy)ethyl phosphorylcholine] -modified gold surfaces, which have been newly prepared by a grafting to method using a series of monosulfanyl-terminated PMPC, are characterized by protein adsorption experiments based on surface plasmon resonance spectroscopy and ellipsometry measurements. The extent of BSA adsorption on PMPC-modified surfaces was systematically reduced for thicker PMPC layers, thus the number of MPC units on the gold surface appears to be an important factor for the excellent protein resistance offered by PMPC-modified gold surfaces fabricated by the grafting to method, which is sharp contrast to that of PEG tethered chains.

Completely Dispersible PEGylated Gold Nanoparticles under Physiological Conditions : Modification of Gold Nanoparticles with Precisely Controlled PEG-b-polyamine

A novel water-soluble, biocompatible polymer, poly(ethylene glycol)-block-poly((2-N,N-dimethylamino)ethyl methacrylate) (PEG-b-PAMA), possessing controlled molecular weight with a narrow molecular weight distribution, was synthesized by the atom-transfer radical polymerization (ATRP) method. PEG-b-PAMA having a short PAMA chain length was successfully synthesized under suitable polymerization conditions. Gold nanoparticles (GNPs) were modified using PEG-b-PAMA prepared under a variety of PEGylation conditions. Under alkaline conditions (pH >10) and an [N]/[GNP] ratio of more than 3300, the PEGylated GNPs (PEG-GNPs) showed complete dispersion stability, avoiding coagulation. The amino groups of the PAMA segment of the block copolymers were completely deprotonated above pH 10. This means that PEG-b-PAMA interacted with the GNP surface via multipoint coordination of the tertiary amino groups of PAMA, not electrostatically. The effect of the number of amino groups in the PAMA segment on GNP surface modifications was investigated by zeta potential and dynamic light scattering (DLS) measurements. When the PEG-GNPs were prepared in excess polymer solution, almost the same diameter was observed regardless of the PAMA chain length. After the PEG-GNPs were purified by centrifugation, the zeta potentials of all PEG-GNPs were shielded to almost 0 mV, indicating the effective modifications of the GNP surface by PEG-b-PAMA regardless of the chain length. However, the particle size and particle size distribution of the purified PEG-GNPs were strongly affected by the PAMA chain length. PEG-GNPs with longer PAMA segments underwent coagulation after purification, whereas PEG-GNPs with shorter PAMA segments increased their dispersion stability. The experimental results of the thermal gravimetric analysis confirmed that the PEG density on the GNP surface increased as the AMA units decreased to 3. Thus, the dispersion stability depended significantly on the PEG density on the GNP surface. GNPs modified with PEG-b-PAMA having short AMA units showed excellent dispersion stability under a variety of pH conditions. The excellent dispersion stability of the obtained PEG-GNP was also confirmed both in bovine serum albumin (BSA) solution and 95% human serum.

Creation of a mixed poly(ethylene glycol) tethered-chain surface for preventing the nonspecific adsorption of proteins and peptides

Using a heterotelechelic poly(ethylene glycol) (PEG) possessing a mercapto group at one end and an acetal group at the other end (acetal-PEG-SH), the authors constructed a reactive PEG tethered-chain surface on a surface plasmon sensor (SPR) gold chip for biosensing with high sensitivity. Nonspecific bovine serum albumin adsorption on the PEG tethered-chain surface was significantly influenced by the density of the PEG chain, and was almost completely suppressed by increasing the PEG density through the repetitive treatment of the chip surface with acetal-PEG-SH. The PEG density was increased even more by adding an underbrushed layer made of shorter-PEG-SH-chain molecules (2 kDa, hereafter 2k) to the surface made of longer-PEG-SH-chain molecules (5 kDa, hereafter 5k). SPR measurement then gave an estimate of the adsorption of a series of proteins with varying sizes and isoelectric points on the PEG chain surface having an underbrushed layer (PEG5k/2k surface). As compared to other SPR surfaces, viz., a commercial carboxymethyl dextran and conventional PEG5k tethered-chain surface without an underbrushed layer, the mixed PEG5k/2k surface showed almost complete inhibition of the nonspecific adsorption not only of high-molecular-weight proteins but also of low-molecular-weight peptides.

Regulation of lysozyme activity based on thermotolerant protein/smart polymer complex formation.

Proteins have evolved to acquire highly specialized biological functions and are ideal for various applications in both medicine and biotechnology, although denaturation is one of the major problems in protein chemistry. Here, we show a novel strategy for the regulation and preservation of the enzymatic activity even after heat treatment by the complex formation with a cationic smart copolymer, poly(N,N-diethylaminoethyl methacrylate)-graft-poly(ethylene glycol) (PEAMA-g-PEG). PEAMA-g-PEG suppressed the enzymatic activity of lysozyme completely without any conformational change, indicating complex formation and the capping of the active site of lysozyme by PEAMA-g-PEG. The addition of an anionic polymer, poly(acrylic acid) (PAAc), recovered the inhibited enzymatic activity of the lysozyme/PEAMA-g-PEG complex completely. Surprisingly, even after heating the lysozyme with PEAMA-g-PEG for 20 min at 98 degrees C, the addition of PAAc recovered 80% enzymatic activity of lysozyme. Circular dichroism (CD) spectral analysis clearly indicated that the irreversible inactivation of lysozyme induced by the heat treatment was suppressed by the complex formation with PEAMA-g-PEG.

Inverted pattern formation of cell microarrays on poly(ethylene glycol) (PEG) gel patterned surface and construction of hepatocyte spheroids on unmodified PEG gel microdomains

We present herein the novel technique for constructing inverted cell-adhesion patternes on PEG gel modified glass surfaces by photoirradiation using the same photomask and materials. The PEG gel micropatterns were prepared by a photolithographic technique using a photomask with 100 microm aligned cavities after spin-coating of a mixed solution of alpha,omega-dimethacryloyl-PEG (PEG-DMA) and a photoinitiator on glass surfaces. When methanol was used as a casting solvent for the spin-coating (Method A), the circular PEG gel domains with a diameter of 100 microm were fabricated on the surface, and as would be predicted, seeded bovine aortic endothelial cells (BAECs) adhered to the glass area on the constructed surface to form a BAECs sheet with 100 microm aligned cavity. In contrast, it was rather surprising for us that a complete inverted cell pattern was formed when the PEG gel pattern surface was prepared using methanol/water co-solvent (Method B). Furthermore, when hepatoma cancer cells were seeded on the constructed surface prepared by Method B, they formed a spherical multicellular aggregate (spheroid) on the unmodified PEG gel domains without feeder cells. In order to obtain information on this peculiar phenomenon, fluorescence-based protein adsorption experiments, contact angle measurements, and X-ray photospectroscopy (XPS) analysis were carried out.

Hydrogen-bond forming ionophore for highly efficient transport of phosphate anions across the nitrobenzene–water interface

Thiourea-based hydrogen-bond forming ionophore 2, alpha,alpha-bis(N-p-nitrophenylthioureylene)-m-xylene, is synthesized and investigated by using ion transfer polarography for the facilitated transfers of H2PO4-, HPO42- and Cl- across the nitrobenzene-water interface. Bis-thiourea 2 has a significant ability to assist H2PO4- transfer across the interface whereas its counterpart, N-(p-nitrophenyl)-N-propylthiourea (ionophore 3), cannot facilitate the transfer of this hydrophilic anion. The H2PO4- transfer assisted by 2 is based on the formation of a 2:1 complex between H2PO4- and ionophore, and the transfer reaction is more stable by over -12 kJ mol(-1) than the case of 3. The stabilization of the H2PO4- transfer for 2 is even stronger by -11 kJ mol(-1) than that for bis-thiourea 1, 2,7-di-t-butyl-4,5-bis(N-butylthioureylene)-9,9-dimethylxanthene, which forms a 1:1 complex through the formation of four hydrogen bonds. Bis-thiourea 2 is also able to facilitate transfers of HPO42- and Cl- by the formation of 1:1 complex. As compared to bis-thiourea 1, HPO42- transfer by 2 is significantly stabilized by -27 to -31 kJ mol(-1) while the stabilization of the Cl- transfer is relatively moderate (-6.1 kJ mol(-1)). These binding properties of bis-thiourea 2 are discussed for the design of phosphate-selective ionophores for use in two-phase distribution systems such as ion-selective electrodes.

Fluorescence detection of guanine–adenine transition by a hydrogen bond forming small compound

In combination with abasic site-containing oligodeoxynucleotides, 2-amino-4-oxopteridine (pterin) can selectively recognize guanine base over other nucleobases accompanied by fluorescence quenching, which allows clear detection of a guanine-adenine transition with the naked eye.

High-Performance Immunolatex Possessing a Mixed-PEG/Antibody Coimmobilized Surface: Highly Sensitive Ferritin Immunodiagnostics

To create a high-performance immunoassay system based on a nanosphere/antibody complex, pentaethylenehexamine-ended poly(ethylene glycol), N6-PEG comprising N6-PEG-5k (M(n) = 6000 g/mol) and N6-PEG-2k (M(n) = 2000 g/mol) was employed as a novel blocking agent to modify the surface of nanospheres. Both the antibody (antiferritin) and the N6-PEG were covalently bonded onto the nanospheres by the linkage of their amino groups with the activated carboxyl groups of those particles. The quantification of antiferritin and tethered N6-PEG polymer was carried out using the copper reduction/bicinchoninic acid reaction (the Micro BCA method). Dynamic-light-scattering (DLS) and electrophoretic mobility (mu(e)) measurements were performed to characterize the nanosphere/antiferritin/N6-PEG complex, which was prepared under various conditions. Simultaneously, the immune response of the complex obtained in this manner was measured by the turbidimetric monitoring method in phosphate buffer (10 mM, pH = 7.4). On the basis of all the results, the optimum conditions for preparing an acceptable nanosphere/antiferritin/N6-PEG complex were determined. Interestingly, compared to the blocking treatment with bovine serum albumin (BSA), which is a well-known blocking agent, surface modification with N6-PEG, especially that using a mixture of N6-PEG-5k and N6-PEG-2k, improved the performance (increased immune response yield and decreased detection limit) of the nanosphere/antiferritin complex to a remarkable degree in both phosphate buffer and 100% fetal bovine serum (FBS), thus significantly demonstrating the potential of the nanosphere/antibody/mixed-PEG complex as central to a high-performance immunoassay system.