Kendra D. Nyberg
University of California, Los Angeles
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Publication
Featured researches published by Kendra D. Nyberg.
Integrative Biology | 2016
Angelyn V. Nguyen; Kendra D. Nyberg; Michael B. Scott; Alia M. Welsh; Andrew H. Nguyen; Nanping Wu; Sophia V. Hohlbauch; Nicholas A. Geisse; Ewan A. Gibb; A. Gordon Robertson; Timothy R. Donahue; Amy C. Rowat
Metastasis is a fundamentally physical process in which cells are required to deform through narrow gaps as they invade surrounding tissues and transit to distant sites. In many cancers, more invasive cells are more deformable than less invasive cells, but the extent to which mechanical phenotype, or mechanotype, can predict disease aggressiveness in pancreatic ductal adenocarcinoma (PDAC) remains unclear. Here we investigate the invasive potential and mechanical properties of immortalized PDAC cell lines derived from primary tumors and a secondary metastatic site, as well as noncancerous pancreatic ductal cells. To investigate how invasive behavior is associated with cell mechanotype, we flow cells through micron-scale pores using parallel microfiltration and microfluidic deformability cytometry; these results show that the ability of PDAC cells to passively transit through pores is only weakly correlated with their invasive potential. We also measure the Youngs modulus of pancreatic ductal cells using atomic force microscopy, which reveals that there is a strong association between cell stiffness and invasive potential in PDAC cells. To determine the molecular origins of the variability in mechanotype across our PDAC cell lines, we analyze RNAseq data for genes that are known to regulate cell mechanotype. Our results show that vimentin, actin, and lamin A are among the most differentially expressed mechanoregulating genes across our panel of PDAC cell lines, as well as a cohort of 38 additional PDAC cell lines. We confirm levels of these proteins across our cell panel using immunoblotting, and find that levels of lamin A increase with both invasive potential and Youngs modulus. Taken together, we find that stiffer PDAC cells are more invasive than more compliant cells, which challenges the paradigm that decreased cell stiffness is a hallmark of metastatic potential.
Open Biology | 2016
Clara K. Chan; Yinghong Pan; Kendra D. Nyberg; Marco A. Marra; Emilia L. Lim; Steven J.M. Jones; Dianna Maar; Ewan A. Gibb; Preethi H. Gunaratne; A. Gordon Robertson; Amy C. Rowat
The activities of pathways that regulate malignant transformation can be influenced by microRNAs (miRs). Recently, we showed that increased expression of five tumour-suppressor miRs, miR-508-3p, miR-508-5p, miR-509-3p, miR-509-5p and miR-130b-3p, correlate with improved clinical outcomes in human ovarian cancer patients, and that miR-509-3p attenuates invasion of ovarian cancer cell lines. Here, we investigate the mechanism underlying this reduced invasive potential by assessing the impact of these five miRs on the physical properties of cells. Human ovarian cancer cells (HEYA8, OVCAR8) that are transfected with miR mimics representing these five miRs exhibit decreased invasion through collagen matrices, increased cell size and reduced deformability as measured by microfiltration and microfluidic assays. To understand the molecular basis of altered invasion and deformability induced by these miRs, we use predicted and validated mRNA targets that encode structural and signalling proteins that regulate cell mechanical properties. Combined with analysis of gene transcripts by real-time PCR and image analysis of F-actin in single cells, our results suggest that these tumour-suppressor miRs may alter cell physical properties by regulating the actin cytoskeleton. Our findings provide biophysical insights into how tumour-suppressor miRs can regulate the invasive behaviour of ovarian cancer cells, and identify potential therapeutic targets that may be implicated in ovarian cancer progression.
Advances in Physiology Education | 2015
Larissa Zhou; Kendra D. Nyberg; Amy C. Rowat
Diffusion is critical to physiological processes ranging from gas exchange across alveoli to transport within individual cells. In the classroom, however, it can be challenging to convey the concept of diffusion on the microscopic scale. In this article, we present a series of three exercises that use food and cooking to illustrate diffusion theory and Ficks first law. These exercises are part of a 10-wk undergraduate course that uses food and cooking to teach fundamental concepts in physiology and biophysics to students, including nonscience majors. Consistent demonstration of practical applications in a classroom setting has the potential to fundamentally change how students view the role of science in their lives (15).
Lab on a Chip | 2016
Kendra D. Nyberg; Michael B. Scott; Samuel L. Bruce; Ajay B. Gopinath; Dimitri Bikos; Thomas G. Mason; Jin Woong Kim; Hong Sung Choi; Amy C. Rowat
Biophysical Journal | 2017
Kendra D. Nyberg; Kenneth H. Hu; Sara H. Kleinman; Damir B. Khismatullin; Manish J. Butte; Amy C. Rowat
Soft Matter | 2017
Arthur A. Evans; Elliott Cheung; Kendra D. Nyberg; Amy C. Rowat
Integrative Biology | 2018
Kendra D. Nyberg; Samuel L. Bruce; Angelyn V. Nguyen; Clara K. Chan; Navjot Kaur Gill; Tae-Hyung Kim; Erica K. Sloan; Amy C. Rowat
Biophysical Journal | 2018
Navjot Kaur Gill; Kendra D. Nyberg; Dongping Qi; Bobby Tofiq; Robert Damoiseaux; Amy C. Rowat
Protocol exchange | 2017
Navjot Kaur Gill; Dongping Qi; Tae-Hyung Kim; Clara S. Chan; Angelyn Nguyen; Kendra D. Nyberg; Amy C. Rowat
Archive | 2016
Larissa Zhou; Kendra D. Nyberg; Amy C. Rowat