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Dive into the research topics where Kenichi Kokubo is active.

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Featured researches published by Kenichi Kokubo.


Oncogene | 2010

Potential utility of HOP homeobox gene promoter methylation as a marker of tumor aggressiveness in gastric cancer.

Akira Ooki; Keishi Yamashita; Shiro Kikuchi; Shinichi Sakuramoto; Natsuya Katada; Kenichi Kokubo; Hirosuke Kobayashi; Myoung Sook Kim; David Sidransky; Masahiko Watanabe

HOP homeobox (HOPX) is an unusual homeobox gene encoding three spliced transcript variants, among which the only HOPX-β promoter harbors CpG islands. The characteristics of its promoter methylation was analyzed using bisulfite sequencing and quantitative-methylation-specific polymerase chain reaction (Q-MSP), and the effects of HOPX expression were also examined. HOPX-β expression was silenced in all gastric cancer cell lines tested; its expression could be restored by treatment with demethylating agent. On Q-MSP, HOPX-β hypermethylation (cut-off value of 3.55) was found in 84% (67 out of 80) of primary tumor tissues and 10% (8 out of 80) of the corresponding normal tissues and could discriminate normal from tumor tissues (P<0.0001). The prognosis of the advanced cases with HOPX-β hypermethylation was as poor as those with stage IV disease when cut-off value was set at 11.28. This finding was validated in an independent cohort of 90 advanced gastric cancers. The HOPX-β hypermethylation was also an independent prognostic factor (P=0.029) on multivariate analysis. Exogenous HOPX expression significantly inhibited cell proliferation, colony formation and invasion as well as enhanced apoptosis. Taken together, HOPX-β promoter methylation is a frequent and cancer-specific event in gastric cancer. Quantitative assessment of HOPX-β methylation has great clinical potential as a marker of tumor aggressiveness.


Immunology Letters | 2012

Ectopic expression of a T-box transcription factor, eomesodermin, renders CD4+ Th cells cytotoxic by activating both perforin- and FasL-pathways

Koji Eshima; Sayuri Chiba; Harumi Suzuki; Kenichi Kokubo; Hirosuke Kobayashi; Misao Iizuka; Kazuya Iwabuchi; Nobukata Shinohara

During viral infection, CD8(+) cytotoxic T lymphocytes (CTL) play a central role to eliminate viruses by destructing virus-infected cells utilizing two cytolytic pathways, i.e., perforin/granzyme pathway and FasL-Fas pathway. It has been shown that effector functions of CTL are critically controlled by two T-box transcription factors, T-bet and eomesodermin (Eomes), although their precise activities in constructing CTL functions are not fully understood. To investigate the functional potency and activities of Eomes, the effects of ectopic expression of Eomes in two terminally differentiated murine CD4(+) Th lines, on their effector functions were analyzed. The results showed that in Eomes-transfected Th hybridoma, cell surface FasL expression upon Con A stimulation was markedly enhanced, although perforin expression was not induced. In normal, non-transformed Th2 cells, introduction of Eomes elicited perforin expression, and also augmented FasL up-regulation. Interestingly, cyotlytic activity of Eomes-transfectant was more efficient than that of perforin-transfected Th2 cells which expressed high levels of perforin and granzyme B mRNA, indicating that Eomes may play additional roles other than preparation of these cytolytic effector molecules. In contrast, stimulation-induced CD154 up-regulation, one of the typical helper T cell characteristics, was repressed in Eomes-transfectant. Collectively, these results suggest that Eomes may not only be involved in perforin/granzyme expression but also play various functions, including FasL up-regulation, to develop the characteristics of CD8(+) CTL. These studies have also suggested that introduction of Eomes alone was sufficient to convert the functions of fully differentiated Th cells toward those of CTL.


Pediatric Research | 2009

Clinical score and transcript abundance patterns identify Kawasaki disease patients who may benefit from addition of methylprednisolone.

Shohei Ogata; Yoshihito Ogihara; Keiko Nomoto; Kazumasa Akiyama; Yayoi Nakahata; Kayoko Sato; Katsunori Minoura; Kenichi Kokubo; Hirosuke Kobayashi; Masahiro Ishii

Intravenous immunoglobulin (IVIG) treatment-resistant patients are high risk of developing coronary artery lesions with Kawasaki disease. The IVIG-responsive (Group A; n = 6) and IVIG-resistant patients (Group B) were predicted before starting the initial treatment using the Egami scoring system and randomly allocated as a single-IVIG treatment group (group B1; n = 6) or as a IVIG-plus-methylprednisolone (IVMP) combined therapy group (group B2; n = 5). We investigated the transcript abundance in the leukocytes of those patients using a microarray analysis. Five patients in group A and one patient in group B1 responded to initial IVIG treatment. All group B2 patients responded to IVIG-plus-IVMP combined therapy. Before performing these treatments, those transcripts related to IVIG resistance and to the development of coronary artery lesions, such as IL1R, IL18R, oncostatin M, suppressor of cytokine signaling-3, S100A12 protein, carcinoembryonic antigen-related cell adhesion molecule-1, matrix metallopeptidase-9, and polycythemia rubra vera-1, were more abundant in group B patients in comparison with group A patients. Moreover, those transcripts in group B2 patients were more profoundly and broadly suppressed than group B1 patients after treatment. This study elucidated the molecular mechanism of the effectiveness of IVIG-plus-IVMP combined therapy.


Respiratory Physiology & Neurobiology | 2009

Low frequency oscillometry parameters in COPD patients are less variable during inspiration than during expiration

Masaru Kubota; Gakuji Shirai; Tomoyuki Nakamori; Kenichi Kokubo; Noriyuki Masuda; Hirosuke Kobayashi

Impulse oscillometry (IOS) is a forced oscillation technique that enables pulmonary functional studies to be performed without requiring strenuous maneuvers. IOS assesses different components of respiratory impedance. The aim of this study was to compare the inspiratory and expiratory IOS parameters in COPD patients. IOS and spirometry were performed in 15 COPD patients and 23 healthy subjects. Thereafter, COPD patients were treated with tiotropium and their pulmonary function was re-evaluated. In COPD patients, the variations in the IOS parameters were significantly larger during expiration than during inspiration. The improvement in R5-20 (the difference between the respiratory resistance at 5 and 20 Hz, which reflects the distal lung resistance) after tiotropium treatment was statistically detected only during inspiration (p=0.008), not during expiration (p=0.139). In conclusion, the expiratory IOS parameters varied more than the inspiratory parameters, particularly in COPD patients-possibly because of flow-limitation during expiration. Thus, the evaluation of IOS parameters may be more accurate during inspiration in COPD patients.


Pacing and Clinical Electrophysiology | 2005

Electromagnetic Interference of Implantable Unipolar Cardiac Pacemakers by an Induction Oven

Minoru Hirose; Mizuho Hida; Eiji Sato; Kenichi Kokubo; Masaki Nie; Hirosuke Kobayashi

Induction ovens have been reported to exert electromagnetic interference on implanted cardiac pacemakers. In an attempt to quantitatively investigate the electromagnetic interference caused by an induction oven on implantable unipolar cardiac pacemakers, we measured the distribution profile of the magnetic field intensity, both with and without a pan on the induction oven. We also performed the inhibition test and asynchronous test using four kinds of pacemakers housed in the standardized Irnich human body model, and measured the maximal distance from the induction oven up to which the interference occurred. In the pan‐detection mode of the oven in the absence of a pan, the distribution profile of the magnetic field intensity peaked at the center of the cooking plate, and during induction heating of a pan placed on the induction oven, it was the largest at the circular top‐edge of the pan. Pacemaker pulses were inhibited by the induction oven, or generated by the reversion mechanism. The maximal interference distance from the oven was 34 cm for one of the pacemakers. Thus, the safe distance from an induction oven of a patient with an implanted cardiac pacemaker is considered to be 50 cm or more. In conclusion, in the pan‐detection mode of the oven in the absence of a pan, the distribution profile of the magnetic field intensity peaked at the center of the cooking plate, and during the induction heating of a pan placed on the oven, it peaked at the circular edge of the pan. The induction oven asynchronized or generated pulses in implantable unipolar cardiac pacemakers up to a maximal distance of 34 cm from the induction oven.


Journal of Heart and Lung Transplantation | 2013

A novel method of preserving cardiac grafts using a hydrogen-rich water bath

K. Noda; Norihisa Shigemura; Yugo Tanaka; Tomohiro Kawamura; Sang Hyun Lim; Kenichi Kokubo; Timothy R. Billiar; C. Bermudez; Hirosuke Kobayashi; Atsunori Nakao

BACKGROUND Exogenously administered hydrogen exerts cytoprotective effects through anti-oxidant, anti-inflammatory, and anti-apoptotic mechanisms in various disease settings, including organ transplantation. Our objective in this study was to evaluate the efficacy of a novel cold storage device equipped with a hydrogen-rich water bath. METHODS The study used an established rat heterotopic transplantation model. Syngeneic heart grafts from elderly donors (60- to 70-week-old Lewis rats) or allografts from adult donors (12-week-old Brown Norway rats) were exposed to prolonged cold preservation. The cardiac grafts were stored in plastic bags containing Celsior, which were immersed in the cold water bath equipped with an electrolyzer to saturate the water with hydrogen. The cardiac grafts then were heterotopically engrafted into Lewis rat recipients. RESULTS In both experimental settings, serum troponin I and creatine phosphokinase were markedly elevated 3 hours after reperfusion in the control grafts without hydrogen treatment. The grafts exhibited prominent inflammatory responses, including neutrophil infiltration and the upregulation of messenger RNAs for pro-inflammatory cytokines and chemokines. Myocardial injury and inflammatory events were significantly attenuated by organ storage in the hydrogen-rich water bath. The grafts stored using the hydrogen-rich water bath also exhibited less mitochondrial damage and a higher adenosine triphosphate content. CONCLUSIONS Hydrogen delivery to cardiac grafts during cold preservation using a novel hydrogen-supplemented water bath efficiently ameliorated myocardial injury due to cold ischemia and reperfusion. This new device to saturate organs with hydrogen during cold storage merits further investigation for possible therapeutic and preventative use during transplantation.


Pacing and Clinical Electrophysiology | 2010

X‐ray Radiation Causes Electromagnetic Interference in Implantable Cardiac Pacemakers

Minoru Hirose; Keiichi Tachikawa; Masanori Ozaki; Naoki Umezawa; Toshihiro Shinbo; Kenichi Kokubo; Hirosuke Kobayashi

Background: X‐rays are not thought to cause electromagnetic interference (EMI) in implantable cardiac pacemakers. However, x‐ray radiation during computed tomography (CT) scanning has been reported to cause EMI in some implantable cardiac pacemakers. The objectives of this study were to identify the location within the pacemakers where x‐ray radiation causes EMI and to investigate the association of EMI with the x‐ray radiation conditions.


Pediatric Research | 2014

Transcriptional regulation by infliximab therapy in Kawasaki disease patients with immunoglobulin resistance.

Yoshihito Ogihara; Shohei Ogata; Keiko Nomoto; Takasuke Ebato; Kayoko Sato; Kenichi Kokubo; Hirosuke Kobayashi; Masahiro Ishii

Background:Infliximab (IFX), a known monoclonal antibody against tumor necrosis factor-α (TNF-α), is used to treat Kawasaki disease (KD) patients with intravenous immunoglobulin (IVIG) resistance. The transcriptional modulation of inflammation following IFX therapy has not been reported in KD patients.Methods:We investigated the transcript abundance profiles in whole blood obtained from eight IVIG-resistant KD subjects treated with IFX therapy using microarray platforms and compared them with those in initially IVIG-responsive subjects. A pathway analysis was performed using WikiPathways to search for the biological pathways of the transcript profiles. Four transcripts changed by IFX therapy were subsequently validated using quantitative real-time polymerase chain reaction.Results:The pathway analysis showed the reduced abundance of transcripts in the nucleotide-binding oligomerization domain, matrix metalloproteinase (MMP), and inflammatory cytokine pathways and the increased abundance of transcripts in the T-cell receptor, apoptosis, TGF-β, and interleukin-2 pathways. Additionally, the levels of four transcripts (peptidase inhibitor-3, MMP-8, chemokine receptor-2, and pentraxin-3) related to KD vasculitis and IVIG resistance decreased after IFX therapy.Conclusion:The administration of IFX was associated with both the signaling pathways of KD inflammation and several transcripts related to IVIG resistance factors. These findings provide strong theoretical support for the use of IFX in KD patients with IVIG resistance.Pediatric Research (2014); 76 3, 287–293. doi:10.1038/pr.2014.92


Cancer Medicine | 2015

Identification of EGFR expression status association with metastatic lymph node density (ND) by expression microarray analysis of advanced gastric cancer

Akira Ema; Mina Waraya; Keishi Yamashita; Kenichi Kokubo; Hirosuke Kobayashi; Keika Hoshi; Yoshiko Shinkai; Hiroshi Kawamata; Kazunori Nakamura; Hiroshi Nishimiya; Natsuya Katada; Masahiko Watanabe

Metastatic lymph node density (ND) has been reproducibly proven to be a prognostic factor in gastric cancer. The molecular mechanisms that underlie this aggressiveness are underexplored. Here, we aimed to identify molecules associated with this unique phenotype. Tumor specimens from patients with stage III gastric cancer with high or low ND (n = 4 for both) were compared at the mRNA level using Affymetrix microarray (harboring 54,675 genes). The expression data were prioritized, and genes that correlated with ND were selected. Ultimately, the EGFR was validated as such a candidate molecule in patients with primary advanced gastric cancer who underwent standard treatment (n = 167). Expression data of the microarray were prioritized based on gene expression ratio and frequency of gene expression. The first priority genes to be selected were genes that are known to be amplified in cancer, which included NKX2.1, CHST9, CTNND2, SLC25A27, FGFR2, EGFR, and PTGER1. Of these genes, the EGFR gene was of particular interest. EGFR expression in primary gastric cancer was examined using immunohistochemistry (IHC). The Students t‐test elucidated a significant difference in EGFR expression between IHC 2+/3+ and IHC 1+ according to ND (P = 0.0035). The Chi‐square test also indicated a significant difference between high and low levels of EGFR immunohistochemical staining (IHC2+/3+ and IHC1+, respectively) and ND status (P = 0.0023). According to the least squares method, as ND increased, the risk that EGFR staining levels changed from IHC 1+ to IHC 2+ also increased. In this study, we determined that high EGFR expression may underlie the aggressive mechanism of advanced gastric cancer with high ND.


Respiratory Physiology & Neurobiology | 2008

Bench study of auto-CPAP devices using a collapsible upper airway model with upstream resistance.

Minoru Hirose; Junichi Honda; Eiji Sato; Toshihiro Shinbo; Kenichi Kokubo; Toshio Ichiwata; Hirosuke Kobayashi

The aim of this study was to investigate the response of auto-CPAP devices to respiratory events (apnea, hypopnea, flow-limitation and snoring) on the same condition using a physiological upper airway model. The hypothesis of this study is that collapsibility of the flow-limiting collapsible segment of the airway is influenced by the upstream airway resistance. Five auto-CPAP devices, AutoSet T, AutoSet Spirit, Goodnight 420E, PV10i and REMstar Auto were evaluated. Apnea: all the devices increased the auto-CPAP level, while AutoSet T and AutoSet Spirit did not respond to apnea for 30s. Hypopnea: all the devices except the AutoSet T and Goodnight 420E increased pressure. Flow-limitation: all the devices except the PV10i and REMstar Auto increased pressure. Snoring: the snoring sounds disappeared when REMstar Auto and PV10i were used, and the Goodnight 420E lowered the level of snoring. In conclusion, the response of auto-CPAP devices to respiratory events differed. Collapsible upper airway model with upstream resistance is useful for the first-step assessment of auto-CPAP devices.

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