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Dive into the research topics where Kenneth H. Aoki is active.

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Featured researches published by Kenneth H. Aoki.


Nature | 1998

Efficiency of signalling through cytokine receptors depends critically on receptor orientation

Rashid Syed; Scott W. Reid; Cuiwei Li; Janet Cheetham; Kenneth H. Aoki; Beishan Liu; Hangjun Zhan; Timothy D. Osslund; Arthur J. Chirino; Jiandong Zhang; Janet Finer-Moore; Steven Elliott; Karen C. Sitney; Bradley A. Katz; David J. Matthews; John J. Wendoloski; Joan C. Egrie; Robert M. Stroud

Human erythropoietin is a haematopoietic cytokine required for the differentiation and proliferation of precursor cells into red blood cells. It activates cells by binding and orientating two cell-surface erythropoietin receptors (EPORs) which trigger an intracellular phosphorylation cascade. The half-maximal response in a cellular proliferation assay is evoked at an erythropoietin concentration of 10 pM (ref. 3), 10−2 of its K d value for erythropoietin–EPOR binding site 1 (Kd ≈ 1 nM), and 10−5 of the K d for erythropoietin–EPOR binding site 2 (Kd ≈ 1 μM). Overall half-maximal binding (IC50) of cell-surface receptors is produced with ∼0.18 nM erythropoietin, indicating that only ∼6% of the receptors would be bound in the presence of 10 pM erythropoietin. Other effective erythropoietin-mimetic ligands that dimerize receptors can evoke the same cellular responses, but much less efficiently, requiring concentrations close to their K d values (∼0.1 μM). The crystal structure of erythropoietin complexed to the extracellular ligand-binding domains of the erythropoietin receptor, determined at 1.9 Å from two crystal forms, shows that erythropoietin imposes a unique 120° angular relationship and orientation that is responsible for optimal signalling through intracellular kinase pathways.


Nature Structural & Molecular Biology | 1998

NMR structure of human erythropoietin and a comparison with its receptor bound conformation.

Janet Cheetham; Duncan M. Smith; Kenneth H. Aoki; Janice L. Stevenson; Thomas J. Hoeffel; Rashid Syed; Joan C. Egrie; S Timothy Harvey.

The solution structure of human erythropoietin (EPO) has been determined by nuclear magnetic resonance spectroscopy and the overall topology of the protein is revealed as a novel combination of features taken from both the long-chain and short-chain families of hematopoietic growth factors. Using the structure and data from mutagenesis studies we have elucidated the key physiochemical properties defining each of the two receptor binding sites on the EPO protein. A comparison of the NMR structure of the free EPO ligand to the receptor bound form, determined by X-ray crystallography, reveals conformational changes that may accompany receptor binding.


Journal of Protein Chemistry | 1997

Changes in Conformation and Stability upon Formation of Complexes of Erythropoietin (EPO) and Soluble EPO Receptor

Linda O. Narhi; Kenneth H. Aoki; John S. Philo; Tsutomu Arakawa

Erythropoietin (EPO) is a glycoprotein hormone which belongs to the four-helical-bundle cytokine family and regulates the level of circulating red blood cells. The EPO receptor (EPOR) belongs to the cytokine-receptor family of proteins. While many of the downstream events following receptor/ligand interaction have been defined, both ligand-induced receptor dimerization and conformational changes induced by binding have been implicated as the initial step in signal transduction. In a recent paper [Philo et al. (1996), Biochemistry38, 1681–1691] we described the formation of both 1:1 and 2:1 EPOR/EPO complexes. In this paper, we examine changes in protein conformation and stability resulting from the formation of both 1:1 and 2:1 complexes of the soluble extracellular domain of EPOR and the recombinant EPO derived from either Chinese hamster ovary cells or from Escherichia coli cells. Occupation of the first binding site results in a slight conformational change that is apparent in both the far- and near-UV circular dichroism spectra. Formation of the 2:1 complex results in an even greater change in conformation which involves the local environment of one or more aromatic amino acids, accompanied perhaps by a small increase in helical content of the complex. This change in local conformation could occur in the EPO molecule, in the EPOR, in both EPOR molecules due to dimerization, or in all molecules in the trimer. The 1:1 complex exhibits increased stability to thermal-induced denaturation relative to the individual protein component; indeed, the E. coli-derived (nonglycosylated) EPO stays folded in the complex at temperatures where the EPO alone would have unfolded and precipitated. Glycosylation of the receptor increases the reversibility of thermal denaturation, but does not affect the temperature at which this unfolding reaction occurs.


Photochemistry and Photobiology | 2008

Differentiation of the Local Structure Around Tryptophan 51 and 64 in Recombinant Human Erythropoietin by Tryptophan Phosphorescence

Bruce A. Kerwin; Kenneth H. Aoki; Margherita Gonelli; Giovanni B. Strambini

Recombinant human erythropoietin is a 4‐helix bundle, glycosylated cytokine containing three tryptophan residues at positions 51, 64 and 88 whose phosphorescence emission may represent a sensitive probe of the structure at multiple sites near or at the protein surface. This report characterizes the phosphorescence properties (spectral energy, thermal spectral relaxation and phosphorescence lifetime), from low temperature glasses to ambient temperature, of the native protein plus that of three single point mutation analogs where each Trp was replaced by Phe. The structural information inferred from the phosphorescence parameters was essentially in good agreement with the structure of the Escherichia coli‐produced nonglycosylated protein determined by nuclear magnetic resonance (Cheetham et al., Nat Struct Biol [1998] 5:861). The results showed that the fluorescence and phosphorescence spectra of the native protein were entirely due to independent contributions of Trp51 and Trp64 and that Trp88 was quenched under all conditions. The phosphorescence emissions of Trp51 and Trp64 were differentiated by their unique spectra at 77 K with Trp64 exhibiting an unusually blueshifted spectrum likely due to the attractive interaction of Arg110 and Lys116 with the ground state dipole of Trp64. In the native protein the room temperature phosphorescence lifetime of Trp64 was relatively short with a time of 1.62 ms whereas the lifetime of Trp51 was five‐fold longer. Characterization of the single point mutation analogs showed that each lifetime was composed of multiple components revealing the presence of multiple stable conformations of the protein at these surface sites.


Biochemistry | 1996

Dimerization of the Extracellular Domain of the Erythropoietin (EPO) Receptor by EPO: One High-Affinity and One Low-Affinity Interaction

John S. Philo; Kenneth H. Aoki; Tsutomu Arakawa; Linda O. Narhi; Jie Wen


Journal of Pharmaceutical Sciences | 2006

Biophysical Comparability of the Same Protein From Different Manufacturers: A Case Study Using Epoetin Alfa From Epogen® and Eprex®

Songpon Deechongkit; Kenneth H. Aoki; Sungae S. Park; Bruce A. Kerwin


Protein Engineering | 2001

Asn to Lys mutations at three sites which are N-glycosylated in the mammalian protein decrease the aggregation of Escherichia coli-derived erythropoietin

Linda O. Narhi; Tsutomu Arakawa; Kenneth H. Aoki; Jie Wen; Steve Elliott; Thomas C. Boone; Janet Cheetham


Journal of Biochemistry | 2000

Stabilization of Human Recombinant Erythropoietin through Interactions with the Highly Branched N-Glycans

Teruko Toyoda; Tomokazu Itai; Tsutomu Arakawa; Kenneth H. Aoki; Haruki Yamaguchi


Protein Engineering | 1999

Engineering a soluble extracellular erythropoietin receptor (EPObp) in Pichia pastoris to eliminate microheterogeneity, and its complex with erythropoietin

Hangjun Zhan; Beishan Liu; Scott W. Reid; Kenneth H. Aoki; Cuiwei Li; Rashid Syed; Cyrus Karkaria; Gary Koe; Karen C. Sitney; Kirk Hayenga; Firoz Mistry; Laura Savel; Mark Dreyer; Bradley A. Katz; Jolanda Schreurs; David J. Matthews; Janet Cheetham; Joan C. Egrie; Lutz B. Giebel; Robert M. Stroud


Bioscience, Biotechnology, and Biochemistry | 2001

Copper Staining Method for Extracting Biologically Active Proteins from Native Gels

Jie Wen; Mei Zhang; Thomas P. Horan; John S. Philo; Tiansheng Li; Elizabeth A. Mendiaz; Keith E. Langley; Kenneth H. Aoki; Moeka Kuwamoto; Yoshiko Kita; Tsutomu Arakawa

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