Khurshid Ayub

Synthesis, Crystal Structures and Spectroscopic Properties of Triazine-Based Hydrazone Derivatives; A Comparative Experimental-Theoretical Study

We report here a comparative theoretical and experimental study of four triazine-based hydrazone derivatives. The hydrazones are synthesized by a three step process from commercially available benzil and thiosemicarbazide. The structures of all compounds were determined by using the UV-Vis., FT-IR, NMR (1H and 13C) spectroscopic techniques and finally confirmed unequivocally by single crystal X-ray diffraction analysis. Experimental geometric parameters and spectroscopic properties of the triazine based hydrazones are compared with those obtained from density functional theory (DFT) studies. The model developed here comprises of geometry optimization at B3LYP/6-31G (d, p) level of DFT. Optimized geometric parameters of all four compounds showed excellent correlations with the results obtained from X-ray diffraction studies. The vibrational spectra show nice correlations with the experimental IR spectra. Moreover, the simulated absorption spectra also agree well with experimental results (within 10–20 nm). The molecular electrostatic potential (MEP) mapped over the entire stabilized geometries of the compounds indicated their chemical reactivates. Furthermore, frontier molecular orbital (electronic properties) and first hyperpolarizability (nonlinear optical response) were also computed at the B3LYP/6-31G (d, p) level of theory.

Synthesis, crystal structure, spectroscopic and density functional theory (DFT) study of N-[3-anthracen-9-yl-1-(4-bromo-phenyl)-allylidene]-N-benzenesulfonohydrazine

N-[3-anthracen-9-yl-1-(4-bromo-phenyl)-allylidene]-N-benzenesulfonohydrazine has been synthesized and characterized by various spectroscopic techniques including FT-IR, UV-vis, (1)H-NMR, (13)C-NMR spectroscopy, and the structure was unequivocally confirmed by single crystal X-ray diffraction studies. The compound crystallized in monoclinic system with P21/n space group, and adopted cis-geometry around the azomethine CN double bond. The X-ray crystal structure revealed that the intermolecular packing was stabilized by C-H⋯O type hydrogen bonding interaction, whereas NH was not involved in hydrogen bonding due to steric hindrance. Absorption wavelength was studied by scanning UV-vis. absorption spectrum in different solvents to explore excited state stability of the molecule in polar solvent. Density functional theory calculations were performed at B3LYP/6-31G (d, p) level in order to compare the experimental results with the theoretical results. The simulated molecular electrostatic potential (MEP), Mulliken charges and NPA (natural population analysis) also confirmed the presence of specific intermolecular hydrogen bonding (C-H⋯O). In addition natural bond orbital (NBO) analysis (intra and inter molecular bonding and interaction among bonds), frontier molecular orbital analysis (electronic properties) and first hyperpolarizability analysis (nonlinear optical response) were simulated at B3LYP/6-31G (d, p) level of theory.

Density functional theory and phytochemical study of Pistagremic acid.

We report here for the first time a comparative theoretical and experimental study of Pistagremic acid (P.A). We have developed a theoretical model for obtaining the electronic and spectroscopic properties of P.A. The simulated data showed nice correlation with the experimental data. The geometric and electronic properties were simulated at B3LYP/6-31 G (d, p) level of density functional theory (DFT). The optimized geometric parameters of P.A were found consistent with those from X-ray crystal structure. Differences of about 0.01 and 0.15 Å in bond length and 0.19-1.30° degree in the angles, respectively; were observed between the experimental and theoretical data. The theoretical vibrational bands of P.A were found to correlate with the experimental IR spectrum after a common scaling factor of 0.963. The experimental and predicted UV-Vis spectra (at B3LYP/6-31+G (d, p)) have 36 nm differences. This difference from experimental results is because of the condensed phase nature of P.A. Electronic properties such as Ionization Potential (I.P), Electron Affinities (E.A), co-efficient of highest occupied molecular orbital (HOMO), co-efficient of lowest unoccupied molecular orbital (LUMO) of P.A were estimated for the first time however, no correlation can be made with experiment. Inter-molecular interaction and its effect on vibrational (IR), electronic and geometric parameters were simulated by using Formic acid as model for hydrogen bonding in P.A.

Phytochemical, spectroscopic and density functional theory study of Diospyrin, and non-bonding interactions of Diospyrin with atmospheric gases.

Density functional theory (DFT) and phytochemical study of a natural product, Diospyrin (DO) have been carried out. A suitable level of theory was developed, based on correlating the experimental and theoretical data. Hybrid DFT method at B3LYP/6-31G (d,p) level of theory is employed for obtaining the electronic, spectroscopic, inter-molecular interaction and thermodynamic properties of DO. The exact structure of DO is confirmed from the nice validation of the theory and experiment. Non-covalent interactions of DO with different atmospheric gases such as NH3, CO2, CO, and H2O were studied to find out its electroactive nature. The experimental and predicted geometrical parameters, IR and UV-vis spectra (B3LYP/6-31+G (d,p) level of theory) show excellent correlation. Inter-molecular non-bonding interaction of DO with atmospheric gases is investigated through geometrical parameters, electronic properties, charge analysis, and thermodynamic parameters. Electronic properties include, ionization potential (I.P.), electron affinities (E.A.), electrostatic potential (ESP), density of states (DOS), HOMO, LUMO, and band gap. All these characterizations have corroborated each other and confirmed the presence of non-covalent nature in DO with the mentioned gases.

Isolation, spectroscopic and density functional theory studies of 7-(4-methoxyphenyl)-9H-furo[2,3-f]chromen-9-one: a new flavonoid from the bark of Millettia ovalifolia.

The phytochemical examination of chloroform soluble fraction (FX2) of methanolic extract of bark of Millettia ovalifolia yielded a new flavonoid; 7-(4-methoxyphenyl)-9H-furo [2,3-f]chromen-9-one (1). Compound 1 is characterized by spectroscopic analytical techniques such as UV, IR, 1D, 2D NMR spectroscopy, and mass spectrometry. A theoretical model is also developed for obtaining geometric, electronic and spectroscopic properties of 1. The geometry optimization and harmonic vibration simulations have been carried out at B3LYP/6-31G(d,p). The vibrational spectrum of compound 1 shows nice correlation with the experimental IR spectrum, through a scaling factor of 0.9613. (1)H and (13)C NMR chemical shifts are simulated using Cramers re-parameterized function WP04 at 6-31G(d,p) basis set, and correlate nicely with the experimental chemical shifts.

Design of liquid crystals with ‘de Vries-like’ properties: carbosilane-terminated 5-phenylpyrimidine mesogens suitable for chevron-free FLC formulations

Smectic liquid crystals with ‘de Vries-like’ properties are characterized by a maximum layer contraction of ≤1% upon transition from the orthogonal SmA phase to the tilted SmC phase. In an effort to expand the library of ‘de Vries-like’ liquid crystals required for the formulation of chevron-free ferroelectric liquid crystal mixtures, we report the synthesis of a homologous series of tricarbosilane 5-phenylpyrimidine liquid crystals QL16-n using an improved synthetic route, and the characterization of their liquid crystalline and ‘de Vries-like’ properties. Measurements of orientational order parameters S2 and effective molecular lengths Leff by monodomain 2D X-ray scattering suggest that ‘de Vries-like’ behavior in series QL16-n is due to the combined effect of an increase in S2 and a decrease in bilayer interdigitation, thus causing a smectic layer expansion that compensates for the molecular tilt in the SmC phase. We also show how the optical tilt angle in the SmC phase may be optimized for SSFLC displays—without compromising ‘de Vries-like’ properties—by shortening the tricarbosilane end-group to a dicarbosilane. Two of the new materials reported herein, 5-[4-(12,12,14,14,16,16-hexamethyl-12,14,16-trisilaheptadecyloxy)phenyl]-2-hexyloxypyrimidine (QL16-6) and 2-hexyloxy-5-[4-(12,12,14,14-tetramethyl-12,14-disilapentadecyloxy)phenyl]pyrimidine (QL24-6) rank among the best ‘de Vries-like’ materials reported heretofore, with broad SmC phases and reduction factors R of 0.17 and 0.18, respectively, at a reduced temperature T − TAC = −10 K. We also show that inverting the orientation of the 5-phenylpyrimidine core in the homologous series QL17-n causes a suppression of ‘de Vries-like’ properties. These results suggest that non-covalent core–core interactions in the intercalated smectic bilayers formed by these mesogens may influence ‘de Vries-like’ behavior.

Theoretical study of the non linear optical properties of alkali metal (Li, Na, K) doped aluminum nitride nanocages

The effect of alkali metal (Li, Na, and K) doping in aluminum nitride (Al12N12) nanocages is studied through density functional theory (DFT) methods. Six new stable compounds of M@Al12N11 and M@Al11N12 are designed theoretically where alkali metal replaces an atom (Al/N) of a nanocage. The stability of the doped nano-cages is evaluated through binding energy calculations. Doping alkali atom M (M = Li, Na, K) into a nanocage significantly reduces the band gap (HOMO–LUMO gap). Polarizability and first hyperpolarizability are calculated using long range separated methods to evaluate the non-linear optical (NLO) properties of these doped systems. The hyperpolarizability of MAl12N11 nanocages is much higher than that of M@Al11N12 nanocages. The higher hyperpolarizability of M@Al12N11 nanocages is believed to arise from participation of excess diffuse electrons, revealed from PDOS.

Are phosphide nano-cages better than nitride nano-cages? A kinetic, thermodynamic and non-linear optical properties study of alkali metal encapsulated X12Y12 nano-cages

Density functional theory calculations have been performed for alkali metal encapsulated X12Y12 nano-cages (X = B, Al and Y = N, P) to evaluate their stability, boundary crossing barriers and optical (linear and non-linear) properties. The adsorption energies of alkali metals in nano-cages are calculated, and correlated with the size of the nano-cages and alkali atoms. Distortion (expansion) of the nano-cages caused by alkali metal encapsulation was estimated through distortion energy. The distortion energies show good correlation with the diameter of the nano-cages. Kinetic barriers for the movement of alkali metals through nano-cages (boundary crossing barriers) are quantitatively measured. This manuscript presents the first ever study on boundary crossing barriers for alkali metal atoms through any spherical surface. The translation of alkali metals through the boundary of nano-cages presents a new approach for encapsulation of alkali metal atoms ((particularly lithium)) in nano-cages. The linear and non-linear optical properties of alkali metal encapsulated nano-cages are calculated. A quite remarkable non-linear optical response is calculated for lithium and potassium encapsulated boron phosphide (B12P12 or BP) nano-cages. In general, the non-linear optical response of phosphide nano-cages is two to three orders of magnitude higher than those of the corresponding nitride nano-cages. The calculated first hyperpolarizability of the K@BP nano-cage is 5.7 × 105 a.u., a value comparable to that of the best NLO material reported in the literature. The electronic structures of nano-cages including the HOMO–LUMO gap, TDOS, PDOS and excitation energies are analyzed to rationalize the extraordinary NLO response of the phosphide nano-cages. The NLO response of the K@BP nano-cage is primarily attributed to a very low excitation energy (0.5 eV). Interaction of nitrogen and phosphorus (of the nano-cages) with alkali metals differs between aluminum and boron nano-cages. Interaction of lone pair containing atoms with alkali metals in aluminum nano-cages generates diffuse excess electrons, whereas no such diffuse excess electrons are generated in boron nano-cages. UV-Vis and infra-red spectral characteristics for these encapsulated nano-cages are presented as a reference for future studies.

Pyrrole versus quinoline formation in the palladium catalyzed reaction of 2-alkynyl-3-bromothiophenes and 2-alkynyl-3-bromofurans with anilines. A combined experimental and computational study

Benzofuroquinolines were prepared by a new type of Pd catalyzed annulation reaction. In the first step, 2-alkynyl-3-bromobenzofurans were prepared by Sonogashira reactions of 2,3-dibromobenzofuran. Their Pd catalyzed reaction with electron-rich anilines afforded benzofuroquinolines by a domino C-N coupling/annulation process. This reaction proceeds as a C,N-cyclization via the nitrogen atom and the ortho-carbon of the aniline. Similarly, furoquinolines were prepared from 2,3-dibromofuran. In contrast, benzofuropyrroles and furopyrroles were formed by N,N-cyclization when electron-poor anilines were used. Earlier, we reported results related to the thiophene and benzothiophene series. Quinolines were formed from 2,3-dibromobenzothiophene when electron rich anilines were used. In contrast, pyrroles were obtained in the case of electron-poor anilines. On the other hand, pyrroles were generally obtained, not depending on the type of aniline, when 2,3-dibromothiophene was employed as the starting material. In the present article, a detailed DFT study related to the mechanism (quinoline versus pyrrole formation) is reported which provides a rationalization of the selectivities observed for the furan, benzofuran, thiophene and benzothiophene series and for the different selectivities observed for electron-rich and -poor anilines.

DFT study of boron trichloride adsorption on the surface of Al12N12 nanocluster

ABSTRACT In the present study, ability of Al12N12 nanocluster as a new adsorbent for boron trichloride is studied by using density functional theory (DFT) calculations. Two distinct relaxed geometries of Al12N12-BCl3 complex are located. The dominant configuration (B) involves chemisorption of BCl3 on aluminum nitride nanocluster with an adsorption energy of −303 kJ/mol compared to −33 kJ/mol for a less favourable configuration A (based on wB97XD functional). The enthalpy and Gibbs free energy of interaction for each relaxed was also analysed for better understanding of the thermochemistry of adsorption process. The charge transfer analysis reveals opposing trend in both configurations. Configuration A showed transfer of charge from BCl3 to nanocluster (+0.123 e), whereas reverse direction of charge transfer was found for the other configuration (−0.083 e). Furthermore, the frontier molecular orbital as well as densities of states of all systems are analysed to follow the changes in the electronic structure of Al12N12 upon adsorption of BCl3.