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Dive into the research topics where Kiran K. Seunarine is active.

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Featured researches published by Kiran K. Seunarine.


Diffusion MRI#R##N#From Quantitative Measurement to <i>In vivo</i> Neuroanatomy | 2009

Multiple Fibers: Beyond the Diffusion Tensor

Kiran K. Seunarine; Daniel C. Alexander

Publisher Summary This chapter describes the techniques for resolving multiple fiber populations in each voxel, as well as methods to exploit the information they recover. It begins by describing the limitations of DTI and the problems that, complex white-matter configurations such as crossing fiber-populations and bending fibers present. The technique has become popular because it provides two unique insights into tissue microstructure: it quantifies diffusion anisotropy, which is a useful index of white matter integrity, and provides an estimate of the principal direction of axon fibers, which enables tractography. Powerful though it is, DTI has several limitations. One key limitation is that it can only recover a single fiber orientation in each voxel and fails at fiber crossings. This limitation is a major obstacle for tractography and connectivity mapping. The multi-tensor model is a simple generalization of DTI, which replaces the Gaussian model for p with a mixture of n Gaussian densities. The model assumes the voxel contains n distinct groups or “populations” of fibers and that diffusing molecules stay within only one population. It describes multiple-tensor models, diffusion spectrum imaging, QBall, spherical deconvolution, and persistent angular structure (PAS) MRI, along with the pros and cons of each method. One class of algorithms, including QBall, DOT, and PASMRI, estimates features of the particle displacement density, p, that are spherical functions with peaks that provide fiber-orientation estimates. The aim is usually to recover the distribution of fiber orientations or fODF. However, the relationship between p and the fODF is complex and unclear. Spherical deconvolution methods estimate the fODF more directly, but rely on overly simple modeling assumptions.


Brain | 2012

Effect of growth hormone deficiency on brain structure, motor function and cognition

Emma A Webb; Michelle A. O'Reilly; Jonathan D. Clayden; Kiran K. Seunarine; Wui K. Chong; Naomi Dale; Alison Salt; Chris A. Clark; Mehul T. Dattani

The growth hormone-insulin-like growth factor-1 axis plays a role in normal brain growth but little is known of the effect of growth hormone deficiency on brain structure. Children with isolated growth hormone deficiency (peak growth hormone <6.7 µg/l) and idiopathic short stature (peak growth hormone >10 µg/l) underwent cognitive assessment, diffusion tensor imaging and volumetric magnetic resonance imaging prior to commencing growth hormone treatment. Total brain, corpus callosal, hippocampal, thalamic and basal ganglia volumes were determined using Freesurfer. Fractional anisotropy (a marker of white matter structural integrity) images were aligned and tract-based spatial statistics performed. Fifteen children (mean 8.8 years of age) with isolated growth hormone deficiency [peak growth hormone <6.7 µg/l (mean 3.5 µg/l)] and 14 controls (mean 8.4 years of age) with idiopathic short stature [peak growth hormone >10 µg/l (mean 15 µg/l) and normal growth rate] were recruited. Compared with controls, children with isolated growth hormone deficiency had lower Full-Scale IQ (P < 0.01), Verbal Comprehension Index (P < 0.01), Processing Speed Index (P < 0.05) and Movement-Assessment Battery for Children (P < 0.008) scores. Verbal Comprehension Index scores correlated significantly with insulin-like growth factor-1 (P < 0.03) and insulin-like growth factor binding protein-3 (P < 0.02) standard deviation scores in isolated growth hormone deficiency. The splenium of the corpus callosum, left globus pallidum, thalamus and hippocampus (P < 0.01) were significantly smaller; and corticospinal tract (bilaterally; P < 0.045, P < 0.05) and corpus callosum (P < 0.05) fractional anisotropy were significantly lower in the isolated growth hormone deficiency group. Basal ganglia volumes and bilateral corticospinal tract fractional anisotropy correlated significantly with Movement-Assessment Battery for Children scores, and corpus callosum fractional anisotropy with Full-Scale IQ and Processing Speed Index. In patients with isolated growth hormone deficiency, white matter abnormalities in the corpus callosum and corticospinal tract, and reduced thalamic and globus pallidum volumes relate to deficits in cognitive function and motor performance. Follow-up studies that investigate the course of the structural and cognitive deficits on growth hormone treatment are now required to confirm that growth hormone deficiency impacts significantly on brain structure, cognitive function and motor performance.


Brain | 2015

Selective vulnerability of Rich Club brain regions is an organizational principle of structural connectivity loss in Huntington's disease

Peter McColgan; Kiran K. Seunarine; Adeel Razi; James H. Cole; Sarah Gregory; Alexandra Durr; Raymund A.C. Roos; Julie C. Stout; Bernhard Landwehrmeyer; Rachael I. Scahill; Chris A. Clark; Geraint Rees; Sarah J. Tabrizi

Diffuse structural connectivity loss occurs early in Huntington’s disease. However, the organizational principles underlying these changes are unclear. Using whole brain diffusion tractography and graph theoretical analysis, McColgan, Seunarine et al. identify a specific role for highly connected rich club regions as a substrate for structural connectivity loss in Huntington’s disease.


NeuroImage: Clinical | 2013

White matter microstructure correlates with autism trait severity in a combined clinical-control sample of high-functioning adults

Clare R. Gibbard; Juejing Ren; Kiran K. Seunarine; Jonathan D. Clayden; David Skuse; Chris A. Clark

Diffusion tensor imaging (DTI) studies have demonstrated white matter (WM) abnormalities in tracts involved in emotion processing in autism spectrum disorder (ASD), but little is known regarding the nature and distribution of WM anomalies in relation to ASD trait severity in adults. Increasing evidence suggests that ASD occurs at the extreme of a distribution of social abilities. We aimed to examine WM microstructure as a potential marker for ASD symptom severity in a combined clinical–neurotypical population. SIENAX was used to estimate whole brain volume. Tract-based spatial statistics (TBSS) was used to provide a voxel-wise comparison of WM microstructure in 50 high-functioning young adults: 25 ASD and 25 neurotypical. The severity of ASD traits was measured by autism quotient (AQ); we examined regressions between DTI markers of WM microstructure and ASD trait severity. Cognitive abilities, measured by intelligence quotient, were well-matched between the groups and were controlled in all analyses. There were no significant group differences in whole brain volume. TBSS showed widespread regions of significantly reduced fractional anisotropy (FA) and increased mean diffusivity (MD) and radial diffusivity (RD) in ASD compared with controls. Linear regression analyses in the combined sample showed that average whole WM skeleton FA was negatively influenced by AQ (p = 0.004), whilst MD and RD were positively related to AQ (p = 0.002; p = 0.001). Regression slopes were similar within both groups and strongest for AQ social, communication and attention switching scores. In conclusion, similar regression characteristics were found between WM microstructure and ASD trait severity in a combined sample of ASD and neurotypical adults. WM anomalies were relatively more severe in the clinically diagnosed sample. Both findings suggest that there is a dimensional relationship between WM microstructure and severity of ASD traits from neurotypical subjects through to clinical ASD, with reduced coherence of WM associated with greater ASD symptoms. General cognitive abilities were independent of the relationship between WM indices and ASD traits.


Human Brain Mapping | 2015

Basal Ganglia-Cortical Structural Connectivity in Huntington's Disease

M Novak; Kiran K. Seunarine; Clare R. Gibbard; Peter McColgan; Bogdan Draganski; K. J. Friston; Chris A. Clark; Sarah J. Tabrizi

Huntingtons disease is an incurable neurodegenerative disease caused by inheritance of an expanded cytosine‐adenine‐guanine (CAG) trinucleotide repeat within the Huntingtin gene. Extensive volume loss and altered diffusion metrics in the basal ganglia, cortex and white matter are seen when patients with Huntingtons disease (HD) undergo structural imaging, suggesting that changes in basal ganglia‐cortical structural connectivity occur. The aims of this study were to characterise altered patterns of basal ganglia‐cortical structural connectivity with high anatomical precision in premanifest and early manifest HD, and to identify associations between structural connectivity and genetic or clinical markers of HD. 3‐Tesla diffusion tensor magnetic resonance images were acquired from 14 early manifest HD subjects, 17 premanifest HD subjects and 18 controls. Voxel‐based analyses of probabilistic tractography were used to quantify basal ganglia‐cortical structural connections. Canonical variate analysis was used to demonstrate disease‐associated patterns of altered connectivity and to test for associations between connectivity and genetic and clinical markers of HD; this is the first study in which such analyses have been used. Widespread changes were seen in basal ganglia‐cortical structural connectivity in early manifest HD subjects; this has relevance for development of therapies targeting the striatum. Premanifest HD subjects had a pattern of connectivity more similar to that of controls, suggesting progressive change in connections over time. Associations between structural connectivity patterns and motor and cognitive markers of disease severity were present in early manifest subjects. Our data suggest the clinical phenotype in manifest HD may be at least partly a result of altered connectivity. Hum Brain Mapp 36:1728–1740, 2015.


Journal of Inherited Metabolic Disease | 2011

Brain white matter abnormalities in paediatric Gaucher Type I and Type III using diffusion tensor imaging

Elin Haf Davies; Kiran K. Seunarine; Tina Banks; Chris A. Clark; Ashok Vellodi

ObjectiveBiomarkers to monitor neurological dysfunction in Neuronopathic Gaucher disease (NGD) are lacking. Diffusion tensor imaging (DTI) is a technique which allows us to probe the microstructure of the white-matter of the brain, in-vivo. The aim of this study was to investigate the value of DTI to visualise and quantify white matter integrity in children with NGD and Type I Gaucher.DesignDTI was performed and fractional anisotropy (FA), mean diffusivity (MD), axial (λaxial) diffusivity and radial (λradial) diffusivity maps calculated. Tract-based spatial statistics (TBSS) was used to perform a voxel-wise statistical analysis of the main white matter structures compared to age-sex matched control groups.SettingThe study was performed at Great Ormond Street Children’s Hospital NHS TrustPatientsFour NGD and three Type I Gaucher paediatric patients were recruitedResultsThe findings suggest the presence of microstructural white matter changes in NGD patients primarily in the middle cerebellar peduncles compared to an age-sex matched control group. This finding is relevant to the clinical manifestation of ataxia seen in NGD. Diffuse non-specific changes were seen in the Type I patients, but without a focal point.ConclusionsThis study is the first to use DTI to examine the Gaucher brain. While the numbers studied are small, the results suggest that DTI may be an attractive surrogate marker of NGD, worthy of further exploration for use in clinical studies.


Journal of Huntington's disease | 2015

Neuropsychiatry and White Matter Microstructure in Huntington’s Disease

Sarah Gregory; Rachael I. Scahill; Kiran K. Seunarine; Cheryl L. Stopford; Hui Zhang; Jiaying Zhang; Michael Orth; Alexandra Durr; Raymund A.C. Roos; Douglas R. Langbehn; Jeffrey D. Long; Hans J. Johnson; Geraint Rees; Sarah J. Tabrizi; David Craufurd

Abstract Background: Neuropsychiatric symptoms in Huntington’s disease (HD) are often evident prior to clinical diagnosis. Apathy is highly correlated with disease progression, while depression and irritability occur at different stages of the disease, both before and after clinical onset. Little is understood about the neural bases of these neuropsychiatric symptoms and to what extent those neural bases are analogous to neuropsychiatric disorders in the general population. Objective: We used Diffusion Tensor Imaging (DTI) to investigate structural connectivity between brain regions and any putative microstructural changes associated with depression, apathy and irritability in HD. Methods: DTI data were collected from 39 premanifest and 45 early-HD participants in the Track-HD study and analysed using whole-brain Tract-Based Spatial Statistics. We used regression analyses to identify white matter tracts whose structural integrity (as measured by fractional anisotropy, FA) was correlated with HADS-depression, PBA-apathy or PBA-irritability scores in gene-carriers and related to cumulative probability to onset (CPO). Results: For those with the highest CPO, we found significant correlations between depression scores and reduced FA in the splenium of the corpus callosum. In contrast, those with lowest CPO demonstrated significant correlations between irritability scores and widespread FA reductions. There was no significant relationship between apathy and FA throughout the whole brain. Conclusions: We demonstrate that white matter changes associated with both depression and irritability in HD occur at different stages of disease progression concomitant with their clinical presentation.


Brain | 2016

Sexual Dimorphism in White Matter Developmental Trajectories Using Tract-Based Spatial Statistics

Kiran K. Seunarine; Jonathan D. Clayden; Sebastian Jentschke; M. Muñoz; Janine M. Cooper; Martin J. Chadwick; Tina Banks; Faraneh Vargha-Khadem; Chris A. Clark

Abstract Increasing evidence is emerging for sexual dimorphism in the trajectory of white matter development in children assessed using volumetric magnetic resonance imaging (MRI) and more recently diffusion MRI. Recent studies using diffusion MRI have examined cohorts with a wide age range (typically between 5 and 30 years) showing focal regions of differential diffusivity and fractional anisotropy (FA) and have implicated puberty as a possible contributory factor. To further investigate possible dimorphic trajectories in a young cohort, presumably closer to the expected onset of puberty, we used tract-based spatial statistics to investigate diffusion metrics. The cohort consisted of 23 males and 30 females between the ages of 8 and 16 years. Differences in diffusion metrics were corrected for age, total brain volume, and full scale IQ. In contrast to previous studies showing focal differences between males and females, widespread sexually dimorphic trajectories in structural white matter development were observed. These differences were characterized by more advanced development in females compared to males indicated by lower mean diffusivity, radial and axial diffusivity, and higher FA in females. This difference appeared to be larger at lower ages (8–9 years) with diffusion measures from males and females tending to converge between 10 and 14 years of age. Males showed a steeper slope for age-diffusion metric correlations compared to females, who either did not correlate with age or correlated in fewer regions. Further studies are now warranted to determine the role of hormones on the observed differences, particularly in 8–9-year-old children.


NeuroImage: Clinical | 2013

Prolonged febrile seizures cause reversible reductions in white matter integrity

Michael Yoong; Kiran K. Seunarine; Marina M. Martinos; Richard Chin; Chris A. Clark; Rodney C. Scott

Prolonged febrile seizures (PFS) are the commonest cause of childhood status epilepticus and are believed to carry a risk of neuronal damage, in particular to the mesial temporal lobe. This study was designed to determine: i) the effect of prolonged febrile seizures on white matter and ii) the temporal evolution of any changes seen. 33 children were recruited 1 month following PFS and underwent diffusion tensor imaging (DTI) with repeat imaging at 6 and 12 months after the original episode of PFS. 18 age-matched healthy control subjects underwent similar investigations at a single time point. Tract-based spatial statistics (TBSS) was used to compare fractional anisotropy (FA), mean diffusivity (MD), axial diffusivity (AD) and radial diffusivity (RD) between patients and controls on a voxel-wise basis within the white matter skeleton. Widespread reductions in FA along multiple white matter tracts were found at 1 and 6 months post-PFS, but these had resolved at 12 months. At one month post-PFS the main changes seen were reductions in AD but at 6 months these had predominantly changed to increases in RD. These widespread white matter changes have not previously been noted following PFS. There are many possible explanations, but one plausible hypothesis is that this represents a temporary halting of normal white matter development caused by the seizure, that then resumes and normalises in the majority of children.


Human Brain Mapping | 2016

Natural variation in sensory-motor white matter organization influences manifestations of Huntington's disease

Michael Orth; Sarah Gregory; Rachael I. Scahill; Isabella Sm Mayer; Lora Minkova; Stefan Klöppel; Kiran K. Seunarine; Lara A. Boyd; Beth Borowsky; Ralf Reilmann; G. Bernhard Landwehrmeyer; Blair R. Leavitt; Raymund A.C. Roos; Alexandra Durr; Geraint Rees; John C. Rothwell; Douglas R. Langbehn; Sarah J. Tabrizi; TRACK-On Investigators

While the HTT CAG‐repeat expansion mutation causing Huntingtons disease (HD) is highly correlated with the rate of pathogenesis leading to disease onset, considerable variance in age‐at‐onset remains unexplained. Therefore, other factors must influence the pathogenic process. We asked whether these factors were related to natural biological variation in the sensory‐motor system. In 243 participants (96 premanifest and 35 manifest HD; 112 controls), sensory‐motor structural MRI, tractography, resting‐state fMRI, electrophysiology (including SEP amplitudes), motor score ratings, and grip force as sensory‐motor performance were measured. Following individual modality analyses, we used principal component analysis (PCA) to identify patterns associated with sensory‐motor performance, and manifest versus premanifest HD discrimination. We did not detect longitudinal differences over 12 months. PCA showed a pattern of loss of caudate, grey and white matter volume, cortical thickness in premotor and sensory cortex, and disturbed diffusivity in sensory‐motor white matter tracts that was connected to CAG repeat length. Two further major principal components appeared in controls and HD individuals indicating that they represent natural biological variation unconnected to the HD mutation. One of these components did not influence HD while the other non‐CAG‐driven component of axial versus radial diffusivity contrast in white matter tracts were associated with sensory‐motor performance and manifest HD. The first component reflects the expected CAG expansion effects on HD pathogenesis. One non‐CAG‐driven component reveals an independent influence on pathogenesis of biological variation in white matter tracts and merits further investigation to delineate the underlying mechanism and the potential it offers for disease modification. Hum Brain Mapp 37:4615–4628, 2016.

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Chris A. Clark

University College London

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Sarah J. Tabrizi

UCL Institute of Neurology

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Geraint Rees

University College London

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Sarah Gregory

Wellcome Trust Centre for Neuroimaging

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Peter McColgan

UCL Institute of Neurology

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Adeel Razi

Wellcome Trust Centre for Neuroimaging

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