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Dive into the research topics where Koichiro Kato is active.

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Featured researches published by Koichiro Kato.


Journal of Chemical Physics | 2018

Nuclear quantum effects of light and heavy water studied by all-electron first principles path integral simulations

Masahiko Machida; Koichiro Kato; Motoyuki Shiga

The isotopologs of liquid water, H2O, D2O, and T2O, are studied systematically by first principles PIMD simulations, in which the whole entity of the electrons and nuclei are treated quantum mechanically. The simulation results are in reasonable agreement with available experimental data on isotope effects, in particular, on the peak shift in the radial distributions of H2O and D2O and the shift in the evaporation energies. It is found that, due to differences in nuclear quantum effects, the H atoms in the OH bonds more easily access the dissociative region up to the hydrogen bond center than the D (T) atoms in the OD (OT) bonds. The accuracy and limitation in the use of the current density-functional-theory-based first principles PIMD simulations are also discussed. It is argued that the inclusion of the dispersion correction or relevant improvements in the density functionals are required for the quantitative estimation of isotope effects.


Journal of Computer Chemistry, Japan | 2015

Implementation of Pair Interaction Energy DecompositionAnalysis and Its Applications to Protein-Ligand Systems

Takayuki Tsukamoto; Koichiro Kato; Akifumi Kato; Tatsuya Nakano; Yuji Mochizuki; Kaori Fukuzawa


Chemical Physics Letters | 2015

Modeling of hydroxyapatite–peptide interaction based on fragment molecular orbital method

Koichiro Kato; Kaori Fukuzawa; Yuji Mochizuki


international conference on informatics electronics and vision | 2017

Modeling of nano-bio interfaces based on atomic scale simulations

Koichiro Kato


The Japan Society of Applied Physics | 2017

Nuclear Quantum Effects on Water: Comparison of the structure of light and heavy water by first principles path integral simulations

Koichiro Kato; Masahiko Machida; Motoyuki Shiga


The Japan Society of Applied Physics | 2016

Behavior Analysis of single amino acid on Hydroxyapatite surface by Computational Simulation

Koichiro Kato; Aya Hashimoto; Kaori Fukuzawa; Eiichi Tamiya


The Japan Society of Applied Physics | 2016

Analytical study of hydroxyapatite in osteoblast tissue by Raman spectroscopy and computational simulation

Aya Hashimoto; Chiaki Morimoto; Masahide Takedachi; Yoshinori Yamaguchi; Koichiro Kato; Kaori Fukuzawa; Shinya Murakami; Eiichi Tamiya


The Japan Society of Applied Physics | 2016

Interaction Analysis between Polymer and Silica nano-particle by Fragment Molecular Orbital Method

Koichiro Kato; Yutaro Ishikawa; Koji Okuwaki; Shutaro Kawata; Yuji Mochizuki; Taku Ozawa


The Japan Society of Applied Physics | 2015

[Young Scientist Presentation Award Speech] Interaction Analysis between Hydroxyapatite and Peptide by Fragment Molecular Orbital Method

Koichiro Kato


The Japan Society of Applied Physics | 2014

First Principles DFT study of Histidine Adsorption on hydrated ZnO Nanocluster

Koichiro Kato

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Masahiko Machida

Japan Atomic Energy Agency

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Motoyuki Shiga

Japan Atomic Energy Agency

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