Krzysztof Skrzypiec
Maria Curie-Skłodowska University
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Featured researches published by Krzysztof Skrzypiec.
Biochimica et Biophysica Acta | 2013
Agnieszka Zdybicka-Barabas; Sylwia Stączek; Paweł Mak; Krzysztof Skrzypiec; Ewaryst Mendyk; Małgorzata Cytryńska
Insect immune response relies on the humoral and cellular mechanisms of innate immunity. The key factors are the antimicrobial polypeptides that act in concert against invading pathogens. Several such components, e.g. apolipophorin III (apoLp-III), lysozyme, and anionic peptide 2, are present constitutively in the hemolymph of non-challenged Galleria mellonella larvae. In the present study, we demonstrate an evidence for a synergistic action of G. mellonella lysozyme and apoLp-III against Gram-negative bacteria, providing novel insights into the mode of action of these proteins in insect antimicrobial defense. It was found that the muramidase activity of G. mellonella lysozyme considerably increased in the presence of apoLp-III. Moreover, apoLp-III enhanced the permeabilizing activity of lysozyme toward Escherichia coli cells. As shown using non-denaturing PAGE, the proteins did not form intermolecular complexes in vivo and in vitro, indicating that the effect observed was not connected with the intermolecular interactions between the proteins. Analysis of AFM images of E. coli cells exposed to G. mellonella lysozyme and/or apoLp-III revealed evident alterations in the bacterial surface structure accompanied by the changes in their biophysical properties. The bacterial cells demonstrated significant differences in elasticity, reflected by Youngs modulus, as well as in adhesive forces and roughness values in comparison to the control ones. The constitutive presence of these two defense molecules in G. mellonella hemolymph and the fact that apoLp-III enhances lysozyme muramidase and perforating activities indicate that they can be regarded as important antibacterial factors acting at the early stage of infection against Gram-negative as well as Gram-positive bacteria.
Biochimica et Biophysica Acta | 2012
Agnieszka Zdybicka-Barabas; Paweł Mak; Anna Klys; Krzysztof Skrzypiec; Ewaryst Mendyk; Marta J. Fiołka; Małgorzata Cytryńska
Lysozyme and antimicrobial peptides are key factors of the humoral immune response in insects. In the present work lysozyme and anionic defense peptide (GMAP2) were isolated from the hemolymph of the greater wax moth Galleria mellonella and their antibacterial activity was investigated. Adsorption of G. mellonella lysozyme on the cell surface of Gram-positive and Gram-negative bacteria was demonstrated using immunoblotting with anti-G. mellonella lysozyme antibodies. Lysozyme effectively inhibited the growth of selected Gram-positive bacteria, which was accompanied by serious alterations of the cell surface, as revealed by atomic force microscopy (AFM) imaging. G. mellonella lysozyme used in concentrations found in the hemolymph of naive and immunized larvae, perforated also the Escherichia coli cell membrane and the level of such perforation was considerably increased by GMAP2. GMAP2 used alone did not perforate E. coli cells nor influence lysozyme muramidase activity. However, the peptide induced a decrease in the turgor pressure of the bacterial cell. Moreover, in the samples of bacteria treated with a mixture of lysozyme and GMAP2 the sodium chloride crystals were found, suggesting disturbance of ion transport across the membrane leading to cell disruption. These results clearly indicated the synergistic action of G. mellonella lysozyme and anionic peptide 2 against Gram-negative bacteria. The reported results suggested that, thanks to immune factors constitutively present in hemolymph, G. mellonella larvae are to some extent protected against infection caused by Gram-negative bacteria.
Journal of Insect Physiology | 2012
Agnieszka Zdybicka-Barabas; Sylwia Stączek; Paweł Mak; Tomasz Piersiak; Krzysztof Skrzypiec; Małgorzata Cytryńska
Galleria mellonella apolipophorin III (apoLp-III) has been implicated in the innate immune response against bacterial infections. The protein binds components of bacterial cell wall and inhibits growth of selected Gram-positive and Gram-negative bacteria. Interaction of apoLp-III with fungal β-1,3-glucan suggests antifungal properties of the protein. In the present study, the effect of apoLp-III on the growth, metabolic activity and cell surface characteristics of selected yeasts and filamentous fungi was investigated using light, confocal and atomic force microscopy. ApoLp-III bound to the cell surface of different yeasts and filamentous fungi as confirmed by immunoblotting with anti-apoLp-III antibodies. Incubation of the fungi in the presence of apoLp-III induced alterations in growth morphology. Candida albicans underwent transition from yeast-like to hyphal growth with formation of true hyphae, whereas Fusarium oxysporum hyphae exhibited decreased metabolic activity, increased vacuolization and appearance of numerous monophialids with microconidia. Atomic force microscopy imaging demonstrated evident alterations in the fungal cell surface after incubation with apoLp-III, suggesting that the protein affected the cell wall components.
Microbiological Research | 2016
Aneta Sowa-Jasiłek; Agnieszka Zdybicka-Barabas; Sylwia Stączek; Jerzy Wydrych; Krzysztof Skrzypiec; Paweł Mak; Kamil Deryło; Marek Tchórzewski; Małgorzata Cytryńska
The greater wax moth Galleria mellonella has been increasingly used as a model host to determine Candida albicans virulence and efficacy of antifungal treatment. The G. mellonella lysozyme, similarly to its human counterpart, is a member of the c-type family of lysozymes that exhibits antibacterial and antifungal activity. However, in contrast to the relatively well explained bactericidal action, the mechanism of fungistatic and/or fungicidal activity of lysozymes is still not clear. In the present study we provide the direct evidences that the G. mellonella lysozyme binds to the protoplasts as well as to the intact C. albicans cells and decreases the survival rate of both these forms in a time-dependent manner. No enzymatic activity of the lysozyme towards typical chitinase and β-glucanase substrates was detected, indicating that hydrolysis of main fungal cell wall components is not responsible for anti-Candida activity of the lysozyme. On the other hand, pre-treatment of cells with tetraethylammonium, a potassium channel blocker, prevented them from the lysozyme action, suggesting that lysozyme acts by induction of programmed cell death. In fact, the C. albicans cells treated with the lysozyme exhibited typical apoptotic features, i.e. loss of mitochondrial membrane potential, phosphatidylserine exposure in the outer leaflet of the cell membrane, as well as chromatin condensation and DNA fragmentation.
international syposium on methodologies for intelligent systems | 2015
Elżbieta Kubera; Alicja Wieczorkowska; Krzysztof Skrzypiec
Nowadays almost everybody spends a lot of time commuting and traveling, so we are all very much interested in smooth use of various roads. Also governing bodies are concerned to assure efficient exploitation of the transportation system. The European Union announced a directive on Intelligent Transport Systems in 2010, to ensure that systems integrating information technology with transport engineering are deployed within the Union. In this paper we address automatic classification of vehicle type, based on audio signals only. Hierarchical classification of vehicles is applied, using decision trees, random forests, artificial neural networks, and support vector machines. A dedicated feature set is proposed, based on spectral ranges best separating the target classes. We show that longer analyzing frames yield better results, and a set of binary classifiers performs better than a single multi-class classifier.
Revised Selected Papers of the 4th International Workshop on New Frontiers in Mining Complex Patterns - Volume 9607 | 2015
Alicja Wieczorkowska; Elżbieta Kubera; Tomasz Słowik; Krzysztof Skrzypiec
In this paper we address automatic vehicle identification based on audio information. Such data are complicated, as they depend on vehicle type, tires, speed and its change. In our previous research we designed a feature set for selected vehicle classes, discriminating pairs of classes. Now, we decided to expand the feature vector and find the best feature set (mainly based on spectral descriptors), possibly representative for each investigated vehicle category, which can be applied to a bigger data set, with more classes. The paper also shows problems related to vehicles classification, which is detailed in official documents by national authority for issues related to the national road system, but simplified for automatic identification purposes. Experiments on audio-based vehicle type identification are presented and conclusions are shown.
Journal of Intelligent Information Systems | 2018
Alicja Wieczorkowska; Elżbieta Kubera; Tomasz Słowik; Krzysztof Skrzypiec
In this paper we address automatic vehicle and engine identification based on audio information. Such data depend on many factors, including vehicle type, tires, speed and its change, as well as road type. In our previous research we designed a feature set for selected vehicle classes, discriminating pairs of classes. Later, we decided to expand the feature vector and find the best feature set (mainly based on spectral descriptors), possibly representative for each investigated vehicle category, which can be applied to a bigger data set, with more classes. The experiments were performed first on on-road recordings, and then continued with test bench (dyno) recordings. The paper also shows problems related to vehicles classification, which is detailed in official documents by national authority for issues related to the national road system, but simplified for automatic identification purposes. Experiments on audio-based vehicle type and engine type identification are presented and conclusions are shown.
International Workshop on New Frontiers in Mining Complex Patterns | 2016
Elżbieta Kubera; Alicja Wieczorkowska; Tomasz Słowik; Andrzej Kuranc; Krzysztof Skrzypiec
Vehicle speed is an important factor influencing highway traffic safety. Radars are applied to control the speed of vehicles, but the drivers often decelerate when approaching radar, and then accelerate after passing by. We address automatic recognition of speed change from audio data, based on recordings taken in controlled conditions. Data description and classification experiments illustrate both changing speed and maintaining constant speed. This is a starting point to investigate what percentage of drivers actually maintain constant speed, or slow down only to speed up immediately afterwards. Automatic classification and building an appropriate database can help improving traffic safety.
Amino Acids | 2018
Agnieszka Zdybicka-Barabas; Sylwia Stączek; Bożena Pawlikowska-Pawlęga; Paweł Mak; Rafal Luchowski; Krzysztof Skrzypiec; Ewaryst Mendyk; Jerzy Wydrych; Wiesław I. Gruszecki; Małgorzata Cytryńska
Cecropins constitute an important family of insect antimicrobial peptides involved in humoral innate immune response. In comparison with the highly basic cecropins A and B, cecropins D are less cationic and more hydrophobic. Interestingly, cecropins D were described only in lepidopteran insects, e.g., the greater wax moth Galleria mellonella. In the present study, interactions of neutral cecropin D (pI 6.47) purified from hemolymph of G. mellonella with living Escherichia coli cells were investigated. Fluorescence lifetime imaging microscopy using fluorescein isothiocyanate-labeled cecropin D revealed very fast binding of the peptide to E. coli cells. Fourier transform infrared spectroscopy analyses showed that G. mellonella cecropin D interacted especially with E. coli LPS and probably other lipid components of the bacterial cell envelope and exhibited an ordering effect with regard to lipid chains. This effect is consistent with the peptide binding mechanism based upon its incorporation into the lipid phase of the cell membrane. The interaction resulted in permeabilization of the bacterial cell membrane. Upon cecropin D binding, the cells lost characteristic surface topography, which was accompanied by altered nanomechanical properties, as revealed by atomic force microscopy. The interaction of the peptide with the bacterial cells also led to intracellular damage, i.e., loss of the cell envelope multilayer structure, formation of membrane vesicles, and enlargement of periplasmic space, which eventually caused death of the bacteria. In summary, it can be concluded that amphipathic character of α-helices, exposure of small positively charged patches on their polar surfaces and hydrophobic interactions are important physicochemical characteristics related to effective binding to E. coli cells and antibacterial activity of neutral G. mellonella cecropin D.
European Polymer Journal | 2009
Anna Kultys; Magdalena Rogulska; Stanisław Pikus; Krzysztof Skrzypiec