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Featured researches published by L.A. Modlin.


Nature Medicine | 2014

An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage.

Aaron M. Newman; Scott V. Bratman; Jacqueline To; Jacob Wynne; Neville Eclov; L.A. Modlin; Chih Long Liu; Joel W. Neal; Heather A. Wakelee; Robert E. Merritt; Joseph B. Shrager; Billy W. Loo; Ash A. Alizadeh; Maximilian Diehn

Circulating tumor DNA (ctDNA) is a promising biomarker for noninvasive assessment of cancer burden, but existing ctDNA detection methods have insufficient sensitivity or patient coverage for broad clinical applicability. Here we introduce cancer personalized profiling by deep sequencing (CAPP-Seq), an economical and ultrasensitive method for quantifying ctDNA. We implemented CAPP-Seq for non–small-cell lung cancer (NSCLC) with a design covering multiple classes of somatic alterations that identified mutations in >95% of tumors. We detected ctDNA in 100% of patients with stage II–IV NSCLC and in 50% of patients with stage I, with 96% specificity for mutant allele fractions down to ∼0.02%. Levels of ctDNA were highly correlated with tumor volume and distinguished between residual disease and treatment-related imaging changes, and measurement of ctDNA levels allowed for earlier response assessment than radiographic approaches. Finally, we evaluated biopsy-free tumor screening and genotyping with CAPP-Seq. We envision that CAPP-Seq could be routinely applied clinically to detect and monitor diverse malignancies, thus facilitating personalized cancer therapy.


International Journal of Radiation Oncology Biology Physics | 2012

Risk of Leptomeningeal Disease in Patients Treated With Stereotactic Radiosurgery Targeting the Postoperative Resection Cavity for Brain Metastases

Banu Atalar; L.A. Modlin; Clara Y.H. Choi; John R. Adler; Iris C. Gibbs; Steven D. Chang; Griffith R. Harsh; Gordon Li; Seema Nagpal; Alexandra L. Hanlon; Scott G. Soltys

PURPOSE We sought to determine the risk of leptomeningeal disease (LMD) in patients treated with stereotactic radiosurgery (SRS) targeting the postsurgical resection cavity of a brain metastasis, deferring whole-brain radiation therapy (WBRT) in all patients. METHODS AND MATERIALS We retrospectively reviewed 175 brain metastasis resection cavities in 165 patients treated from 1998 to 2011 with postoperative SRS. The cumulative incidence rates, with death as a competing risk, of LMD, local failure (LF), and distant brain parenchymal failure (DF) were estimated. Variables associated with LMD were evaluated, including LF, DF, posterior fossa location, resection type (en-bloc vs piecemeal or unknown), and histology (lung, colon, breast, melanoma, gynecologic, other). RESULTS With a median follow-up of 12 months (range, 1-157 months), median overall survival was 17 months. Twenty-one of 165 patients (13%) developed LMD at a median of 5 months (range, 2-33 months) following SRS. The 1-year cumulative incidence rates, with death as a competing risk, were 10% (95% confidence interval [CI], 6%-15%) for developing LF, 54% (95% CI, 46%-61%) for DF, and 11% (95% CI, 7%-17%) for LMD. On univariate analysis, only breast cancer histology (hazard ratio, 2.96) was associated with an increased risk of LMD. The 1-year cumulative incidence of LMD was 24% (95% CI, 9%-41%) for breast cancer compared to 9% (95% CI, 5%-14%) for non-breast histology (P=.004). CONCLUSIONS In patients treated with SRS targeting the postoperative cavity following resection, those with breast cancer histology were at higher risk of LMD. It is unknown whether the inclusion of whole-brain irradiation or novel strategies such as preresection SRS would improve this risk or if the rate of LMD is inherently higher with breast histology.


Cancer Discovery | 2017

Early detection of molecular residual disease in localized lung cancer by circulating tumor DNA profiling

Aadel A. Chaudhuri; Jacob J. Chabon; Alexander F. Lovejoy; Aaron M. Newman; Henning Stehr; Tej D. Azad; Michael S. Khodadoust; Mohammad Shahrokh Esfahani; Chih Long Liu; Li Zhou; Florian Scherer; David M. Kurtz; Carmen Say; J.N. Carter; D.J. Merriott; Jonathan C. Dudley; Michael S. Binkley; L.A. Modlin; Sukhmani K. Padda; M.F. Gensheimer; Robert B. West; Joseph B. Shrager; Joel W. Neal; Heather A. Wakelee; Billy W. Loo; Ash A. Alizadeh; Maximilian Diehn

Identifying molecular residual disease (MRD) after treatment of localized lung cancer could facilitate early intervention and personalization of adjuvant therapies. Here, we apply cancer personalized profiling by deep sequencing (CAPP-seq) circulating tumor DNA (ctDNA) analysis to 255 samples from 40 patients treated with curative intent for stage I-III lung cancer and 54 healthy adults. In 94% of evaluable patients experiencing recurrence, ctDNA was detectable in the first posttreatment blood sample, indicating reliable identification of MRD. Posttreatment ctDNA detection preceded radiographic progression in 72% of patients by a median of 5.2 months, and 53% of patients harbored ctDNA mutation profiles associated with favorable responses to tyrosine kinase inhibitors or immune checkpoint blockade. Collectively, these results indicate that ctDNA MRD in patients with lung cancer can be accurately detected using CAPP-seq and may allow personalized adjuvant treatment while disease burden is lowest.Significance: This study shows that ctDNA analysis can robustly identify posttreatment MRD in patients with localized lung cancer, identifying residual/recurrent disease earlier than standard-of-care radiologic imaging, and thus could facilitate personalized adjuvant treatment at early time points when disease burden is lowest. Cancer Discov; 7(12); 1394-403. ©2017 AACR.See related commentary by Comino-Mendez and Turner, p. 1368This article is highlighted in the In This Issue feature, p. 1355.


Seminars in Radiation Oncology | 2016

Dose-Response Modeling of the Visual Pathway Tolerance to Single-Fraction and Hypofractionated Stereotactic Radiosurgery☆☆☆

Susan M. Hiniker; L.A. Modlin; Clara Y.H. Choi; Banu Atalar; Kira Seiger; Michael S. Binkley; Jeremy P. Harris; Yaping Joyce Liao; Nancy J. Fischbein; L Wang; Anthony Ho; A Lo; Steven D. Chang; Griffith R. Harsh; Iris C. Gibbs; Steven L. Hancock; Gordon Li; John R. Adler; Scott G. Soltys

Patients with tumors adjacent to the optic nerves and chiasm are frequently not candidates for single-fraction stereotactic radiosurgery (SRS) due to concern for radiation-induced optic neuropathy. However, these patients have been successfully treated with hypofractionated SRS over 2-5 days, though dose constraints have not yet been well defined. We reviewed the literature on optic tolerance to radiation and constructed a dose-response model for visual pathway tolerance to SRS delivered in 1-5 fractions. We analyzed optic nerve and chiasm dose-volume histogram (DVH) data from perioptic tumors, defined as those within 3mm of the optic nerves or chiasm, treated with SRS from 2000-2013 at our institution. Tumors with subsequent local progression were excluded from the primary analysis of vision outcome. A total of 262 evaluable cases (26 with malignant and 236 with benign tumors) with visual field and clinical outcomes were analyzed. Median patient follow-up was 37 months (range: 2-142 months). The median number of fractions was 3 (1 fraction n = 47, 2 fraction n = 28, 3 fraction n = 111, 4 fraction n = 10, and 5 fraction n = 66); doses were converted to 3-fraction equivalent doses with the linear quadratic model using α/β = 2Gy prior to modeling. Optic structure dose parameters analyzed included Dmin, Dmedian, Dmean, Dmax, V30Gy, V25Gy, V20Gy, V15Gy, V10Gy, V5Gy, D50%, D10%, D5%, D1%, D1cc, D0.50cc, D0.25cc, D0.20cc, D0.10cc, D0.05cc, D0.03cc. From the plan DVHs, a maximum-likelihood parameter fitting of the probit dose-response model was performed using DVH Evaluator software. The 68% CIs, corresponding to one standard deviation, were calculated using the profile likelihood method. Of the 262 analyzed, 2 (0.8%) patients experienced common terminology criteria for adverse events grade 4 vision loss in one eye, defined as vision of 20/200 or worse in the affected eye. One of these patients had received 2 previous courses of radiotherapy to the optic structures. Both cases were meningiomas treated with 25Gy in 5 fractions, with a 3-fraction equivalent optic nerve Dmax of 19.2 and 22.2Gy. Fitting these data to a probit dose-response model enabled risk estimates to be made for these previously unvalidated optic pathway constraints: the Dmax limits of 12Gy in 1 fraction from QUANTEC, 19.5Gy in 3 fractions from Timmerman 2008, and 25Gy in 5 fractions from AAPM Task Group 101 all had less than 1% risk. In 262 patients with perioptic tumors treated with SRS, we found a risk of optic complications of less than 1%. These data support previously unvalidated estimates as safe guidelines, which may in fact underestimate the tolerance of the optic structures, particularly in patients without prior radiation. Further investigation would refine the estimated normal tissue complication probability for SRS near the optic apparatus.


International Journal of Radiation Oncology Biology Physics | 2014

Survival and Neurocognitive Outcomes After Cranial or Craniospinal Irradiation Plus Total-Body Irradiation Before Stem Cell Transplantation in Pediatric Leukemia Patients With Central Nervous System Involvement

Susan M. Hiniker; Rajni Agarwal; L.A. Modlin; Christine C. Gray; Jeremy P. Harris; Lynn Million; Eileen F. Kiamanesh; Sarah S. Donaldson

PURPOSE To evaluate survival and neurocognitive outcomes in pediatric acute lymphoblastic leukemia (ALL) patients with central nervous system (CNS) involvement treated according to an institutional protocol with stem cell transplantation (SCT) and a component of craniospinal irradiation (CSI) in addition to total-body irradiation (TBI) as preparative regimen. METHODS AND MATERIALS Forty-one pediatric ALL patients underwent SCT with TBI and received additional cranial irradiation or CSI because of CNS leukemic involvement. Prospective neurocognitive testing was performed before and after SCT in a subset of patients. Cox regression models were used to determine associations of patient and disease characteristics and treatment methods with outcomes. RESULTS All patients received a cranial radiation boost; median total cranial dose was 24 Gy. Eighteen patients (44%) received a spinal boost; median total spinal dose for these patients was 18 Gy. Five-year disease-free survival (DFS) for all patients was 67%. Those receiving CSI had a trend toward superior DFS compared with those receiving a cranial boost alone (hazard ratio 3.23, P=.14). Patients with isolated CNS disease before SCT had a trend toward superior DFS (hazard ratio 3.64, P=.11, 5-year DFS 74%) compared with those with combined CNS and bone marrow disease (5-year DFS 59%). Neurocognitive testing revealed a mean post-SCT overall intelligence quotient of 103.7 at 4.4 years. Relative deficiencies in processing speed and/or working memory were noted in 6 of 16 tested patients (38%). Pre- and post-SCT neurocognitive testing revealed no significant change in intelligence quotient (mean increase +4.7 points). At a mean of 12.5 years after transplant, 11 of 13 long-term survivors (85%) had completed at least some coursework at a 2- or 4-year college. CONCLUSION The addition of CSI to TBI before SCT in pediatric ALL with CNS involvement is effective and well-tolerated. Craniospinal irradiation plus TBI is worthy of further protocol investigation in children with CNS leukemia.


International Journal of Radiation Oncology Biology Physics | 2016

A Phase I/II Trial of 5 Fraction Stereotactic Radiosurgery With 5-mm Margins With Concurrent and Adjuvant Temozolomide in Newly Diagnosed Supratentorial Glioblastoma Multiforme.

M. Azoulay; C.K. Ho; D.K. Fujimoto; L.A. Modlin; Iris C. Gibbs; Steven L. Hancock; Gloria C. Li; Steven D. Chang; John R. Adler; Griffith R. Harsh; Seema Nagpal; Reena Thomas; Lawrence Recht; Clara Y.H. Choi; Scott G. Soltys

The spine cases included a fifth lumbar spine (case 1), fifth thoracic spine (case 2), and 10th thoracic spine metastases (case 3). Targets and organs at risk (OAR) were contoured by one experienced radiation oncologist according to International Spine Radiosurgery Consortium Consensus Guidelines and a 2 mm planning target volume (PTV) applied. The DICOM files were sent to each institute for planning. The treatment planning guidelines in the previous study included, prescribed dose of 24 Gy in two fractions with more than 70% prescribed dose to encompass D95, D0.035 <140% of the prescribed dose, and a maximum dose to the spinal cord planning organ at risk volume (PRV) or thecal sac <17 Gy. New guidelines added (D95 should be as high as possible (AHAP), D50 should be between 110% and 115% of prescribed dose and AHAP and D0.035 should be between 125% and 135% of the prescribed dose). The dose volume histograms (DVHs) were centrally reviewed. Results: In our previous study the PTV D95 ranged from 70.0% to 99.6% in case 1 (mean SD; 21.21 2.43 Gy), 70.4% to 98.8% in case 2 (20.32 2.22 Gy), and 70.0% to 94.2% in case 3 (19.78 1.97 Gy), respectively, and D50 for PTV ranged from 99.2% to 116.3% in case 1 (25.62 1.34 Gy), 91.7% to 119.6% in case 2 (25.97 2.18 Gy) and 84.2% to 114.2% in case 3 (25.57 2.14 Gy), respectively. In this study PTV D95 ranged from 80.4% to 100.0% in case 1 (21.96 1.67 Gy), 76.3% to 95.8% in case 2 (20.91 1.67 Gy), and 70.4% to 94.2% in case 3 (20.3 1.86 Gy), respectively and D50 for PTV ranged from 109.6% to 115.4% in case 1 (27.02 0.53 Gy), 110.0% to 117.5% in case 2 (27.06 0.63 Gy) and 107.5% to 115.0% in case 3 (26.89 0.67 Gy), respectively. Conclusion: We succeeded to minimize the inter-institutional variations. This study highlights dose constraints of D95, D50, and D0.035 should be used to minimize the variations. Author Disclosure: H. Tanaka: None. T. Furuya: None. Y. Kumazaki: None. M. Nakayama: None. H. Nishimura: None. M.E. Ruschin: None. D. Pinnaduwage: None. J. Phua: None. I. Thibault: None. J. StHilaire: None. L. Ma: None. A. Sahgal: None. N. Shikama: None. K. Karasawa: None.


Technology in Cancer Research & Treatment | 2016

The Parotid Gland is an Underrecognized Organ at Risk for Craniospinal Irradiation.

Martin T. King; L.A. Modlin; Lynn Million; Sarah S. Donaldson; Iris C. Gibbs; Clara Y.H. Choi; Scott G. Soltys

Purpose: Current craniospinal irradiation (CSI) protocols do not include the parotid gland as an organ at risk, potentially leading to late effects of xerostomia and secondary parotid malignancies. We analyzed the effect of CSI treatment parameters on parotid dose. Materials and Methods: We retrospectively reviewed 50 consecutive patients treated with CSI to an intracranial dose >26 Gy. Parotid dose was compared to a Radiation Therapy Oncology Group (RTOG) dose constraint (at least 1 parotid with mean dose <26 Gy). The effects of CSI dose (≤24 Gy vs 24 Gy), volumetric-modulated arc therapy (VMAT) versus 3-dimensional (3D) CSI technique, boost dose (≤24 Gy vs 24 Gy), supratentorial versus infratentorial boost location, intensity-modulated radiation therapy (IMRT)-based versus 3D boost technique, supine versus prone position, and age on parotid dose were analyzed using multivariate regression analysis. Results: The RTOG parotid dose constraint was exceeded in 22 (44%) of 50 patients. On multivariate regression analysis, lower CSI dose and VMAT CSI technique were associated with reduced parotid dose for the CSI fields. For the boost fields, lower boost dose and supratentorial boost location were associated with lower parotid dose. All 5 patients who underwent VMAT CSI met dose constraints. Furthermore, for infratentorial lesions with a total (CSI plus boost) dose prescription dose >50 Gy (n = 24), 11 of 16 patients who received low-dose CSI (18-23.4 Gy) were able to meet dose constraints, when compared to only 2 of 8 patients who received high dose CSI (36 Gy). Conclusion: Given the large number of patients exceeding the parotid dose constraint, the parotid gland should be considered an organ at risk. CSI dose de-escalation and IMRT-based CSI techniques may minimize the risk of xerostomia.


International Journal of Radiation Oncology Biology Physics | 2012

Stereotactic Radiosurgery for the Treatment of Spinal Metastases: Analysis of Tumor Control and Patterns of Failure

Scott G. Soltys; Iris C. Gibbs; John R. Adler; Steven D. Chang; L.A. Modlin; Clara Y.H. Choi

SSED* 16 (8-22) Gy10 Figure 1 The 12-month cumulative rate of local failure (LF), with death as a competing risk was 15%. Factors associated with treatment failure were prior surgery (p=0.0006), tumors presenting with epidural extension (p=0.04), and SSED (as a continuous variable) (p=0.01). The 12-month rates of LF with SSED ≤15, 15-18, and ≥18 Gy10 were 38%, 11%, and 8%, respectively (p=0.006) (Figure 1). The 12-month rates of LF with no epidural disease, thecal sac compression and cord compression were 11%, 17% and 39%, respectively (p=0.03) (Figure 2).


International Journal of Radiation Oncology Biology Physics | 2015

Repeat Courses of Stereotactic Radiosurgery (SRS), Deferring Whole-Brain Irradiation, for New Brain Metastases After Initial SRS

D.B. Shultz; L.A. Modlin; Priya Jayachandran; Rie von Eyben; Iris C. Gibbs; Clara Y.H. Choi; Steven D. Chang; Griffith R. Harsh; Gordon Li; John R. Adler; Steven L. Hancock; Scott G. Soltys


International Journal of Radiation Oncology Biology Physics | 2015

Vorinostat and Concurrent Stereotactic Radiosurgery for Non-Small Cell Lung Cancer Brain Metastases: A Phase 1 Dose-Escalation Trial

Clara Y.H. Choi; Heather A. Wakelee; Joel W. Neal; Mary Pinder-Schenck; Hsiang-Hsuan Michael Yu; Steven D. Chang; John R. Adler; L.A. Modlin; Griffith R. Harsh; Scott G. Soltys

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