Laure Barthes

Testing interactive effects of global environmental changes on soil nitrogen cycling

Responses of soil nitrogen (N) cycling to simultaneous and potentially interacting global environmental changes are uncertain. Here, we investigated the combined effects of elevated CO2, warming, increased precipitation and enhanced N supply on soil N cycling in an annual grassland ecosystem as part of the Jasper Ridge Global Change Experiment (CA, USA). This field experiment included four treatments-CO2, temperature, precipitation, nitrogen-with two levels per treatment (ambient and elevated), and all their factorial combinations replicated six times. We collected soil samples after 7 and 8 years of treatments, and measured gross rates of N mineralization, N immobilization and nitrification, along with potential rates of ammonia oxidation, nitrite oxidation and denitrification. We also determined the main drivers of these microbial activities (soil ammonium and nitrate concentrations, soil moisture, soil temperature, soil pH, and soil CO2 efflux, as an indicator of soil heterotrophic activity). We found that gross N mineralization responded to the interactive effects of the CO2, precipitation and N treatments: N addition increased gross N mineralization when CO2 and precipitation were either both at ambient or both at elevated levels. However, we found limited evidence for interactions among elevated CO2, warming, increased precipitation, and enhanced N supply on the other N cycling processes examined: statistically significant interactions, when found, tended not to persist across multiple dates. Soil N cycling responded mainly to single-factor effects: long-term N addition increased gross N immobilization, potential ammonia oxidation and potential denitrification, while increased precipitation depressed potential nitrite oxidation and increased potential ammonia oxidation and potential denitrification. In contrast, elevated CO2 and modest warming did not significantly affect any of these microbial N transformations. These findings suggest that global change effects on soil N cycling are primarily additive, and therefore generally predictable from single factor studies.

Responses of Fraxinus excelsior seedlings to grass-induced above- and below-ground competition

The competitive interactions between woody seedlings and herbaceous vegetation have received increasing interest in recent years. However, little is known about the relative contributions and underlying mechanisms of above- and below-ground competition between species. We used a novel experimental approach to assess the responses of Fraxinus excelsior seedlings to different combinations of root and shoot competition imposed by the grass Dactylis glomerata under greenhouse conditions. Seedling growth was significantly reduced by competition for soil resources, but neither biomass nor height were significantly affected by shoot competition for light. Competitive response indices based on biomass confirmed that below-ground competition was more important than above-ground competition, and indicated that root and shoot competition did not interact to influence plant growth. Fraxinus biomass allocation and seedling traits were almost all significantly affected by root competition; these responses varied depending on the trait examined. In contrast, morphological responses to shoot competition were limited. In the absence of root competition, seedlings showed a significant increase in the biomass allocated to leaves and a greater leaf area ratio in response to shoot competition. Our findings suggest that morphological modifications help to mitigate the negative effects of competition, but the expression of plasticity may be suboptimal due to resource constraints. The present study also highlights the importance of appropriate experimental controls and analysis to avoid confounding effects of experimental design and ontogeny on the interpretation of competitive responses.

Global Change Could Amplify Fire Effects on Soil Greenhouse Gas Emissions

Background Little is known about the combined impacts of global environmental changes and ecological disturbances on ecosystem functioning, even though such combined impacts might play critical roles in shaping ecosystem processes that can in turn feed back to climate change, such as soil emissions of greenhouse gases. Methodology/Principal Findings We took advantage of an accidental, low-severity wildfire that burned part of a long-term global change experiment to investigate the interactive effects of a fire disturbance and increases in CO2 concentration, precipitation and nitrogen supply on soil nitrous oxide (N2O) emissions in a grassland ecosystem. We examined the responses of soil N2O emissions, as well as the responses of the two main microbial processes contributing to soil N2O production – nitrification and denitrification – and of their main drivers. We show that the fire disturbance greatly increased soil N2O emissions over a three-year period, and that elevated CO2 and enhanced nitrogen supply amplified fire effects on soil N2O emissions: emissions increased by a factor of two with fire alone and by a factor of six under the combined influence of fire, elevated CO2 and nitrogen. We also provide evidence that this response was caused by increased microbial denitrification, resulting from increased soil moisture and soil carbon and nitrogen availability in the burned and fertilized plots. Conclusions/Significance Our results indicate that the combined effects of fire and global environmental changes can exceed their effects in isolation, thereby creating unexpected feedbacks to soil greenhouse gas emissions. These findings highlight the need to further explore the impacts of ecological disturbances on ecosystem functioning in the context of global change if we wish to be able to model future soil greenhouse gas emissions with greater confidence.

Responses of soil nitrogen cycling to the interactive effects of elevated CO2 and inorganic N supply

Despite increasing interest in the effects of climate change on soil processes, the response of nitrification to elevated CO2 remains unclear. Responses may depend on soil nitrogen (N) status, and inferences may vary depending on the methodological approach used. We investigated the interactive effects of elevated CO2 and inorganic N supply on gross nitrification (using 15N pool dilution) and potential nitrification (using nitrifying enzyme activity assays) in Dactylis glomerata mesocosms. We measured the responses of putative drivers of nitrification (NH4+ production, NH4+ consumption, and soil environmental conditions) and of potential denitrification, a process functionally linked to nitrification. Gross nitrification was insensitive to all treatments, whereas potential nitrification was higher in the high N treatment and was further stimulated by elevated CO2 in the high N treatment. Gross mineralization and NH4+ consumption rates were also significantly increased in response to elevated CO2 in the high N treatment, while potential denitrification showed a significant increase in response to N addition. The discrepancy between the responses of gross and potential nitrification to elevated CO2 and inorganic N supply suggest that these measurements provide different information, and should be used as complementary approaches to understand nitrification response to global change.

Predicting the Responses of Soil Nitrite-Oxidizers to Multi-Factorial Global Change: A Trait-Based Approach.

Soil microbial diversity is huge and a few grams of soil contain more bacterial taxa than there are bird species on Earth. This high diversity often makes predicting the responses of soil bacteria to environmental change intractable and restricts our capacity to predict the responses of soil functions to global change. Here, using a long-term field experiment in a California grassland, we studied the main and interactive effects of three global change factors (increased atmospheric CO2 concentration, precipitation and nitrogen addition, and all their factorial combinations, based on global change scenarios for central California) on the potential activity, abundance and dominant taxa of soil nitrite-oxidizing bacteria (NOB). Using a trait-based model, we then tested whether categorizing NOB into a few functional groups unified by physiological traits enables understanding and predicting how soil NOB respond to global environmental change. Contrasted responses to global change treatments were observed between three main NOB functional types. In particular, putatively mixotrophic Nitrobacter, rare under most treatments, became dominant under the ‘High CO2+Nitrogen+Precipitation’ treatment. The mechanistic trait-based model, which simulated ecological niches of NOB types consistent with previous ecophysiological reports, helped predicting the observed effects of global change on NOB and elucidating the underlying biotic and abiotic controls. Our results are a starting point for representing the overwhelming diversity of soil bacteria by a few functional types that can be incorporated into models of terrestrial ecosystems and biogeochemical processes.