Leslie Leiserowitz

Principles and applications of grazing incidence X-ray and neutron scattering from ordered molecular monolayers at the air-water interface

Abstract The advent of well collimated, high intensity synchroton X-ray sources and the consequent development of surface-specific X-ray diffraction and fluorescence techniques have recently revolutionized the study of Langmuir monolayers at the air-liquid interface. These methods allowed for the first time the determination of the in-plane and vertical structure of such monolayers with a resolution approaching the atomic level. We briefly describe these methods, including grazing incidence X-ray diffraction, specular reflectivity, Bragg rods, standing waves and surface fluorescence techniques, and review recent results obtained for Langmuir films from their use. The methods have been successfully applied for the elucidation of the structure of crystalline aggregates of amphiphilic molecules at the water surface such as alcohols, carboxylic acids and their salts, α-amino acids and phospholipids. In addition, it became possible to monitor by diffraction the growth and dissolution of the crystalline self-aggregates as well as structural changes occuring by phase transitions. Furthermore, via the surface X-ray methods, new light is shed on the structure of the underlying attached solvent or solute ionic layer. Examples are given where singly or doubly charged ions bound to the two-dimensional (2D) crystal form either an ordered or diffuse counter-ionic layer. Finally, the surface diffraction methods provide data on transfer of structural information from 2D clusters to 3D single crystals which had been succesfully accomplished by epitaxial-like crystallization both in organic and inorganic crystals.

Biological Control of Crystal Texture: A Widespread Strategy for Adapting Crystal Properties to Function

Textures of calcite crystals from a variety of mineralized tissues belonging to organisms from four phyla were examined with high-resolution synchrotron x-ray radiation. Significant differences in coherence length and angular spread were observed between taxonomic groups. Crystals from polycrystalline skeletal ensembles were more perfect than those that function as single-crystal elements. Different anisotropic effects on crystal texture were observed for sea urchin and mollusk calcite crystals, whereas none was found for the foraminifer, Patellina, and the control calcite crystals. These results show that the manipulation of crystal texture in different organisms is under biological control and that crystal textures in some tissues are adapted to function. A better understanding of this apparently widespread biological phenomenon may provide new insights for improving synthetic crystal-containing materials.

Ice Nucleation by Alcohols Arranged in Monolayers at the Surface of Water Drops

Monolayers of aliphatic long-chain alcohols induced nucleation of ice at temperatures approaching 0�C, in contrast with water-soluble alcohols, which are effective antifreeze agents. The corresponding fatty acids, or alcohols with bulky hydrophobic groups, induce freezing at temperatures as much as 12�C lower. The freezing point induced by the amphiphilic alcohols was sensitive not only to surface area per molecule but, for the aliphatic series (CnH2n + 1OH), to chain length and parity. The freezing point for chains with n odd reached an asymptotic temperature of 0�C for an upper value of n = 31; for n even the freezing point reached a plateau of -8�C for n in the upper range of 22 to 30. The higher freezing point induced by the aliphatic alcohols is due to formation of ordered clusters in the uncompressed state as detected by grazing incidence synchrotron x-ray diffraction measurements. The diffraction data indicate a close lattice match with the ab layer of hexagonal ice.

The antimalarial ferroquine: role of the metal and intramolecular hydrogen bond in activity and resistance.

Inhibition of hemozoin biocrystallization is considered the main mechanism of action of 4-aminoquinoline antimalarials including chloroquine (CQ) but cannot fully explain the activity of ferroquine (FQ) which has been related to redox properties and intramolecular hydrogen bonding. Analogues of FQ, methylferroquine (Me-FQ), ruthenoquine (RQ), and methylruthenoquine (Me-RQ), were prepared. Combination of physicochemical and molecular modeling methods showed that FQ and RQ favor intramolecular hydrogen bonding between the 4-aminoquinoline NH group and the terminal amino group in the absence of water, suggesting that this structure may enhance its passage through the membrane. This was further supported by the use of Me-FQ and Me-RQ where the intramolecular hydrogen bond cannot be formed. Docking studies suggest that FQ can interact specifically with the {0,0,1} and {1,0,0} faces of hemozoin, blocking crystal growth. With respect to the structure-activity relationship, the antimalarial activity on 15 different P. falciparum strains showed that the activity of FQ and RQ were correlated with each other but not with CQ, confirming lack of cross resistance. Conversely, Me-FQ and Me-RQ showed significant cross-resistance with CQ. Mutations or copy number of pfcrt, pfmrp, pfmdr1, pfmdr2, or pfnhe-1 did not exhibit significant correlations with the IC(50) of FQ or RQ. We next showed that FQ and Me-FQ were able to generate hydroxyl radicals, whereas RQ and me-RQ did not. Ultrastructural studies revealed that FQ and Me-FQ but not RQ or Me-RQ break down the parasite digestive vacuole membrane, which could be related to the ability of the former to generate hydroxyl radicals.

Interplay Between Malaria, Crystalline Hemozoin Formation, and Antimalarial Drug Action and Design

This review on the interplay between malaria, antimalarial drugs, and hemozoin crystals is directed, on one hand, to biologists and pharmaceutical chemists who wish to have a broader knowledge of the crystalline state related to malaria and, on the other hand, to crystallographers and physical chemists who wish to have a simple introduction to the disease and drugs employed against it. The call for this review is dictated by various considerations, not the least being the need for new antimalarial drugs, in view of developing parasitic resistance to the commonly used ones. The increasing spread of malaria is also due to several other contributing factors; besides climatic and environmental factors, the Anopheles mosquito has become increasingly resistant to insecticides and has adapted so as to avoid * To whom correspondence should be addressed. E-mail: (I.W.) isabelle.weissbuch@weizmann.ac.il or (L.L.) leslie.leiserowitz@weizmann.ac.il. The review represents the fruits, the offshoot, one may say, that may be reaped from the experience and knowledge gleaned from a collaborative effort, extending for more than a quarter of a century, on the design and use of auxiliaries for the control of crystal nucleation, morphology, and polymorphism, the structure determination of monoand multilayer films of amphiphilic molecules by grazing incidence synchrotron X-ray diffraction at the air-liquid interface, and computational studies of molecular interactions at interfaces and in the crystal bulk. These studies have been conducted in close collaboration with Meir Lahav and with other colleagues. Chem. Rev. 2008, 108, 4899–4914 4899

Many-Body Dispersion Interactions in Molecular Crystal Polymorphism

Polymorphs of molecular crystals are often very close in energy, yet they may possess very different physical and chemical properties. The understanding of polymorphism is therefore of great importance for a variety of applications, ranging from drug design to nonlinear optics and hydrogen storage. While the crystal structure prediction blind tests conducted by the Cambridge Crystallographic Data Centre have shown steady progress toward reliable structure prediction for molecular crystals, several challenges remain, including molecular salts, hydrates, and flexible molecules with several stable conformers. The ability to identify and rank all of the relevant polymorphs of a given molecular crystal hinges on an accurate description of their relative energetic stability. Hence, a first-principles quantum mechanical method that can attain the required accuracy of around 0.1–0.2 kcalmol 1 would clearly be an indispensable tool for polymorph prediction. In this work, we show that accounting for the nonadditive many-body dispersion (MBD) energy beyond the standard pairwise approximation is crucial for the correct qualitative and quantitative description of polymorphism in molecular crystals. We demonstrate this through three fundamental and stringent benchmark examples: glycine, oxalic acid, and tetrolic acid. These systems represent a broad class of molecular crystals, comprising hydrogenbonded (H-bonded) networks of amino acids and carboxylic acids. Among the first-principles methods, density functional theory (DFT) is the most widely used approach in the study of polymorphism in molecular crystals. However, most common exchange-correlation functionals (including hybrid functionals) are based on semi-local electron correlation, and thereby fail to capture the contribution of dispersion interactions to the stability of molecular crystals. These ubiquitous noncovalent interactions are quantum mechanical in nature and correspond to the multipole moments induced in response to instantaneous fluctuations in the electron density. To incorporate these long-range electron correlation effects within DFT, significant progress has been made by using the standard C6/R 6 pairwise additive expression for the dispersion energy. Indeed, DFT with pairwise dispersion terms can yield accurate results when the energy differences between molecular crystal polymorphs are sufficiently large. Notably, Neumann et al. have achieved the highest success rate in the last two blind tests using such methods. However, these pairwise dispersion approaches, even when used in conjunction with state-of-the-art functionals, are still unable to reach the level of accuracy required to describe polymorphism in many relevant molecular crystals, including glycine and oxalic acid. Recently, a novel and efficient method for describing the many-body dispersion (MBD) energy has been developed, building upon the Tkatchenko–Scheffler (TS) pairwise method. Within the TS approach, the effective dispersion coefficients (C6) are calculated from the DFTelectron density, hence the effect of the local environment of an atom in a molecule is accurately accounted for by construction. The MBD method presents a two-fold improvement over the TS approach by including: 1) the long-range electrodynamic screening through the self-consistent solution of the dipole– dipole electric-field coupling equations for the effective polarizability, and 2) the non-pairwise-additive many-body dispersion energy to infinite order through diagonalization of the Hamiltonian corresponding to a system of coupled fluctuating dipoles. The inclusion of the MBD energy in DFT leads to a significant improvement in the binding energies between organic molecules, and for the cohesion of the benzene and oligoacene molecular crystals. The MBD energy, like the TS energy, can be added to any DFT functional, requiring only the adjustment of a single rangeseparation parameter per functional. [*] N. Marom, J. R. Chelikowsky Center for Computational Materials Institute for Computational Engineering and Sciences The University of Texas at Austin Austin, TX 78712 (USA) E-mail: noa@ices.utexas.edu

Oriented nucleation of hemozoin at the digestive vacuole membrane in Plasmodium falciparum

Heme detoxification is a critical step in the life cycle of malaria-causing parasites, achieved by crystallization into physiologically insoluble hemozoin. The mode of nucleation has profound implications for understanding the mechanism of action of antimalarial drugs that inhibit hemozoin growth. Several lines of evidence point to involvement of acylglycerol lipids in the nucleation process. Hemozoin crystals have been reported to form within lipid nanospheres; alternatively, it has been found in vitro that they are nucleated at an acylglycerol lipid–water interface. We have applied cryogenic soft X-ray tomography and three-dimensional electron microscopy to address the location and orientation of hemozoin crystals within the digestive vacuole (DV), as a signature of their nucleation and growth processes. Cryogenic soft X-ray tomography in the “water window” is particularly advantageous because contrast generation is based inherently on atomic absorption. We find that hemozoin nucleation occurs at the DV inner membrane, with crystallization occurring in the aqueous rather than lipid phase. The crystal morphology indicates a common {100} orientation facing the membrane as expected of templated nucleation. This is consistent with conclusions reached by X-ray fluorescence and diffraction in a companion work. Uniform dark spheres observed in the parasite were identified as hemoglobin transport vesicles. Their analysis supports a model of hemozoin nucleation primarily in the DV. Modeling of the contrast at the DV membrane indicates a 4-nm thickness with patches about three times thicker, possibly implicated in the nucleation.

Crystallinity of the Double Layer of Cadmium Arachidate Films at the Water Surface

A crystalline counterionic layer at the interface between an electrolyte solution and a charged layer of insoluble amphiphilic molecules was observed with grazing incidence synchrotron x-ray diffraction. Uncompressed arachidic films spread over 10–3 molar cadmium chloride solution (pH 8.8) spontaneously form crystalline clusters with coherence lengths of ∼1000 angstroms at 9�C. Ten distinct diffraction peaks were observed, seven of which were attributed to scattering only from a crystalline Cd2+ layer and the other three to scattering primarily from the arachidate layer. The reflections from the Cd2+ layer were indexed according to a 2 x 3 supercell of the arachidate lattice with three Cd2+ ions per cadmium unit cell.

Absolute configuration of chiral polar crystals

A method is described for direct determination of absolute configuration of chiral polar crystals, based on changes in crystal habit induced by tailor-made impurities. The method embodies the assignment of the direction of the chiral substrate molecule with respect to the crystal polar axis based on differences in the hemihedral faces of the substrate crystals as grown from solution in the presence and absence of impurities. The molecular packing requirements and the choice of impurities for application of this method in lysine and trans-cinnamoyl alanine are outlined.

The structure and symmetry of crystalline solid solutions: a general revision.

Mixed single crystals composed of host and guest organic molecules of similar structures and shapes are shown to comprise sectors with different host-guest distributions and to have symmetries lower than that of the host crystal. These properties are determined by the structure of the guest and the surface structures of the crystal faces through which the guest molecules are occluded. This general concept is illustrated by studies of three mixed crystal systems,(E)-cinnamamide—(E)-2-thienylacrylamide, (E)-cinnamamide—(E)-3-thienylacrylamide, and(S)-asparagine—(S)-aspartic acid, with x-ray and neutron diffraction and solid-state photochemistry.