Li-Tang Yan

Self-Assembly of Janus Nanoparticles in Diblock Copolymers

Janus nanoparticles with two chemically different compartments have been shown to be a unique class of building blocks in solution. Here we perform mesoscale simulations to explore the self-assembly of Janus nanoparticles with widely varying architectures in diblock copolymers. We demonstrate that the coassembly of these amphiphilic building blocks forms novel and tunable structures at the interfaces of block copolymers, and consequently influences the interface stabilization and structural evolution kinetics. Our simulations suggest that Janus nanoparticle self-assembly at block copolymer interfaces yields considerable control over the creation of polymer nanocomposites with improved shear behavior. In this context, the approach is a viable strategy for creating functional materials with enhanced processing properties.

Enhanced permeability of charged dendrimers across tense lipid bilayer membranes.

Dendrimers have successfully proved themselves as functional nanodevices for drug delivery because they can render drug molecules a greater water solubility, bioavailability, and biocompatibility. It has recently been suggested that the structural changes of cell membranes (e.g., local lipid density and actual pore or hole) could affect the permeability across them for dendrimers. However, to understand these effects requires direct measurements in a single cell and is thus very difficult and more challenging. Here we use mesoscopic simulations to investigate the tension-mediated complexes comprising charged dendrimers and lipid bilayer membranes. The structures of membranes are alternated by adjusting their surface tensions. Our simulations demonstrate that the permeability of charged dendrimers can be effectively enhanced in the tense membranes, and the permeability in the actual hole is several times higher than that in the lipid-poor section. The possible mechanism of charged dendrimer-induced pore nucleation in the tense membranes is evaluated. The findings have implications in tuning intracellular delivery rates and amounts in nanoscale complex and chemotherapeutics.

Computer simulation of cell entry of graphene nanosheet

Recent studies suggest the great promise of functionalized nanosized graphene in biomedical applications, but the transmembrane translocation mechanisms of this two-dimensional nanomaterial have remained poorly understood. Understanding how graphene interacts with cell membrane is related to the fundamental biological responses and cytotoxicity, and is thereby one critical issue to be resolved before further applications of graphene in nanomedicine. Here, by using computer simulations, we explore the translocation of graphene nanosheet (GN) across lipid bilayer membrane and the roles of size and edge of GN in the process. We discover the permeation of small GN into bilayer center through insertion and rotation driven by transbilayer lateral pressure. For large GNs, the translocation undergoes a vesiculation process driven by complicated energetic contributions. Circular GNs with smooth edge show faster translocation but similar mechanisms with square GNs. Our results are fundamentally essential for optimized design of GNs towards extensively biological and biomedical applications.

Entropy-mediated mechanical response of the interfacial nanoparticle patterning.

The precise organization of nano-objects into well-defined patterns at interfaces is an outstanding challenge in the field of nanocomposites toward technologically important materials and devices. Herein, by means of computer simulations we show novel mechanomutable nanocomposites designed by binary mixtures of tethered Janus nanoparticles at the interface of a binary fluid mixture under mechanical pressure. Our simulations demonstrate that the nanoparticle organization in the systems undergo reversible transition between random state and long-ranged intercalation state, controlled by various structural parameters of the tethered chains and the applied pressure. The dynamical mechanism during the transition is explored through examining the diffusion trajectories of the nanoparticles confined at the interfaces. We provide a theoretical analysis of the lateral pressure induced by the tethered chains, which is fully supported by simulation data and reveals that the compression-induced transition is fundamentally attributed to the entropic effect from the tethered chains. Our study leads to a class of interface-reactive nanomaterials in which the transfer and recovery of interfacial nanopatterning presents precise and tunable mechanical responses.

A Filled-Honeycomb-Structured Crystal Formed by Self-Assembly of a Janus Polyoxometalate–Silsesquioxane (POM–POSS) Co-Cluster

Clusters with diverse structures and functions have been used to create novel cluster-assembled materials (CAMs). Understanding their self-assembly process is a prerequisite to optimize their structure and function. Herein, two kinds of unlike organo-functionalized inorganic clusters are covalently linked by a short organic tether to form a dumbbell-shaped Janus co-cluster. In a mixed solvent of acetonitrile and water, it self-assembles into a crystal with a honeycomb superstructure constructed by hexagonal close-packed cylinders of the smaller cluster and an orderly arranged framework of the larger cluster. Reconstruction of these structural features via coarse-grained molecular simulations demonstrates that the cluster crystallization and the nanoscale phase separation between the two incompatible clusters synergistically result in the unique nano-architecture. Overall, this work opens up new opportunities for generating novel CAMs for advanced future applications.

Unique dynamical approach of fully wrapping dendrimer-like soft nanoparticles by lipid bilayer membrane.

Wrapping dendrimer-like soft nanoparticles by cell membrane is an essential event in their endocytosis in drug and gene delivery, but this process remains poorly elucidated. Using computer simulations and theoretical analysis, we report the detailed dynamics of the process in which a lipid bilayer membrane fully wraps a dendrimer-like soft nanoparticle. By constructing a phase diagram, we firstly demonstrate that there exist three states in the interaction between a dendrimer and a lipid bilayer membrane, i.e., penetration, penetration and partial wrapping, and full wrapping states. The wrapping process of dendrimer-like nanoparticles is found to take a unique approach where the penetration of the dendrimer into the membrane plays a significant role. The analysis of various energies within the system provides a theoretical justification to the state transition observed from simulations. The findings also support recent experimental results and provide a theoretical explanation for them. We expect that these findings are of immediate interest to the study of the cellular uptake of dendrimer-like soft nanoparticles and can prompt the further application of this class of nanoparticles in nanomedicine.

Predictive supracolloidal helices from patchy particles

A priori prediction of supracolloidal architectures from nanoparticle and colloidal assembly is a challenging goal in materials chemistry and physics. Despite intense research in this area, much less has been known about the predictive science of supracolloidal helices from designed building blocks. Therefore, developing conceptually new rules to construct supracolloidal architectures with predictive helicity is becoming an important and urgent task of great scientific interest. Here, inspired by biological helices, we show that the rational design of patchy arrangement and interaction can drive patchy particles to self-assemble into biomolecular mimetic supracolloidal helices. We further derive a facile design rule for encoding the target supracolloidal helices, thus opening the doors to the predictive science of these supracolloidal architectures. It is also found that kinetics and reaction pathway during the formation of supracolloidal helices offer a unique way to study supramolecular polymerization, and that well-controlled supracolloidal helices can exhibit tailorable circular dichroism effects at visible wavelengths.

Receptor-Mediated Endocytosis of Two-Dimensional Nanomaterials Undergoes Flat Vesiculation and Occurs by Revolution and Self-Rotation.

Two-dimensional nanomaterials, such as graphene and transitional metal dichalcogenide nanosheets, are promising materials for the development of antimicrobial surfaces and the nanocarriers for intracellular therapy. Understanding cell interaction with these emerging materials is an urgently important issue to promoting their wide applications. Experimental studies suggest that two-dimensional nanomaterials enter cells mainly through receptor-mediated endocytosis. However, the detailed molecular mechanisms and kinetic pathways of such processes remain unknown. Here, we combine computer simulations and theoretical derivation of the energy within the system to show that the receptor-mediated transport of two-dimensional nanomaterials, such as graphene nanosheet across model lipid membrane, experiences a flat vesiculation event governed by the receptor density and membrane tension. The graphene nanosheet is found to undergo revolution relative to the membrane and, particularly, unique self-rotation around its normal during membrane wrapping. We derive explicit expressions for the formation of the flat vesiculation, which reveals that the flat vesiculation event can be fundamentally dominated by a dimensionless parameter and a defined relationship determined by complicated energy contributions. The mechanism offers an essential understanding on the cellular internalization and cytotoxicity of the emerging two-dimensional nanomaterials.

Influence of Counterion Valency on the Conformational Behavior of Cylindrical Polyelectrolyte Brushes

Using a dissipative particle dynamics approach, we study the conformations and interactions of a cylindrical polyelectrolyte brush (CPB) with added salt. The effects of counterion valency on the conformational behaviors of the CPB are analyzed in detail by considering various parameters like the distribution of bond lengths, the mean distance between two grafting points, the order parameter of side chains, etc. The lyotropic behavior of the CPB is also investigated through examining the backbone persistence. Our simulations demonstrate that the presence of the multivalent counterions can induce the collapse of the CPB, leading to various conformations. We identify a horseshoe to helical to coil-like conformation transition with increasing counterion valency. An important factor for the collapse of the CPB is the fact that the strong condensation of counterions induced by the higher electrostatic correlations decreases the osmotic pressure inside the brush. It is found that the ratio of the backbone persistence to the diameter of the CPB, l(p)/d, can only be affected to a slight extent by changing the counterion valency and the side chain length. These results may provide a valuable guideline that can be used to tailor the microstructure of the systems and to yield desired macroscopic behaviors.

Construction of a linker library with widely controllable flexibility for fusion protein design

Flexibility or rigidity of the linker between two fused proteins is an important parameter that affects the function of fusion proteins. In this study, we constructed a linker library with five elementary units based on the combination of the flexible (GGGGS) and the rigid (EAAAK) units. Molecular dynamics (MD) simulation showed that more rigid units in the linkers lead to more helical conformation and hydrogen bonds, and less distance fluctuation between the N- and C-termini of the linker. The diversity of linker flexibility of the linker library was then studied by fluorescence resonance energy transfer (FRET) of cyan fluorescent protein (CFP)-yellow fluorescent protein (YFP) fusion proteins, which showed that there is a wide range of distribution of the FRET efficiency. Dissipative particle dynamics (DPD) simulation of CFP-YFP with different linkers also gave identical results with that of FRET efficiency analysis, and we further found that the combination manner of the linker peptide had a remarkable effect on the orientation of CFP and YFP domains. Our studies demonstrated that the construction of the linker library with the widely controllable flexibility could provide appropriate linkers with the desirable characteristics to engineer the fusion proteins with the expected functions.