Luis Manuel Enríquez-Paredes

Post-Glacial Expansion and Population Genetic Divergence of Mangrove Species Avicennia germinans (L.) Stearn and Rhizophora mangle L. along the Mexican Coast

Mangrove forests in the Gulf of California, Mexico represent the northernmost populations along the Pacific coast and thus they are likely to be source populations for colonization at higher latitudes as climate becomes more favorable. Today, these populations are relatively small and fragmented and prior research has indicated that they are poor in genetic diversity. Here we set out to investigate whether the low diversity in this region was a result of recent colonization, or fragmentation and genetic drift of once more extensive mangroves due to climatic changes in the recent past. By sampling the two major mangrove species, Rhizophora mangle and Avicennia germinans, along the Pacific and Atlantic coasts of Mexico, we set out to test whether concordant genetic signals could elucidate recent evolution of the ecosystem. Genetic diversity of both mangrove species showed a decreasing trend toward northern latitudes along the Pacific coast. The lowest levels of genetic diversity were found at the range limits around the Gulf of California and the outer Baja California peninsula. Lack of a strong spatial genetic structure in this area and recent northern gene flow in A. germinans suggest recent colonization by this species. On the other hand, lack of a signal of recent northern dispersal in R. mangle, despite the higher dispersal capability of this species, indicates a longer presence of populations, at least in the southern Gulf of California. We suggest that the longer history, together with higher genetic diversity of R. mangle at the range limits, likely provides a gene pool better able to colonize northwards under climate change than A. germinans.

Population structure of purple sea urchin Strongylocentrotus purpuratus along the Baja California peninsula

Purple sea urchin Strongylocentrotus purpuratus is fished from British Columbia, Canada to Punta Baja, Mexico. The North American population has been divided into northern and southern fishery stocks at the break of Point Conception, but little is known about its southernmost distribution along the Mexican Pacific coast of the Baja California peninsula. In this study purple sea urchin populations in six sites along the Baja California peninsula were analyzed using mitochondrial deoxyribonucleic acid restriction fragment length polymorphism (mtDNA RFLP). A homogeneous distribution of three common haplotypes among all sites was observed. A significant FST value, however, indicated genetic structure mainly due to the haplotype array in San Miguel, Isla Todos Santos and Punta Baja sites, which were characterized by having high haplotype diversity and several unique haplotypes. Homogeneous distribution of haplotypes along the peninsula could have been influenced by the unidirectional California Current system, flowing north to south. Unique haplotypes in Punta Baja and the structure found could be the result of local oceanographic features specific to this major upwelling zone. It may be necessary to consider the Punta Baja populations individually when managing the purple sea urchin fishery in Baja California, as they show signs of being a unique stock.

Fine-Scale Population Structure of Blue Whale Wintering Aggregations in the Gulf of California

Population differentiation in environments without well-defined geographical barriers represents a challenge for wildlife management. Based on a comprehensive database of individual sighting records (1988–2009) of blue whales from the winter/calving Gulf of California, we assessed the fine-scale genetic and spatial structure of the population using individual-based approaches. Skin samples of 187 individuals were analyzed for nine microsatellite loci. A single population with no divergence among years and months and no isolation by distance (Rxy = 0.1–0.001, p>0.05) were found. We ran two Bayesian clustering methods using Structure and Geneland softwares in two different ways: 1) a general analysis including all individuals in which a single cluster was identified with both softwares; 2) a specific analysis of females only in which two main clusters (Loreto Bay and northern areas, and San Jose-La Paz Bay area) were revealed by Geneland program. This study provides information indicating that blue whales wintering in the Gulf of California are part of a single population unit and showed a fine-scale structure among females, possibly associated with their high site fidelity, particularly when attending calves. It is likely that the loss of genetic variation is minimized by male mediated gene flow, which may reduce the genetic drift effect. Opportunities for kin selection may also influence calf survival and, in consequence, have a positive impact on population demography in this small and endangered population.

Genetic analysis of the endemic fungal pathogens Coccidioides posadasii and Coccidioides immitis in Mexico

Coccidioidomycosis (CM) is a mycotic disease that affects mammals, including humans. Official data relative to CM in Mexico has not been collected since 1995, thus its prevalence remains unknown. The objectives of this study were to identify the predominant Coccidioides species in Mexico, infer their current geographical distribution and explore the correlation between species and clinical presentation. We collected 154 strains, which were cultured, inactivated, and processed for DNA extraction. Nine microsatellite loci, the Ag2/PRA gene and Umeyama Region were amplified from each isolate. To infer the current geographical distribution of Coccidioides spp. and to establish a correlation between genotype and clinical presentation, we evaluated genetic population structure under the following grouping criteria: putative origin and clinical presentation records. Microsatellite analysis showed that 82% of the isolates corresponded to C. posadasii and 18% were C. immitis. The species identification results obtained using Umeyama region, Ag2/PRA, and microsatellites of five of the isolates were inconsistent with the data collected for the remaining isolates. C. posadasii strains were found primarily in the northeastern region and C. immitis in the northwestern region. However, there was no relationship between clinical presentation and Coccidioides species. The molecular markers used in this study proved to have a high power of resolution to identify the Coccidioides species recovered in culture. While we found C. posadasii to be the most abundant species in Mexico, more detailed clinical records are needed in order to obtain more accurate information about the infections in specific geographical locations.

Lack of genetic evidence for the subspeciation of Pisaster ochraceus (Echinodermata: Asteroidea) in the north-eastern Pacific Ocean

The existence of two Pisaster ochraceus subspecies has been proposed; one located northwards ( P. ochraceus ochraceus) and the other southwards (Pisaster ochraceus segnis ) from Point Conception. We used polymerase chain reaction–restriction fragment length polymorphism of the CO I and CO III mitochondrial genes to assess the degree of population structure from 126 samples collected along the western coast of North America, from Vancouver, Canada to Punta San Carlos, of Baja California, Mexico. The genetic structure was tested through molecular analysis of variance and by Monte Carlo simulations of the original data set. The phylogeographical pattern was deduced from a minimum spanning network analysis. No genetic structure was detected. Instead, a high degree of genetic homogeneity along the species distribution was evident from haplotype frequencies at each location. Two haplotypes, Po1 and Po5 , were predominant along the distribution and were considered ancestral because of their central position in the minimum spanning network. Since Pisaster ochraceus depicts a planktotrophic larval stage with very long duration before settlement, it seems to be able to surpass the biogeographical boundary that limits other species around Point Conception, thereby maintaining homogeneity of its genetic pool. Results of this study recognize P. ochraceus as a single species.