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Genome Medicine | 2011

Towards a Data Sharing Code of Conduct for International Genomic Research

Bartha Maria Knoppers; Jennifer R. Harris; Anne Marie Tassé; Isabelle Budin-Ljøsne; Jane Kaye; Mylène Deschênes; Ma'n H. Zawati

Data sharing is increasingly regarded as an ethical and scientific imperative that advances knowledge and thereby respects the contributions of the participants. Because of this and the ever-increasing amount of data access requests currently filed around the world, three groups have decided to develop data sharing principles specific to the context of collaborative international genomics research. These groups are: the international Public Population Project in Genomics (P3G), an international consortium of projects partaking in large-scale genetic epidemiological studies and biobanks; the European Network for Genetic and Genomic Epidemiology (ENGAGE), a research project aiming to translate data from large-scale epidemiological research initiatives into relevant clinical information; and the Centre for Health, Law and Emerging Technologies (HeLEX). We propose seven different principles and a preliminary international data sharing Code of Conduct for ongoing discussion.


Journal of Medical Genetics | 2015

The clinical application of genome-wide sequencing for monogenic diseases in Canada: Position Statement of the Canadian College of Medical Geneticists

Kym M. Boycott; Taila Hartley; Shelin Adam; Francois P. Bernier; Karen Chong; Bridget A. Fernandez; Jan M. Friedman; Michael T. Geraghty; Stacey Hume; Bartha Maria Knoppers; Anne-Marie Laberge; Jacek Majewski; Roberto Mendoza-Londono; M. Stephen Meyn; Jacques L. Michaud; Tanya N. Nelson; Julie Richer; Bekim Sadikovic; David L. Skidmore; Tracy L. Stockley; Sherry Taylor; Clara van Karnebeek; Ma'n H. Zawati; Julie Lauzon; Christine M. Armour

Purpose and scope The aim of this Position Statement is to provide recommendations for Canadian medical geneticists, clinical laboratory geneticists, genetic counsellors and other physicians regarding the use of genome-wide sequencing of germline DNA in the context of clinical genetic diagnosis. This statement has been developed to facilitate the clinical translation and development of best practices for clinical genome-wide sequencing for genetic diagnosis of monogenic diseases in Canada; it does not address the clinical application of this technology in other fields such as molecular investigation of cancer or for population screening of healthy individuals. Methods of statement development Two multidisciplinary groups consisting of medical geneticists, clinical laboratory geneticists, genetic counsellors, ethicists, lawyers and genetic researchers were assembled to review existing literature and guidelines on genome-wide sequencing for clinical genetic diagnosis in the context of monogenic diseases, and to make recommendations relevant to the Canadian context. The statement was circulated for comment to the Canadian College of Medical Geneticists (CCMG) membership-at-large and, following incorporation of feedback, approved by the CCMG Board of Directors. The CCMG is a Canadian organisation responsible for certifying medical geneticists and clinical laboratory geneticists, and for establishing professional and ethical standards for clinical genetics services in Canada. Results and conclusions Recommendations include (1) clinical genome-wide sequencing is an appropriate approach in the diagnostic assessment of a patient for whom there is suspicion of a significant monogenic disease that is associated with a high degree of genetic heterogeneity, or where specific genetic tests have failed to provide a diagnosis; (2) until the benefits of reporting incidental findings are established, we do not endorse the intentional clinical analysis of disease-associated genes other than those linked to the primary indication; and (3) clinicians should provide genetic counselling and obtain informed consent prior to undertaking clinical genome-wide sequencing. Counselling should include discussion of the limitations of testing, likelihood and implications of diagnosis and incidental findings, and the potential need for further analysis to facilitate clinical interpretation, including studies performed in a research setting. These recommendations will be routinely re-evaluated as knowledge of diagnostic and clinical utility of clinical genome-wide sequencing improves. While the document was developed to direct practice in Canada, the applicability of the statement is broader and will be of interest to clinicians and health jurisdictions internationally.


Nature Reviews Genetics | 2015

Return of genetic testing results in the era of whole-genome sequencing

Bartha Maria Knoppers; Ma'n H. Zawati; Karine Sénécal

Genetic testing based on whole-genome sequencing (WGS) often returns results that are not directly clinically actionable as well as raising the possibility of incidental (secondary) findings. In this article, we first survey the laws and policies guiding both researchers and clinicians in the return of results for WGS-based genetic testing. We then provide an overview of the landscape of international legislation and policies for return of these results, including considerations for return of incidental findings. Finally, we consider a range of approaches for the return of results.


Nature Genetics | 2011

The role of a bioresource research impact factor as an incentive to share human bioresources

Anne Cambon-Thomsen; Gudmundur A. Thorisson; Laurence Mabile; Sandrine Andrieu; Gabrielle Bertier; Martin Boeckhout; Jane Carpenter; Georges Dagher; Raymond Dalgleish; Mylène Deschênes; Jeanne Hélène Di Donato; Mirella Filocamo; Marcel Goldberg; Robert Hewitt; Paul Hofman; Francine Kauffmann; Liis Leitsalu; Irene Lomba; Béla Melegh; Andres Metspalu; Lisa B. Miranda; Federica Napolitani; Mikkel Z. Oestergaard; Barbara Parodi; Markus Pasterk; Acacia Reiche; Emmanuelle Rial-Sebbag; Guillaume Rivalle; Philippe Rochaix; Guillaume Susbielle

The role of a bioresource research impact factor as an incentive to share human bioresources


Journal of Leukocyte Biology | 2014

A review of the key issues associated with the commercialization of biobanks

Timothy Caulfield; Sarah Burningham; Yann Joly; Zubin Master; Mahsa Shabani; Pascal Borry; Allan B. Becker; Michael M. Burgess; Kathryn Calder; Christine Critchley; Kelly Edwards; Stephanie M. Fullerton; Herbert Gottweis; Robyn Hyde-Lay; Judy Illes; Rosario Isasi; Kazuto Kato; Jane Kaye; Bartha Maria Knoppers; John Lynch; Amy L. McGuire; Eric M. Meslin; D Nicol; Kieran O'Doherty; Ubaka Ogbogu; Margaret Otlowski; Daryl Pullman; Nola M. Ries; Christopher Thomas Scott; Malcolm R. Sears

A review of the key issues associated with the commercialization of biobanks Timothy Caulfield∗, Sarah Burningham, Yann Joly, ZubinMaster, Mahsa Shabani, Pascal Borry, Allan Becker, Michael Burgess, Kathryn Calder, Christine Critchley, Kelly Edwards, Stephanie M. Fullerton, Herbert Gottweis, Robyn Hyde-Lay, Judy Illes, Rosario Isasi, Kazuto Kato, Jane Kaye, Bartha Knoppers, John Lynch, AmyMcGuire, Eric Meslin, Dianne Nicol, Kieran O’Doherty, Ubaka Ogbogu, Margaret Otlowski, Daryl Pullman, Nola Ries, Chris Scott, Malcolm Sears, HelenWallace andMa’n H. Zawati†


Journal of Leukocyte Biology | 2014

Towards an Ethics Safe Harbor for Global Biomedical Research

Edward S. Dove; Bartha Maria Knoppers; Ma'n H. Zawati

Although increasingly global, data-driven genomics and other ‘omics’-focused research hold great promise for health discoveries, current research ethics review systems around the world challenge potential improvements in human health from such research. To overcome this challenge, we propose a ‘Safe Harbor Framework for International Ethics Equivalency’ that facilitates the harmonization of ethics review of specific types of data-driven international research projects while respecting globally transposable research ethics norms and principles. The Safe Harbor would consist in part of an agency supporting an International Federation for Ethics Review (IFER), formed by a voluntary compact among countries, granting agencies, philanthropies, institutions, and healthcare, patient advocacy, and research organizations. IFER would be both a central ethics review body, and also a forum for review and follow-up of policies concerning ethics norms for international research projects. It would be built on five principle elements: (1) registration, (2) compliance review, (3) recognition, (4) monitoring and enforcement, and (5) public participation. The Safe Harbor would create many benefits for researchers, countries, and the general public, and may eventually have application beyond (gen)omics to other areas of biomedical research that increasingly engage in secondary use of data and present only negligible risks.


Clinical Genetics | 2013

Funding considerations for the disclosure of genetic incidental findings in biobank research

Lee Black; Denise Avard; Ma'n H. Zawati; Bartha Maria Knoppers; Josée Hébert; Guy Sauvageau

The use of biobanks in biomedical research has grown considerably in recent years. As a result of the increasing analysis of tissue samples stored in biobanks, there has also been an increase in the probability of discovering—in addition to the research target—incidental findings (IF). We identified 23 laws, policies and guidelines from international, regional and national organizations that provide guidance or identify the need for the disclosure of IF to research participants. We analyzed these instruments to determine their contemplation of the funding considerations for the disclosure of IF, examining their guidance for who discloses and the extent of researcher responsibilities. We found that the available normative documents provide little guidance to researchers and biobanks for how they should address cost and funding concerns associated with IF disclosure. It is therefore essential that the research and policy communities think through the financial implications of imposing an ethical responsibility to disclose IF. Concerted efforts should be made by policymakers, ethicists, researchers, clinicians and research institutions to develop detailed funding recommendations, potentially universal in application, to aid in the disclosure of IF, and we provide recommendations on steps that can be taken to ensure full consideration of these issues.


Omics A Journal of Integrative Biology | 2011

Vaccines of the 21st Century and Vaccinomics: Data-Enabled Science Meets Global Health to Spark Collective Action for Vaccine Innovation

Vural Ozdemir; Tikki Pang; Bartha Maria Knoppers; Denise Avard; Samer Faraj; Ma'n H. Zawati; Eugene Kolker

This article talks about vaccinomics, which is the integrated use of data enabled multiomics approaches to understand themechanisms responsible for heterogeneity in humoral, cell-mediated, and innate immune responses to vaccines at both the individual and population level. The authors comment on the parallel rise of vaccinomics and global health, and various other topics, including vaccinomics infrastructure science and public health ethics, and public engagement in vaccinomics.


Journal of Law Medicine & Ethics | 2015

International Guidelines for Privacy in Genomic Biobanking (or the Unexpected Virtue of Pluralism)

Adrian Thorogood; Ma'n H. Zawati

This article reviews international privacy norms governing human genomic biobanks and databases, and how they address issues related to consent, secondary use, de- identification, access, security, and governance. A range of international instruments were identified, varying in substance - e.g., human rights, data protection, research ethics, biobanks, and genetics - and legal character. Some norms detail processes for broad consent, namely, that even where potential participants cannot consent to specific users and uses, they should be given clear information on access policies, procedures, and governance structures. Some also give guidance about the conditions under which secondary use of data and samples without consent is appropriate, e.g., where consent is impracticable. International norms exhibit a confusing range of terminology relating to de-identification. They also continue to rely heavily on consent and anonymity as the basis for privacy protection, though governance is becoming more prominent. It may not be fatal that such a plurality of norms apply to biobanking; what is essential is that governance be built on shared values, our common interest in the success of genomic research, and practical tools that incentivize responsible, global sharing.


Journal of Medical Genetics | 2015

Streamlining review of research involving humans: Canadian models

Ma'n H. Zawati; Anne K. Junker; Bartha Maria Knoppers; Vasiliki Rahimzadeh

Biomedical research post sequencing of the first human genome is increasingly eroding a traditional ecology of individualist science. It is, furthermore, normalising collective innovation and shared scientific discovery.1 ,2 Achieving sound statistical power in a genome-wide association study, for example, can often be well beyond the scope of any one researchers capacity. For this reason and others, the scientific imperative of research collaboration can be more pronounced in the ‘omics’ disciplines,3 where millions of data points are needed to make global inferences about links between the human genome and disease.4 From the scientific necessity to adequately power a study through research collaborations is also born an ethical imperative to do so. That is, the anticipated benefits and harms of a particular study are justified based on the researchers’ sound predictions about potential outcomes and contributions to knowledge. Either underestimating or overestimating translational possibilities can disturb the benefit–harm balance due largely to insufficient statistical power.5 Two important milestones, therefore, rest on this bench-to-bedside continuum for ‘omics’ research, and are essential for any clinical translation endeavour: research ethics and data-access reviews. The former ensures appropriate ongoing ethical oversight and participant protections, while the latter enables research collaboration by providing researchers with access to data. Debates surrounding traditional issues facing such reviews are ubiquitous in the literature, yet little attention has been paid to how these issues are exacerbated when studies span across multiple jurisdictions. This is particularly true for research typified in the ‘omics’ disciplines, where international collaboration is the norm rather than the exception. Here, a distinction between multi-site and multi-jurisdictional research should be emphasised. While multi-site research implies that the project takes place across many individual sites, multi-jurisdictional research involves sites in different legal jurisdictions. Multi-jurisdictional research along with the ethics review processes required to …

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Anne K. Junker

University of British Columbia

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