Maheshwar Dhakal

Noninvasive genetic population survey of snow leopards (Panthera uncia) in Kangchenjunga conservation area, Shey Phoksundo National Park and surrounding buffer zones of Nepal

BackgroundThe endangered snow leopard is found throughout major mountain ranges of Central Asia, including the remote Himalayas. However, because of their elusive behavior, sparse distribution, and poor access to their habitat, there is a lack of reliable information on their population status and demography, particularly in Nepal. Therefore, we utilized noninvasive genetic techniques to conduct a preliminary snow leopard survey in two protected areas of Nepal.ResultsA total of 71 putative snow leopard scats were collected and analyzed from two different areas; Shey Phoksundo National Park (SPNP) in the west and Kangchanjunga Conservation Area (KCA) in the east. Nineteen (27%) scats were genetically identified as snow leopards, and 10 (53%) of these were successfully genotyped at 6 microsatellite loci. Two samples showed identical genotype profiles indicating a total of 9 individual snow leopards. Four individual snow leopards were identified in SPNP (1 male and 3 females) and five (2 males and 3 females) in KCA.ConclusionsWe were able to confirm the occurrence of snow leopards in both study areas and determine the minimum number present. This information can be used to design more in-depth population surveys that will enable estimation of snow leopard population abundance at these sites.

Population status, structure and distribution of the greater one-horned rhinoceros Rhinoceros unicornis in Nepal

We assessed the abundance and distribution of the greater one-horned or Indian rhinoceros Rhinoceros unicornis in all its potential habitats in Nepal, using block counts. In April 2011 5,497 km were searched in 3,548 elephant-hours over 23 days. The validity of the block count was assessed by comparing it with counts obtained from long-term monitoring using photographic identification of individual rhinoceroses (ID-based), and estimates obtained by closed population sighting–mark–resighting in the 214 km 2 of Chitwan National Park. A total of 534 rhinoceroses were found during the census, with 503 in Chitwan National Park (density 1 km −2 ), 24 in Bardia National Park (0.28 km −2 ) and seven in Suklaphanta Wildlife Reserve (0.1 km −2 ). In Chitwan 66% were adults, 12% subadults and 22% calves, with a female : male ratio of 1.24. The population estimate from sighting–mark–resighting was 72 (95% CI 71–78). The model with different detection probabilities for males and females had better support than the null model. In the Sauraha area of Chitwan estimates of the population obtained by block count (77) and ID-based monitoring (72) were within the 95% confidence interval of the estimate from sighting–mark–resighting. We recommend a country-wide block count for rhinoceroses every 3 years and annual ID-based monitoring in a sighting–mark–resighting framework within selected subpopulations. The sighting–mark–resighting technique provides the statistical rigour required for population estimates of the rhinoceros in Nepal and elsewhere.

Nature and extent of human–elephant Elephas maximus conflict in central Nepal

Human-elephant conflict is one of the main threats to the long-term survival of the Asian elephant Elephas maximus. We studied the nature and extent of human-elephant interactions in the buffer zones of Chitwan National Park and Parsa Wildlife Reserve in Nepal, through household questionnaire surveys, key informant interviews, site observations, and analysis of the reported cases of damage during January 2008-December 2012. During this 5-year period 290 incidents of damage by elephants were reported, with a high concentration of incidents in a few locations. Property damage (53%) was the most common type of damage reported. Crop damage was reported less often but household surveys revealed it to be the most frequent form of conflict. There were also human casualties, including 21 deaths and four serious injuries. More than 90% of the human casualties occurred during 2010-2012. More than two thirds of the respondents (70%) perceived that human-elephant conflict had increased substantially during the previous 5 years. Despite the increase in incidents of human-elephant conflict in the area, 37% of respondents had positive attitudes towards elephant conservation. Our findings suggest that public awareness and compensation for losses could reduce conflict and contribute to ensuring coexistence of people and elephants in this human-dominated landscape.

Leopard Panthera pardus fusca Density in the Seasonally Dry, Subtropical Forest in the Bhabhar of Terai Arc, Nepal

We estimated leopard (Panthera pardus fusca) abundance and density in the Bhabhar physiographic region in Parsa Wildlife Reserve, Nepal. The camera trap grid, covering sampling area of 289 km2 with 88 locations, accumulated 1,342 trap nights in 64 days in the winter season of 2008-2009 and photographed 19 individual leopards. Using models incorporating heterogeneity, we estimated 28 (±SE 6.07) and 29.58 (±SE 10.44) leopards in Programs CAPTURE and MARK. Density estimates via 1/2 MMDM methods were 5.61 (±SE 1.30) and 5.93 (±SE 2.15) leopards per 100 km2 using abundance estimates from CAPTURE and MARK, respectively. Spatially explicit capture recapture (SECR) models resulted in lower density estimates, 3.78 (±SE 0.85) and 3.48 (±SE 0.83) leopards per 100 km2, in likelihood based program DENSITY and Bayesian based program SPACECAP, respectively. The 1/2 MMDM methods have been known to provide much higher density estimates than SECR modelling techniques. However, our SECR models resulted in high leopard density comparable to areas considered better habitat in Nepal indicating a potentially dense population compared to other sites. We provide the first density estimates for leopards in the Bhabhar and a baseline for long term population monitoring of leopards in Parsa Wildlife Reserve and across the Terai Arc.

Global lessons from successful rhinoceros conservation in Nepal

Global populations of rhinoceros have declined alarmingly, from about 500,000 at the beginning of the 20th century to 29,000 in 2016, largely due to an escalation of poaching for rhinoceros horn (Traffic 2016; Biggs et al. 2013). The current global rhino population is comprised of three Asian Species and two African species, the latter located in South Africa, Kenya, Tanzania, Namibia and Zimbabwe,. In Africa, the Southern white rhinoceros population is estimated at 20,700; and there are estimated to be around 4,885 black rhinoceros. The greater one-horned rhinoceros, found in Nepal and India, has a population of approximately 3,555. The other Asian rhino species are confined to Indonesia and have much lower numbers; there are fewer than 100 Sumatran rhinos and only 58–61 Javan rhinos. The number of African rhino killed by poachers in the last ten years is estimated at 5,957 (Traffic 2016; Emslie et al. 2013; Poaching fact2016), about 1,338 of these were taken in 2015, a year in which the highest number of rhino were taken since the late 1980s (Traffic 2016; Gaworecki 2016; Figure 1). At current poaching rates, Africa’s rhino populations may be extinct within 20 years (Di Minin et al. 2015). The Sumatran and Javan rhino populations continue to decline due to habitat destruction, poaching and inbreeding (Save the Rhino, 2016b) pushing them to the verge of extinction.

Ancient Himalayan wolf (Canis lupus chanco) lineage in Upper Mustang of the Annapurna Conservation Area, Nepal

Abstract The taxonomic status of the wolf (Canis lupus) in Nepal’s Trans-Himalaya is poorly understood. Recent genetic studies have revealed the existence of three lineages of wolves in the Indian sub-continent. Of these, the Himalayan wolf, Canis lupus chanco, has been reported to be the most ancient lineage historically distributed within the Nepal Himalaya. These wolves residing in the Trans-Himalayan region have been suggested to be smaller and very different from the European wolf. During October 2011, six fecal samples suspected to have originated from wolves were collected from Upper Mustang in the Annapurna Conservation Area of Nepal. DNA extraction and amplification of the mitochondrial (mt) control region (CR) locus yielded sequences from five out of six samples. One sample matched domestic dog sequences in GenBank, while the remaining four samples were aligned within the monophyletic and ancient Himalayan wolf clade. These four sequences which matched each other, were new and represented a novel Himalayan wolf haplotype. This result confirms that the endangered ancient Himalayan wolf is extant in Nepal. Detailed genomic study covering Nepal’s entire Himalayan landscape is recommended in order to understand their distribution, taxonomy and, genetic relatedness with other wolves potentially sharing the same landscape.

Rapid recovery of tigers Panthera tigris in Parsa Wildlife Reserve, Nepal

Information on density and abundance of globally threatened species such as tigers Panthera tigris is essential for effective conservation as well as to evaluate the success of conservation programmes. We monitored tigers in Parsa Widlife Reserve, Nepal, using camera traps, in 2013, 2014 and 2016. Once believed to be a sink for tigers from adjacent Chitwan National Park, Parsa now provides a new hope for tigers. Spatially explicit capture–recapture analysis over 3 survey years revealed an increase in tiger density from 0.78 to 1.38 individuals per 100 km2 from 2013 to 2016. The tiger abundance was estimated to be seven (6–13), 11 (10–16) and 17 (17–20) in 2013, 2014 and 2016, respectively. Resettlement of communities from the core area, reduced anthropogenic pressure, and improved security have made Parsa Wildlife Reserve a suitable habitat for tigers. Tiger abundance increased considerably within a 5 km radius of the evacuated village sites, from two in 2013 to eight in 2014 and 10 in 2016. Population turnover has remained moderate (

Living with tigers Panthera tigris : patterns, correlates, and contexts of human–tiger conflict in Chitwan National Park, Nepal

Human–tiger conflict arises when tigers Panthera tigris attack people or their livestock, and poses a significant threat to both tigers and people. To gain a greater understanding of such conflict we examined spatio-temporal patterns, correlates, causes and contexts of conflict in Chitwan National Park, Nepal, and its buffer zone, during 2007–2014. Data, mostly from compensation applications, were collected from the Park office. Fifty-four human casualties (32 fatalities, 22 injuries) and 351 incidents of livestock depredation were recorded, clustered in defined areas, with 75.9% of human casualties occurring in the buffer zone and 66.7% within 1 km of the Park boundary. A linear model indicated there was a significant increase in human casualties during 2007–2014. Livestock were killed in proportion to their relative availability, with goats suffering the highest depredation (55%). There was a positive correlation between livestock depredation and National Park frontage (the length of Village Development Committee/municipality boundary abutting the National Park), but not human population, livestock population, forest area in the buffer zone, rainfall or temperature. There was no relationship between tiger attacks on people and any of the correlates examined. Wild prey density was not correlated with conflict. Of the tigers removed because of conflict, 73.3% were male. The majority of attacks on people occurred during accidental meetings (77.8%), mostly while people were collecting fodder or fuelwood (53.7%), and almost half (48.2%) occurred in the buffer zone forests. We recommend the use of the conflict map developed here in the prioritization of preventive measures, and that strategies to reduce conflict should include zoning enforcement, improvement of livestock husbandry, participatory tiger monitoring, an insurance scheme, and community awareness.

Surveillance of Influenza A Virus and Its Subtypes in Migratory Wild Birds of Nepal.

Nepal boarders India and China and all three countries lie within the Central Asian Flyway for migratory birds. Novel influenza A H7N9 caused human fatalities in China in 2013. Subclinical infections of influenza A H7N9 in birds and the potential for virus dispersal by migratory birds prompted this study to assess avian H7N9 viral intrusion into Nepal. Surveillance of influenza A virus in migratory birds was implemented in early 2014 with assistance from the Food and Agricultural Organization (FAO). Of 1811 environmental fecal samples collected from seven wetland migratory bird roosting areas, influenza A H9N2 was found in one sample from a ruddy shelduck in Koshi Tappu Wildlife Reserve located in southern Nepal. Avian H7N9 and other highly pathogenic avian influenza viruses were not detected. This study provides baseline data on the status of avian influenza virus in migratory bird populations in Nepal.

Assessment of genetic diversity, population structure, and gene flow of tigers (Panthera tigris tigris) across Nepal's Terai Arc Landscape

With fewer than 200 tigers (Panthera tigris tigris) left in Nepal, that are generally confined to five protected areas across the Terai Arc Landscape, genetic studies are needed to provide crucial information on diversity and connectivity for devising an effective country-wide tiger conservation strategy. As part of the Nepal Tiger Genome Project, we studied landscape change, genetic variation, population structure, and gene flow of tigers across the Terai Arc Landscape by conducting Nepal’s first comprehensive and systematic scat-based, non-invasive genetic survey. Of the 770 scat samples collected opportunistically from five protected areas and six presumed corridors, 412 were tiger (57%). Out of ten microsatellite loci, we retain eight markers that were used in identifying 78 individual tigers. We used this dataset to examine population structure, genetic variation, contemporary gene flow, and potential population bottlenecks of tigers in Nepal. We detected three genetic clusters consistent with three demographic sub-populations and found moderate levels of genetic variation (He = 0.61, AR = 3.51) and genetic differentiation (FST = 0.14) across the landscape. We detected 3–7 migrants, confirming the potential for dispersal-mediated gene flow across the landscape. We found evidence of a bottleneck signature likely caused by large-scale land-use change documented in the last two centuries in the Terai forest. Securing tiger habitat including functional forest corridors is essential to enhance gene flow across the landscape and ensure long-term tiger survival. This requires cooperation among multiple stakeholders and careful conservation planning to prevent detrimental effects of anthropogenic activities on tigers.