Manfred Ruppel

Indole glucosinolate and auxin biosynthesis in Arabidopsis thaliana (L.) Heynh. glucosinolate mutants and the development of clubroot disease.

Abstract. Mutants and wild type plants of Arabidopsis thaliana were analysed for differences in glucosinolate accumulation patterns, indole-3-acetic acid (IAA) biosynthesis and phenotype. A previously identified series of mutants, termed TU, with altered glucosinolate patterns was used in this study. Only the line TU8 was affected in shoot phenotype (shorter stems, altered branching pattern). Synthesis of IAA and metabolism were not much affected in the TU8 mutant during seedling development, although the content of free IAA peaked earlier in TU8 during plant development than in the wild type. Indole glucosinolates and IAA may, however, be involved in the development of clubroot disease caused by the obligate biotrophic fungus Plasmodiophora brassicae since the TU3 line had a lower infection rate than the wild type, and lines TU3 and TU8 showed decreased symptom development. The decline in clubroot formation was accompanied by a reduced number of fungal structures within the root cortex and slower development of the fungus. Indole glucosinolates were lower in infected roots of TU3 and TU8 than in control roots of these lines, whereas in wild-type plants the differences were not as prominent. Free IAA and indole-3-acetonitrile (IAN) were increased in infected roots of the wild type and mutants with normal clubroot symptoms, whereas they were reduced in infected roots of mutants TU3 and TU8. These results indicate a role for indole glucosinolates and IAN/IAA in relation to symptom development in clubroot disease.

In vitro dentinal surface reaction of 9.5% buffered hydrofluoric acid in repair of ceramic restorations: A scanning electron microscopic investigation

STATEMENT OF PROBLEM Fracture of porcelain is a relatively common clinical misfortune. Recent research has indicated that strong bonds can be formed between composite and dental porcelain. Porcelain surfaces are etched with hydrofluoric acid and treated with silane coupling agents before composite application. The question is how exposed dentin may react to etching with hydrofluoric acid. PURPOSE This investigation examined the effect of 9.5% buffered hydrofluoric acid, of 36% o-phosphoric acid alone and in combination on the surface structure of cut human dentin. MATERIAL AND METHODS Human molar teeth were sectioned in approximately 0.8-mm thick slices and treated with different acids or their combinations. Application periods were 10, 60, and 180 seconds. Specimens were processed for SEM and for energy-dispersive x-ray (EDX) microanalysis. RESULTS The smear layer on the surface of sectioned dentin was not completely removed by hydrofluoric acid alone and that a dense amorphous precipitate was formed on the peritubular zone. Starlike structures in dentinal tubules were visible. EDX analysis revealed different fluoride content on the treated surface, dependent on the etchant used. CONCLUSION Topical application of hydrofluoric acid appeared to provide a dentinal surface with an amorphous precipitate of fluoride. This layer may be important both for resistance of dental caries in dentin and for bonding reactions.

Four new species of Nitzschia sect. Tryblionella (Bacillariophyceae) resembling N. parvula

Abstract In the course of research on the diatoms from surface sediments sampled in the marine littoral and sublittoral worldwide, and in some freshwater localities in central Europe, several problematic taxa were encountered resembling Nitzschia parvula. We therefore undertook a light and scanning electron microscopical study of five species of Nitzschia belonging to the section Tryblionella. After a period of misidentification, one of the taxa studied, N. parvula, is now known from the type preparation. The remaining taxa are either new to science or have previously lacked formal descriptions. The first of them is found in freshwater habitats and is described here as N. beyeri Lange-Bertalot, whereas the second, from the tropical marine littoral, is described as N. schweikertii Witkowski, Lange-Bertalot, Ruppel & Kociolek. The third species is known in the literature by the manuscript name ‘Nitzschia subconstricta Grunow’. However, this name was not validly published and subconstricta has recently been used for another species, described by Desikachary & Prema (1987). Grunows species is validly described here as N. ligowskii Witkowski, Lange-Bertalot, Kociolek & Brzezinska. It inhabits the marine littoral and is characterized by a very wide geographical distribution. The fourth new taxon, described here as N. buschbeckii Witkowski, Lange-Bertalot & Ruppel is known so far only from the Antarctic.

Multigene Assessment of Biodiversity of Diatom(Bacillariophyceae) Assemblages from the Littoral Zone of the Bohai and Yellow Seas in Yantai Region of Northeast China with some Remarks on Ubiquitous Taxa

ABSTRACT Witkowski, A.; Li, C. L.; Zg[lstrok]obicka, I.; Yu, S. X.; Ashworth, M.; Dąbek, P.; Qin, S.; Tang, C.; Krzywda, M.; Ruppel, M.; Theriot, E. C.; Jansen, R. K.; Car, A.; Płociński, T.; Wang, Y. C.; Sabir, J. S. M.; Daniszewska-Kowalczyk, G.; Kierzek, A., and Hajrah, N. H., 2016. Multigene assessment of biodiversity of diatom (Bacillariophyceae) assemblages from the littoral zone of the Bohai and Yellow Seas in Yantai region of Northeast China with some remarks on ubiquitous taxa. Diatoms are important contributors to the benthic microeukaryote flora. This manuscript lays the foundation for future metagenomic and environmental sequencing projects off coastal China by curating diatom DNA sequences from the Yantai region of the Bohai and Yellow Seas (Northeast China). These studies are based on cultures established from samples collected in different seasons from marine littoral and supralittoral zones in 2013 and 2014. Thirty-six diatom strains were cultured successfully and identification of these clones was determined by light and scanning electron microscopy(LM and SEM) and DNA sequencing of the nuclear-encoded small subunit ribosomal RNA (SSU)and chloroplast-encoded rbcL and psbC genes. The strains primarily represent raphid pennate genera, such as Amphora, Amphora (Oxyamphora), Caloneis, Diploneis, Halamphora, Navicula, Nitzschia, Parlibellus, Pleurosigma, Surirella and Tryblionella. When the DNA markers from these strains were analysed in a multi-gene phylogeny, we found that some clones-particularly within the genera Amphora, Navicula and Nitzschia—show greater than expected genetic diversity despite their very similar morphology and morphometrics. We also compared the molecular and morphological identities of several seemingly ubiquitous marine littoral taxa in the genera Amphora and Nitzschia from the Indian Ocean and Atlantic Ocean, the Red Sea and Adriatic Sea to their Yellow Sea counterparts.

Planothidium iberense sp. nov., a new brackish diatom of the Ebro Estuary, northeast Spain

This study describes the diatom species Planothidium iberense sp. nov. from a salinity gradient of the Ebro River Estuary in northeastern Spain. A detailed description is given based on light and scanning electron microscopy observations, and the diatom species is compared with morphologically similar Planothidium species. Planothidium iberense is distinguished from P. linkei mainly by its morphometric characteristics, but also by the presence of multiseriate striae, in contrast to biseriate striae in P. linkei. Planothidium iberense is also distinguished from P. delicatulum and P. septentrionale by the presence of an one-side expanded central area on the sternum valve, which is absent in the latter two Planothidium species.

Description of a new marine diatom, Cocconeis caulerpacola sp. nov. (Bacillariophyceae), epiphytic on invasive Caulerpa species

A new species of Cocconeis has been found growing on thalli of the invasive green alga Caulerpa taxifolia collected from the Croatian Adriatic Sea (Bay of Stari Grad, the Island of Hvar, Central Adriatic, Croatia), the coasts of the Mediterranean (Saint Raphaël, west of Cannes, France) and the eastern coast of Australia (Moreton Bay, southeast Queensland). Additionally, it was observed on samples of Caulerpa racemosa, another invasive alga in the Mediterranean. Preserved thalli of Caulerpa and cleaned material of the new diatom were studied by light and electron microscopy (SEM and TEM). The morphology and fine structure of the new marine epiphytic diatom, for which we propose the name Cocconeis caulerpacola Witkowski, Car & Dobosz, was determined, including the internal and external structure of the raphe and sternum valve, and the cingulum. Comparison between the new species and three closely related species, C. borbonica, C. diruptoides and C. pseudodiruptoides, was made using material from our samples, as well as material from Vis (Adriatic Sea) obtained from the Hustedt collection. Surprisingly, C. caulerpacola is able to colonize Caulerpa taxifolia in very high abundance, but its occurrence seems to be strongly patchy. Indeed, it seems that C. taxifolia is a suitable host for epiphytic diatoms, in particular this tiny Cocconeis, despite its reputation as a ‘killer seaweed’. Cocconeis caulerpacola was observed on Caulerpa species in varying abundance over a wide geographical range.