Manish Sainger

TDZ-induced direct shoot organogenesis and somatic embryogenesis on cotyledonary node explants of lentil (Lens culinaris Medik.)

An efficient and simple procedure for inducing high frequency direct shoot organogenesis and somatic embryogenesis in lentil from cotyledonary node explants (without both the cotyledons) in response to TDZ alone is reported. TDZ at concentration lower than 2.0 μM induced shoot organogenesis whereas at higher concentration (2.5–15 μM) it caused a shift in regeneration from shoot organogenesis to somatic embryogenesis. The cotyledonary node and seedling cultures developed only shoots even at high concentrations of BAP and TDZ, respectively. TDZ at 0.5 and 5.0 μM was found to be optimal for inducing an average of 4–5 shoots per cotyledonary node in 93 % of the cultures and 55 somatic embryos in 68 % of the cultures, respectively. The somatic embryos were germinated when transferred to lower TDZ concentration (0.5–1.0 μM). The shoots were rooted on MS basal medium containing 2.5 μM IBA. The plantlets were obtained within 8 weeks from initiation of culture and were morphologically similar to seed-raised plants. The possible role of stress in thidiazuron induced somatic embryogenesis is discussed.

Assessment of heavy metal tolerance in native plant species from soils contaminated with electroplating effluent

Heavy metals concentrations of (Cr, Zn, Fe, Cu and Ni) were determined in plants and soils contaminated with electroplating industrial effluent. The ranges of total soil Cr, Zn, Fe, Cu and Ni concentrations were found to be 1443-3240, 1376-3112, 683-2228, 263-374 and 234-335 mg kg⁻¹, respectively. Metal accumulation, along with hyperaccumulative characteristics of the screened plants was investigated. Present study highlighted that metal accumulation in different plants varied with species, tissues and metals. Only one plant (Amaranthus viridis) accumulated Fe concentrations over 1000 mg kg⁻¹. On the basis of TF, eight plant species for Zn and Fe, three plant species for Cu and two plant species for Ni, could be used in phytoextraction technology. Although BAF of all plant species was lesser than one, these species exhibited high metal adaptability and could be considered as potential hyperaccumulators. Phytoremediation potential of these plants can be used to remediate metal contaminated soils, though further investigation is still needed.

Increase in Growth, Productivity and Nutritional Status of Rice (Oryza sativa L. cv. Basmati) and Enrichment in Soil Fertility Applied with an Organic Matrix Entrapped Urea

Field experiments were conducted to evaluate the effects of eco-friendly organic matrix entrapped urea (OMEU) on growth, productivity, and yield of rice (Oryza sativa L. cv. Basmati) and soil enrichment in the paddy field at Rohtak (Haryana) located near Delhi. The OMEU prepared in granular form contained cow dung, rice bran (grain cover of Oryza sativa), powder of neem leaves (Azadirachta indica), and clay soil (diameter of particles < 0.02 mm) in 1:1:1:1 ratios and saresh (plant gum of Acacia sp.) as binder along with half of the recommended dose of commercially available soluble urea (free urea; FU). Single basal application of OMEU showed an increase in plant growth in terms of fresh and dry weights, root length, root, leaf and tiller numbers, soluble protein, total N and ammonium in leaves, productivity in terms of grain and straw yield, and nutritional and microbial activities of field soil over free form of urea and no fertilizer application. Nutritional status of rice grains was also improved over the free urea and no fertilizer controls. Our data indicate that OMEU, which is low cost and based on bio-degradable, non-toxic, and locally available agro-waste, can be attempted to replace the conventional use of soluble urea in rice.

Remediation of Nickel-Contaminated Soil by Brassica juncea L. cv. T-59 and Effect of the Metal on Some Metabolic Aspects of the Plant

ABSTRACT Among four cultivars of Brassica juncea L., viz., TM-4, TM-2, RH-30, and T-59, cv. T-59 was relatively more tolerant to nickel (Ni) toxicity based on the growth parameters, seedling vigor index, and metal tolerance index. Nickel application inhibited the activity of the nitrate-assimilating enzyme nitrate reductase in the roots, stem, and leaves, whereas the total organic nitrogen, proline, and activity of a polyamine-metabolizing enzyme, diamine oxidase, increased in this tolerant cultivar (T-59). It accumulated a good amount of Ni from the soil in its root and shoot (i.e., 6.0–6.51 μg Ni g−1 dry weight) during 2 months of cultivation with an 8.0 mM Ni supply in the soil. The data presented in this paper indicate that Ni tolerance and its removal by Indian mustard from subtropical Indian soil is cultivar dependent, possibly due to different genetic and physiological adaptations of the cultivars.

Phytoextraction of Zinc: Physiological and Molecular Mechanism

Zinc is an essential trace element, necessary for plants, animals, and microorganisms. Zn is required for many enzymes as a catalytic cofactor, for photosynthetic CO2 fixation, and in maintaining the integrity of bio-membranes. However, Zn is potentially toxic when accumulated beyond cellular needs. Phytoextraction technique, which is a part of phytoremediation, has opened new avenues for remediation of Zn-contaminated places. Hyperaccumulators like Thlaspi caerulescens and Arabidopsis halleri have been identified, which can accumulate up to 40,000 mg kg−1 Zn in the aerial parts of the plant body. Carboxylic acids, primarily malate, citrate, and oxalate, and amino acids are found to play an important role in Zn hyperaccumulation. Transmembrane metal transporters are assumed to play a key role in Zn metal uptake, xylem loading, and vacuolar sequestration. Members of CDF (cation diffusion facilitator) and ZIP (zinc-regulated transporter, iron-regulated transporter like protein) family have been implicated in Zn-metal-tolerance mechanisms. A potential metal-binding motif, containing multiple histidine residues, is found in the variable regions of almost all of the ZIP family, including ZIP1, ZIP2, ZIP4, ZRT1, and ZRT2. Overexpression of some Zn metal transporter genes like TcZNT1 (Thlaspi caerulescens Zn transporter1), TcHMA4 (Thlaspi caerulescens heavy metal ATPase) in Thlaspi caerulescens, AhMTP1;3 (Arabidopsis halleri metal transporter1;3) in Arabidopsis halleri, and PtdMTP1(Poplar metal transporter1) from a hybrid poplar confer Zn hypertolerance in Thlaspi, Arabidopsis, and Poplar plant species.

Progress and Challenges in Improving the Nutritional Quality of Rice (Oryza sativa L.)

ABSTRACT Rice is a staple food for more than 3 billion people in more than 100 countries of the world but ironically it is deficient in many bioavailable vitamins, minerals, essential amino- and fatty-acids and phytochemicals that prevent chronic diseases like type 2 diabetes, heart disease, cancers, and obesity. To enhance the nutritional and other quality aspects of rice, a better understanding of the regulation of the processes involved in the synthesis, uptake, transport, and metabolism of macro-(starch, seed storage protein and lipid) and micronutrients (vitamins, minerals and phytochemicals) is required. With the publication of high quality genomic sequence of rice, significant progress has been made in identification, isolation, and characterization of novel genes and their regulation for the nutritional and quality enhancement of rice. During the last decade, numerous efforts have been made to refine the nutritional and other quality traits either by using the traditional breeding with high through put technologies such as marker assisted selection and breeding, or by adopting the transgenic approach. A significant improvement in vitamins (A, folate, and E), mineral (iron), essential amino acid (lysine), and flavonoids levels has been achieved in the edible part of rice, i.e., endosperm (biofortification) to meet the daily dietary allowance. However, studies on bioavailability and allergenicity on biofortified rice are still required. Despite the numerous efforts, the commercialization of biofortified rice has not yet been achieved. The present review summarizes the progress and challenges of genetic engineering and/or metabolic engineering technologies to improve rice grain quality, and presents the future prospects in developing nutrient dense rice to save the everincreasing population, that depends solely on rice as the staple food, from widespread nutritional deficiencies.

Increase in Growth, Productivity and Nutritional Status of Wheat (Triticum aestivum L.) and enrichment in Soil Microbial Population Applied with Biofertilizers Entrapped with Organic Matrix

To find effective alternatives to reduce the application of conventional urea (CU), a conventional biofertilizer (CB) preparation (charcoal mixed Azotobacter chroococcum and Bacillus subtilis) and the same biofertilizers entrapped in an organic matrix consisting of cow dung, rice bran, dried powder of neem leaves, and clay soil in 1:1:1:1 ratio and 25% (w/w) saresh (plant gum of Acacia sp.), named as super granules of biofertilizers (SGBF) were applied to cultivate wheat (Triticum aestivum L. cv. ‘WH-711’) in experimental plots. The results revealed that the efficacy of commercially available charcoal mixed biofertilizers could not prove as effective alternative to CU, whereas the same dose of biofertilizers entrapped in the organic matrix, SGBF, resulted in a significant increase in growth and productivity of wheat. It appears that SGBF prepared and applied in this study is an effective organic alternative to the urea for wheat cultivation in semi-arid subtropical agro-ecosystems.

Eco-friendly Nitrogen Fertilizers for Sustainable Agriculture

Agriculture meets two great sustainability challenges: first one is ability to provide nutrition to the world population and another one is to improve ecosystem services to maintain clean air, water, and other benefits to humanity. Appropriate nitrogen management is one of the primary challenges in agricultural production. Its application to agricultural and horticultural crops in conventional chemical forms causes significant increase in crop yield. Generally, farmers apply overdoses of chemical fertilizers in their agriculture field in order to maximize the crop productivity and about 50–70% of the applied conventional chemical fertilizers get lost in the environment due to leaching, runoff, emissions and volatilization in soil, water, and air. It causes agronomical, economic, environmental concerns, and health threats. Organic manures (OM) and bio-fertilizers are considered as possible alternatives for eco-friendly, economic, and organic agriculture, however, due to problems of limited availability and bulk transport of manures and low efficacy of OM and microbial bio-fertilizers, the use of conventional chemical fertilizers is still in practice in main stream agriculture. Slow (controlled) release fertilizers (SRFs) that release the nutrients slowly or synchronized with the growth rate and physiological need of plants increase the nutrient recovery to a great extent and minimize the nutrient losses and the resultant environmental hazards caused by the excessive use of soluble chemical fertilizers. The SRFs are new type of eco-friendly plant nutrient providers that can be used as a feasible alternative to the chemical fertilizers. However, the cost effectiveness of the commercial SRF formulations and lack of awareness on ill effects of chemical fertilizers are major limitations for replacing the conventional chemical fertilizers by slow release fertilizers and other customized fertilizers especially in the developing world. We have developed organic matrix based slow release fertilizers using biodegradable non-toxic and locally available agro-waste/agro-products which are low cost, highly efficient, and eco-friendly that enhance crop productivity as well as soil fertility in the applied fields. It is evident from the earlier reports and our own work that during consistent supply of exogenous N either through the split doses or through the SRFs, accumulation of inorganic N occurs in aerial sinks of plants, i.e., mature leaves and grains increases. A manipulation of source–sink relationship, transport and remobilization of the nutrients, and enhanced assimilation of accumulated inorganic N in plants during reproductive phases, in addition to application of the customized fertilizers, will lead to alleviate yield and improved food quality. Present chapter critically review the potentiality of N based SRFs and genetic manipulations for enhanced NUE for sustainable plant productivity as a viable alternative to the green revolution based nutritional packages.

Biotechnological Approaches to Mitigate Adverse Effects of Extreme Climatic Factors on Plant Productivity

Elevated carbon dioxide (CO2), high temperature, drought, cold and freezing, and buildup of the greenhouse gases and suspended particulate matters (SPMs) in the air, the major consequences of climate change and climate variability, affect plant productivity in various ways. To mitigate the negative effects of these climatic factors on plants, a clear understanding of complex tolerance mechanisms involved in making plants more tolerant to these multiple stresses is necessary. The various metabolic and molecular pathways involved in inducing tolerance to these odd climatic conditions indicate that multiple genetic regulatory systems are involved in mitigating these stresses. However, the share of various metabolic shifts in providing tolerance to the plants is not yet clear. The conventional breeding is unable to manage such complex genetic traits; therefore, scientists are looking for Gene Technologies to handle this problem. The genetic transformation of plants with regulatory genes, e.g., transcription factors, has paved a way to produce improved plant varieties possessing tolerance to the multiple stresses that originated from the climate change. The pertinent literature indicates that a lot more is to be done to overcome the challenges in developing transgenic plants suitable for the future climate. It needs an urgent attention to resolve the availability of plant-based products in the recent future.

Sesame (Sesamum indicum L.).

Sesame (Sesamum indicum L.) is an important oilseed crop grown in India, China, Korea, Russia, Turkey, Mexico, South America, and several countries of Africa. Sesame seeds are rich in oil, proteins, unsaturated fatty acids, vitamins, minerals, and folic acid. Nearly 70% of the worlds sesame is processed into oil and meal, while the remainder is channeled to food and confectionery industries. Production of sesame is limited by several fungal diseases, water logging, salinity, and shattering of seed capsules during harvest. Introgression of useful genes from wild species into cultigens by conventional breeding has not been successful due to postfertilization barriers. The only alternative for the improvement of S. indicum is to transfer genes from other sources through genetic transformation techniques. Here, we describe a simple, fast, and reproducible method for the Agrobacterium-mediated genetic transformation of S. indicum which may be employed for the transfer of desirable traits into this economically important oilseed crop.