Marc Reinig
University of California, Santa Cruz
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Featured researches published by Marc Reinig.
Optics Letters | 2011
Oscar Azucena; Justin Crest; Shaila Kotadia; William Sullivan; Xiaodong Tao; Marc Reinig; Donald Gavel; Scot S. Olivier; Joel Kubby
We report a technique for measuring and correcting the wavefront aberrations introduced by a biological sample using a Shack-Hartmann wavefront sensor, a fluorescent reference source, and a deformable mirror. The reference source and sample fluorescence are at different wavelengths to separate wavefront measurement and sample imaging. The measurement and correction at one wavelength improves the resolving power at a different wavelength, enabling the structure of the sample to be resolved.
Proceedings of SPIE | 2008
Donald Gavel; S. Mark Ammons; Brian J. Bauman; Daren Dillon; Elinor L. Gates; Bryant Grigsby; Jess Johnson; Chris Lockwood; Kathleen Morzinski; David Palmer; Marc Reinig; Scott Severson
The Lick Observatory is pursuing new technologies for adaptive optics that will enable feasible low cost laser guidestar systems for visible wavelength astronomy. The Villages system, commissioned at the 40 inch Nickel Telescope this past Fall, serves as an on-sky testbed for new deformable mirror technology (high-actuator count MEMS devices), open-loop wavefront sensing and control, pyramid wavefront sensing, and laser uplink correction. We describe the goals of our experiments and present the early on-sky results of AO closed-loop and open-loop operation. We will also report on our plans for on-sky tests of the direct-phase measuring pyramid-lenslet wavefront sensor and plans for installing a laser guidestar system.
Optics Express | 2015
Xiaodong Tao; Dare Bodington; Marc Reinig; Joel Kubby
Using the fast measurement of a binary transmission matrix and a digital micromirror device, we demonstrate high-speed interferometric focusing through highly dynamic scattering media with binary intensity modulation. The scanning of speckles for reference optimization gives stable focusing, which can be used for focusing through a fast changing media or two dimensional scanning through a slowly changing scattering media. The system allows dynamic focusing at 12.5 Hz with 1024 input modes, and more than 60 times intensity enhancement. It was tested with a moving diffuser, a mouse brain and skull tissue. The experiment with a live drosophila embryo shows its potential in compensating dynamic scattering in live biological tissue.
Proceedings of SPIE | 2010
Katie M. Morzinski; Luke C. Johnson; Donald Gavel; Bryant Grigsby; Daren Dillon; Marc Reinig; Bruce A. Macintosh
At the University of Californias Lick Observatory, we have implemented an on-sky testbed for next-generation adaptive optics (AO) technologies. The Visible-Light Laser Guidestar Experiments instrument (ViLLaGEs) includes visible-light AO, a micro-electro-mechanical-systems (MEMS) deformable mirror, and open-loop control of said MEMS on the 1-meter Nickel telescope at Mt. Hamilton. (Open-loop in this sense refers to the MEMS being separated optically from the wavefront sensing path; the MEMS is still included in the control loop.) Future upgrades include predictive control with wind estimation and pyramid wavefront sensing. Our unique optical layout allows the wavefronts along the open- and closed-loop paths to be measured simultaneously, facilitating comparison between the two control methods. In this paper we evaluate the performance of ViLLaGEs in openand closed-loop control, finding that both control methods give equivalent Strehl ratios of up to ~ 7% in I-band and similar rejection of temporal power. Therefore, we find that open-loop control of MEMS on-sky is as effective as closed-loop control. Furthermore, after operating the system for three years, we find MEMS technology to function well in the observatory environment. We construct an error budget for the system, accounting for 130 nm of wavefront error out of 190 nm error in the science-camera PSFs. We find that the dominant known term is internal static error, and that the known contributions to the error budget from open-loop control (MEMS model, position repeatability, hysteresis, and WFS linearity) are negligible.
Proceedings of SPIE | 2008
Donald Gavel; Richard G. Dekany; Claire E. Max; Peter L. Wizinowich; Sean M. Adkins; Brian J. Bauman; James H. Bell; Erik M. J. Johansson; Renate Kupke; Chris Lockwood; Anna M. Moore; Chris Neyman; Marc Reinig; Viswa Velur
The Next Generation Adaptive Optics (NGAO) system will represent a considerable advancement for high resolution astronomical imaging and spectroscopy at the W. M. Keck Observatory. The AO system will incorporate multiple laser guidestar tomography to increase the corrected field of view and remove the cone effect inherent to single laser guide star systems. The improvement will permit higher Strehl correction in the near-infrared and diffraction-limited correction down to R band. A high actuator count micro-electromechanical system (MEMS) deformable mirror will provide the on-axis wavefront correction to a number of instrument stations and additional MEMS devices will feed multiple channels of a deployable integral-field spectrograph. In this paper we present the status of the AO system design and describe its various operating modes.
Proceedings of SPIE | 2008
Bryant Grigsby; Chris Lockwood; Brian Baumann; Donald Gavel; Jess Johnson; S. Mark Ammons; Daren Dillon; Katie M. Morzinski; Marc Reinig; Dave Palmer; Scott Severson; Elinor L. Gates
Visible Light Laser Guidestar Experiments (ViLLaGEs) is a new Micro-Electro Mechanical Systems (MEMS) based visible-wavelength adaptive optics (AO) testbed on the Nickel 1-meter telescope at Lick Observatory. Closed loop Natural Guide Star (NGS) experiments were successfully carried out during engineering during the fall of 2007. This is a major evolutionary step, signaling the movement of AO technologies into visible light with a MEMS mirror. With on-sky Strehls in I-band of greater than 20% during second light tests, the science possibilities have become evident. Described here is the advanced engineering used in the design and construction of the ViLLaGEs system, comparing it to the LickAO infrared system, and a discussion of Nickel dome infrastructural improvements necessary for this system. A significant portion of the engineering discussion revolves around the sizable effort that went towards eliminating flexure. Then, we detail upgrades to ViLLaGEs to make it a facility class instrument. These upgrades will focus on Nyquist sampling the diffraction limited point spread function during open loop operations, motorization and automation for technician level alignments, adding dithering capabilities and changes for near infrared science.
Proceedings of SPIE | 2005
Donald Gavel; Marc Reinig; Carlos Cabrera
An adaptive optics system using multiple deformable mirrors and an array of guidestars can correct over a wider field of view than traditional single DM systems and can also eliminate the cone-effect error due to the finite altitude of laser guidestars. In large telescope systems, such as the envisioned 30-meter telescope, or TMT, the extraordinarily large amount of computation needed to implement multi-conjugate adaptive optics at atmospheric turnover rates is prohibitive for ordinary CPUs, even when another ten years of computer development is taken into account. We present here a novel approach, implementing a fast iterative version of the key inverse tomography calculations in an array of parallel computing elements. Our initial laboratory experiments using field-programmable gate arrays (FPGAs) are promising in terms of speed and convergence rates. In this paper we present the theory and results from simulations and experiments.
MEMS Adaptive Optics V | 2011
Oscar Azucena; Xiaodong Tao; Justin Crest; Shaila Kotadia; William Sullivan; Donald Gavel; Marc Reinig; Scot S. Olivier; Joel Kubby
We demonstrated the used of an adaptive optic system in biological imaging to improve the imaging characteristics of a wide field microscope. A crimson red fluorescent bead emitting light at 650 nm was used together with a Shack-Hartmann wavefront sensor and deformable mirror to compensate for the aberrations introduce by a Drosophila embryo. The measurement and correction at one wavelength improves the resolving power at a different wavelength, enabling the structure of the sample to be resolved (510 nm). The use of the crimson beads allow for less photobleaching to be done to the science object of the embryo, in this case our GFP model (green fluorescent beads), and allows for the science object and wavefront reference to be spectrally separated. The spectral separation allows for single points sources to be used for wavefront measurements, which is a necessary condition for the Shack-Hartmann Wavefront sensor operation.
Proceedings of SPIE | 2008
Luke C. Johnson; Donald Gavel; Marc Reinig; Donald M. Wiberg
Performance of adaptive optics (AO) systems is limited by the tradeoff between photon noise at the wavefront sensor and temporal error from the duty cycle of the controller. Optimal control studies have shown that this temporal error can be reduced by predicting the turbulence evolution during the control cycle. We formulate a wind model that divides the wind into two components: a quasi-static layer and a wind-driven frozen-flow layer. Using this internal wind model, we design a computationally efficient controller that is able to estimate and predict the dynamics of a single windblown layer and simulate this controller using on-sky data from the Palomar Adaptive Optics system. We also present results from a laboratory implementation of multi-conjugate AO (MCAO) with multi-layer wind estimation in conjunction with tomographic reconstruction. The tomography engine breaks the atmosphere into discrete layers, each with its own wind estimator. The resulting MCAO control algorithm is able to track and predict the motion of multiple wind layers with wind estimates that update at every controller cycle. Once the wind velocities of each layer are known, the deformable mirror update speed is no longer limited by the wavefront sensor exposure time so it is possible to send multiple correction updates to the deformable mirror each control cycle in order to dynamically track wind layers across the telescope aperture. The result is better dynamics in the feedback control system that enables higher closed-loop bandwidth for a given wavefront sensor frame rate.
Journal of Biomedical Optics | 2016
Marc Reinig; Samuel W. Novak; Xiaodong Tao; Laurent A. Bentolila; Dustin G. Roberts; Allan MacKenzie-Graham; Sirie E. Godshalk; Mary A. Raven; David W. Knowles; Joel Kubby
Abstract. Our ability to see fine detail at depth in tissues is limited by scattering and other refractive characteristics of the tissue. For fixed tissue, we can limit scattering with a variety of clearing protocols. This allows us to see deeper but not necessarily clearer. Refractive aberrations caused by the bulk index of refraction of the tissue and its variations continue to limit our ability to see fine detail. Refractive aberrations are made up of spherical and other Zernike modes, which can be significant at depth. Spherical aberration that is common across the imaging field can be corrected using an objective correcting collar, although this can require manual intervention. Other aberrations may vary across the imaging field and can only be effectively corrected using adaptive optics. Adaptive optics can also correct other aberrations simultaneously with the spherical aberration, eliminating manual intervention and speeding imaging. We use an adaptive optics two-photon microscope to examine the impact of the spherical and higher order aberrations on imaging and contrast the effect of compensating only for spherical aberration against compensating for the first 22 Zernike aberrations in two tissue types. Increase in image intensity by 1.6× and reduction of root mean square error by 3× are demonstrated.