Marco Paolantoni

Hydrogen bond dynamics and water structure in glucose-water solutions by depolarized Rayleigh scattering and low-frequency Raman spectroscopy

The effect of glucose on the relaxation process of water at picosecond time scales has been investigated by depolarized Rayleigh scattering (DRS) experiments. The process is assigned to the fast hydrogen bonding dynamics of the water network. In DRS spectra this contribution can be safely separated from the slower relaxation process due to the sugar. The detected relaxation time is studied at different glucose concentrations and modeled considering bulk and hydrating water contributions. As a result, it is found that in diluted conditions the hydrogen bond lifetime of proximal water molecules becomes about three times slower than that of the bulk. The effect of the sugar on the hydrogen bond water structure is investigated by analyzing the low-frequency Raman (LFR) spectrum sensitive to intermolecular modes. The addition of glucose strongly reduces the intensity of the band at 170 cm(-1) assigned to a collective stretching mode of water molecules arranged in cooperative tetrahedral domains. These findings indicate that proximal water molecules partially lose the tetrahedral ordering typical of the bulk leading to the formation of high density environments around the sugar. Thus the glucose imposes a new local order among water molecules localized in its hydration shell in which the hydrogen bond breaking dynamics is sensitively retarded. This work provides new experimental evidences that support recent molecular dynamics simulation and thermodynamics results.

Broadband Depolarized Light Scattering Study of Diluted Protein Aqueous Solutions

A broadband depolarized light scattering (DLS) study is performed on diluted lysozyme aqueous solutions as a function of temperature and concentration. The dynamical susceptibility, obtained in a wide spectral range (0.6-36000 GHz) through the coupled use of interferometric and dispersive devices, is interpreted and compared with neutron scattering and Raman-induced optical Kerr-effect literature data, thus giving a general picture of relaxation phenomena. We show that the proposed approach represents a suitable tool for investigating the hydration dynamics of protein-water solutions. A detailed analysis of the quasi-elastic scattering region evidences the existence of two distinct relaxational processes at picosecond time scales. The fast process (fractions of picosecond) is attributed to bulk water dynamics, while the slow one (few picoseconds) is attributed to dynamical rearrangements of water molecules strongly influenced by the protein (hydration water). The retardation effect here estimated of about 6-7 can be regarded as a direct measure of the increased protein-water and water-water hydrogen bond stability of the water molecules within the protein hydration shell. Interestingly, a similar effect was previously observed on small hydrophilic sugar molecules. Moreover, backbone and side chains torsional motions of the protein in the 600-5300 GHz frequency range are found to be insensitive to thermal variations and to eventual changes occurring in the premelting zone.

More Is Different: Experimental Results on the Effect of Biomolecules on the Dynamics of Hydration Water.

Biological interfaces characterized by a complex mixture of hydrophobic, hydrophilic, or charged moieties interfere with the cooperative rearrangement of the hydrogen-bond network of water. In the present study, this solute-induced dynamical perturbation is investigated by extended frequency range depolarized light scattering experiments on an aqueous solution of a variety of systems of different nature and complexity such as small hydrophobic and hydrophilic molecules, amino acids, dipeptides, and proteins. Our results suggest that a reductionist approach is not adequate to describe the rearrangement of hydration water because a significant increase of the dynamical retardation and extension of the perturbation occurs when increasing the chemical complexity of the solute.

Dynamics of Biological Water: Insights from Molecular Modeling of Light Scattering in Aqueous Trehalose Solutions

Extended depolarized light scattering (EDLS) measurements have been recently employed to investigate the dynamics of water solvating biological molecules, giving evidence of the presence of two different dynamical regimes among water molecules. An interpretation of EDLS has been proposed that provides an independent estimate of the retardation factor of slowdown with respect to fast water molecules and of the number of solvent molecules affected by this slowing down. Nevertheless this measure is an inherently complex one, due to the collective nature of the physical property probed. In the present work a molecular dynamics (MD) approach has been used to more deeply understand experimental results. Time correlation functions of the collective polarizability anisotropy have been calculated for the prototype disaccharide trehalose in aqueous solutions as a function of concentration. The unique capability of MD to disentangle the contributions to the dynamics arising from solute, solvent, and cross terms between the two allowed us to check the reliability of an interpretation that assumes a spectral separation of water and sugar dynamics, as well as to highlight the very presence of two distinct relaxation processes in water. The two processes have been attributed to the dynamics of bulk and hydration water, respectively. A retardation factor of ~5 and concentration dependent hydration numbers have been observed, in good agreement with experimental results [Paolantoni, M.; et al. J. Phys. Chem. B 2009, 113, 7874-7878].

Extended frequency range depolarized light scattering study of N-acetyl-leucine-methylamide-water solutions.

We have studied the influence of the amphiphilic model peptide N-acetyl-leucine-methylamide (NALMA) on the dynamics of water using extended frequency range depolarized light scattering (EDLS), between 0.3 GHz and 36 THz. This technique allowed us to separate solute from solvent dynamics and bulk from hydration water, providing both characteristic times and relative fractions. In the temperature range 5-65 °C, a retardation factor from 9 to 7 is found for water hydrating NALMA. Moreover, in the same range, a hydration number from 62 to 50 is observed, corresponding to more than two hydration layers. This strong perturbation suggests the existence of a collective effect of amphiphilic molecules on surrounding water molecules.

New insights on the incorporation of lanthanide ions into nanosized layered double hydroxides.

Nanosized Layered Double Hydroxides (LDH) were prepared in confined environment through the microemulsion method in the presence of different lanthanide cations (Ln(III) = Eu(III), Yb(III), Tb(III), and Nd(III)). To investigate the effects of lanthanide insertion in the sheets of LDH materials, several samples were prepared upon progressively increasing the content of Ln ions and properly reducing the Al(III) amount; the samples were characterized in terms of metal content, structure, morphology, thermal behavior, and spectroscopic properties. The data revealed that Ln(III) content in the LDH samples depends on the ionic radius of the lanthanide cations and on its concentration in the starting microemulsion. X-ray powder diffraction (XRPD) indicated that Eu(III) can be inserted into the LDH structure in average atomic percentages lower than 2.7%, leading to the formation of a low symmetry phase, as confirmed by steady state luminescence spectra; while Yb(III) can be incorporated into the layer structure up to about 10% forming a pure layered phase containing the lanthanide in the sheet. The incorporation of Yb(III) and Eu(III) into the LDH sheets is also supported by FT-IR measurements. Coupled thermogravimetrical (TG) and differential scanning calorimetric (DSC) studies indicated that water molecules are essential in the coordination sphere of incorporated Ln cations; this observation accounts for the lower thermal stability of Ln-doped LDH compared to the undoped ones. Furthermore, Eu-luminescence measurements indicates that the lanthanide inclusion does not compromise its luminescence although the spectral position and brightness can be tuned by the loading.

Unfolding and aggregation of lysozyme: a thermodynamic and kinetic study by FTIR spectroscopy.

The unfolding of hen egg-white lysozyme dissolved both in D(2)O and CH(3)CH(2)OD/D(2)O was studied by Fourier Transform Infrared (FTIR) absorption spectroscopy at different protein concentrations. A detailed description of the local and global rearrangement of the secondary structure upon a temperature increase, in the range 295 to 365K, was obtained through the analysis of the amide I band. Thermodynamic parameters for the melting, and the effect of the co-solvent in determining a change in thermal stability of the protein were evaluated. The protein-protein interactions were also followed as a function of temperature: a strong dependence of the cluster stability and aggregation yield on the solvent composition was observed. Finally, FTIR spectra taken at successive time steps of the aggregation enabled intermolecular contacts to be monitored as a function of time, and kinetic information to be obtained showing that both unfolded and folded states of lysozyme act as reactants for the clustering event.

Non-coincidence effect of aromatic ring vibrations

The non-coincidence of the maxima of the isotropic and the anisotropic profiles in Raman spectra has always been considered an efficacious probe of the structure and dynamics of polar liquids. An anomalous, negative non-coincidence effect has been observed in ring breathing modes of aromatic molecules, without dipole moment (p -xylene, mesitylene) or with a weak permanent dipole (toluene, o -xylene, m -xylene). Temperature effects and isotopic dilution have also been performed in toluene and o -xylene, confirming the presence of a resonant coupling mechanism. Previous analogous results of other aromatic non-polar liquids (benzene, hexafluorobenzene) have been confirmed. It has been hypothesized that quadrupolar intermolecular forces and steric repulsive interactions balance each other giving final negative values of non-coincidence effect.

Polarizability anisotropy relaxation in liquid ethanol: A molecular dynamics study

Molecular dynamics simulation is used to study the relaxation of the polarizability anisotropy in liquid ethanol at temperatures of 298 and 348 K. Ethanol molecules are represented by a four-site semi-flexible model in which the internal degree of freedom, corresponding to the torsional motion around the C–O bond, is taken into consideration. The molecular polarizability is calculated using an interaction-site model, based on the modified dipole-induced dipole model developed by Thole. The collective polarizability induced by intermolecular interactions is included using first-order perturbation theory and calculated considering both center–center and site–site models. Results are analyzed in terms of projected variables that allow the decomposition of the total relaxation into orientational and collision-induced components, both of which are influenced by molecular flexibility. We compare our data with the results of low-frequency depolarized Rayleigh light scattering experiments, examining the possibili...

Vibrational circular dichroism spectra of lysozyme solutions: solvent effects on thermal denaturation processes.

Vibrational spectroscopy has been applied to the study of conformational variation of lysozyme during thermal denaturation. An infrared and vibrational circular dichroism (VCD) analysis of lysozyme in D2O, D2O/EtOD, and D2O/DMSO at different solvent compositions and pHs was accomplished. Complete deuteration effects on amidic groups were revealed through the analysis of the amide I band of lysozyme dissolved in deuterated water. The comparison of IR absorption and VCD spectra of lysozyme in D2O revealed the higher sensitivity of the VCD technique to the presence of partially or fully deuterated secondary structure of lysozyme. Aggregation was induced by thermalization of lysozyme at different solvent compositions and pH values. Interestingly, IR and VCD showed different sensitivities to reveal intermolecular β-sheet aggregation under thermal denaturation. The VCD intensity enhancement was observed as the aggregate dimension increased, whereas IR was sensitive to the nucleation step of the process. Moreover, chirality of supramolecular species was revealed through the analysis of the VCD sign pattern. For the first time, we demonstrate how aggregates produced under different solvent compositions but similar pHs showed the same VCD sign pattern and consequently the same sense of growth.