Maria C. Hernandez-Soriano

Silver sulfide nanoparticles (Ag2S-NPs) are taken up by plants and are phytotoxic

Abstract Silver nanoparticles (NPs) are used in more consumer products than any other nanomaterial and their release into the environment is unavoidable. Of primary concern is the wastewater stream in which most silver NPs are transformed to silver sulfide NPs (Ag2S-NPs) before being applied to agricultural soils within biosolids. While Ag2S-NPs are assumed to be biologically inert, nothing is known of their effects on terrestrial plants. The phytotoxicity of Ag and its accumulation was examined in short-term (24 h) and longer-term (2-week) solution culture experiments with cowpea (Vigna unguiculata L. Walp.) and wheat (Triticum aestivum L.) exposed to Ag2S-NPs (0–20 mg Ag L−1), metallic Ag-NPs (0–1.6 mg Ag L−1), or ionic Ag (AgNO3; 0–0.086 mg Ag L−1). Although not inducing any effects during 24-h exposure, Ag2S-NPs reduced growth by up to 52% over a 2-week period. This toxicity did not result from their dissolution and release of toxic Ag+ in the rooting medium, with soluble Ag concentrations remaining below 0.001 mg Ag L−1. Rather, Ag accumulated as Ag2S in the root and shoot tissues when plants were exposed to Ag2S-NPs, consistent with their direct uptake. Importantly, this differed from the form of Ag present in tissues of plants exposed to AgNO3. For the first time, our findings have shown that Ag2S-NPs exert toxic effects through their direct accumulation in terrestrial plant tissues. These findings need to be considered to ensure high yield of food crops, and to avoid increasing Ag in the food chain.

Long-term effect of biochar on the stabilization of recent carbon: soils with historical inputs of charcoal

This study was set up to identify the long‐term effect of biochar on soil C sequestration of recent carbon inputs. Arable fields (n = 5) were found in Belgium with charcoal‐enriched black spots (>50 m2; n = 14) dating >150 years ago from historical charcoal production mound kilns. Topsoils from these ‘black spots’ had a higher organic C concentration [3.6 ± 0.9% organic carbon (OC)] than adjacent soils outside these black spots (2.1 ± 0.2% OC). The soils had been cropped with maize for at least 12 years which provided a continuous input of C with a C isotope signature (δ13C) −13.1, distinct from the δ13C of soil organic carbon (−27.4 ‰) and charcoal (−25.7 ‰) collected in the surrounding area. The isotope signatures in the soil revealed that maize‐derived C concentration was significantly higher in charcoal‐amended samples (‘black spots’) than in adjacent unamended ones (0.44% vs. 0.31%; P = 0.02). Topsoils were subsequently collected as a gradient across two ‘black spots’ along with corresponding adjacent soils outside these black spots and soil respiration, and physical soil fractionation was conducted. Total soil respiration (130 days) was unaffected by charcoal, but the maize‐derived C respiration per unit maize‐derived OC in soil significantly decreased about half (P < 0.02) with increasing charcoal‐derived C in soil. Maize‐derived C was proportionally present more in protected soil aggregates in the presence of charcoal. The lower specific mineralization and increased C sequestration of recent C with charcoal are attributed to a combination of physical protection, C saturation of microbial communities and, potentially, slightly higher annual primary production. Overall, this study provides evidence of the capacity of biochar to enhance C sequestration in soils through reduced C turnover on the long term.

Mechanisms of enhanced mobilisation of trace metals by anionic surfactants in soil

Long-term applications of small concentrations of surfactants in soil via wastewater irrigation or pesticide application may enhance trace metal solubility. Mechanisms by which anionic surfactants (Aerosol 22, SDS and Biopower) affect trace metal solubility were assessed using batch, incubation and column experiments. In batch experiments on seven soils, the concentrations of Cu, Cd, Ni and Zn in the dissolved fraction of soils increased up to 100-fold at the high application rates, but increased less than 1.5-fold below the critical micelle concentration. Dissolved metal concentrations were less than 20% affected by surfactants in long-term incubations (70 days) up to the largest dose of 200 mg C kg(-1) soil. Leaching soil columns with A22 (100-1000 mg C L(-1)) under unsaturated conditions increased trace metal concentrations in the leachates 2-4 fold over the control. Correlation analysis and speciation modelling showed that the increased solubility of metals upon surfactant application was more related to the solubilisation of soil organic matter from soil than to complexation of the metals with the surfactant. Organic matter from soil was solubilised in response to a decrease of solution Ca(2+) as a result of Ca-surfactant precipitation. At environmentally relevant concentrations, surfactant application is unlikely to have a significant effect on trace metal mobility.

Synchrotron-based techniques shed light on mechanisms of plant sensitivity and tolerance to high manganese in the root environment

Mn toxicity results from apoplastic accumulation in soybean leaves, while tolerance occurs through vacuolar Mn(II) sequestration in two lupin species and oxidation to Mn(III) in trichomes of sunflower. Plant species differ in response to high available manganese (Mn), but the mechanisms of sensitivity and tolerance are poorly understood. In solution culture, greater than or equal to 30 µm Mn decreased the growth of soybean (Glycine max), but white lupin (Lupinus albus), narrow-leafed lupin (Lupin angustifolius), and sunflower (Helianthus annuus) grew well at 100 µm Mn. Differences in species’ tolerance to high Mn could not be explained simply by differences in root, stem, or leaf Mn status, being 8.6, 17.1, 6.8, and 9.5 mmol kg–1 leaf fresh mass at 100 µm Mn. Furthermore, x-ray absorption near edge structure analyses identified the predominance of Mn(II), bound mostly to malate or citrate, in roots and stems of all four species. Rather, differences in tolerance were due to variations in Mn distribution and speciation within leaves. In Mn-sensitive soybean, in situ analysis of fresh leaves using x-ray fluorescence microscopy combined with x-ray absorption near edge structure showed high Mn in the veins, and manganite [Mn(III)] accumulated in necrotic lesions apparently through low Mn sequestration in vacuoles or other vesicles. In the two lupin species, most Mn accumulated in vacuoles as either soluble Mn(II) malate or citrate. In sunflower, Mn was sequestered as manganite at the base of nonglandular trichomes. Hence, tolerance to high Mn was ascribed to effective sinks for Mn in leaves, as Mn(II) within vacuoles or through oxidation of Mn(II) to Mn(III) in trichomes. These two mechanisms prevented Mn accumulation in the cytoplasm and apoplast, thereby ensuring tolerance to high Mn in the root environment.

Biochar affects carbon composition and stability in soil: a combined spectroscopy-microscopy study

The use of biochar can contribute to carbon (C) storage in soil. Upon addition of biochar, there is a spatial reorganization of C within soil particles, but the mechanisms remain unclear. Here, we used Fourier transformed infrared-microscopy and confocal laser scanning microscopy to examine this reorganization. A silty-loam soil was amended with three different organic residues and with the biochar produced from these residues and incubated for 237 d. Soil respiration was lower in biochar-amended soils than in residue-amended soils. Fluorescence analysis of the dissolved organic matter revealed that biochar application increased a humic-like fluorescent component, likely associated with biochar-C in solution. The combined spectroscopy-microscopy approach revealed the accumulation of aromatic-C in discrete spots in the solid-phase of microaggregates and its co-localization with clay minerals for soil amended with raw residue or biochar.The co-localization of aromatic-C:polysaccharides-C was consistently reduced upon biochar application. We conclude that reduced C metabolism is an important mechanism for C stabilization in biochar-amended soils.

Partitioning of carbon sources among functional pools to investigate short-term priming effects of biochar in soil: A 13C study

Biochar sequesters carbon (C) in soils because of its prolonged residence time, ranging from several years to millennia. In addition, biochar can promote indirect C-sequestration by increasing crop yield while, potentially, reducing C-mineralization. This laboratory study was set up to evaluate effects of biochar on C-mineralization with due attention to source appointment by using (13)C isotope signatures. An arable soil (S) (7.9 g organic C, OC kg(-1)) was amended (single dose of 10 g kg(-1) soil) with dried, grinded maize stover (leaves and stalks), either natural (R) or (13)C enriched (R*), and/or biochar (B/B*) prepared from the maize stover residues (450 °C). Accordingly, seven different combinations were set up (S, SR, SB, SR*, SB*, SRB*, SR*B) to trace the source of C in CO2 (180 days), dissolved organic-C (115 days) and OC in soil aggregate fractions (90 days). The application of biochar to soil reduced the mineralization of native soil organic C but the effect on maize stover-C mineralization was not consistent. Biochar application decreased the mineralization of the non-enriched maize stover after 90 days, this being consistent with a significant reduction of dissolved organic C concentration from 45 to 18 mg L(-1). However, no significant effect was observed for the enriched maize stover, presumably due to differences between the natural and enriched materials. The combined addition of biochar and enriched maize stover significantly increased (twofold) the presence of native soil organic C or maize derived C in the free microaggregate fraction relative to soil added only with stover. Although consistent effects among C sources and biochar materials remains elusive, our outcomes indicate that some biochar products can reduce mineralization and solubilization of other sources of C while promoting their physical protection in soil particles.

Structural functionality, catalytic mechanism modeling and molecular allergenicity of phenylcoumaran benzylic ether reductase, an olive pollen (Ole e 12) allergen

Isoflavone reductase-like proteins (IRLs) are enzymes with key roles in the metabolism of diverse flavonoids. Last identified olive pollen allergen (Ole e 12) is an IRL relevant for allergy amelioration, since it exhibits high prevalence among atopic patients. The goals of this study are the characterization of (A) the structural-functionality of Ole e 12 with a focus in its catalytic mechanism, and (B) its molecular allergenicity by extensive analysis using different molecular computer-aided approaches covering (1) physicochemical properties and functional-regulatory motifs, (2) sequence analysis, 2-D and 3D structural homology modeling comparative study and molecular docking, (3) conservational and evolutionary analysis, (4) catalytic mechanism modeling, and (5) sequence, structure-docking based B-cell epitopes prediction, while T-cell epitopes were predicted by inhibitory concentration and binding score methods. Structural-based detailed features, phylogenetic and sequences analysis have identified Ole e 12 as phenylcoumaran benzylic ether reductase. A catalytic mechanism has been proposed for Ole e 12 which display Lys133 as one of the conserved residues of the IRLs catalytic tetrad (Asn-Ser-Tyr-Lys). Structure characterization revealed a conserved protein folding among plants IRLs. However, sequence polymorphism significantly affected residues involved in the catalytic pocket structure and environment (cofactor and substrate interaction-recognition). It might also be responsible for IRLs isoforms functionality and regulation, since micro-heterogeneities affected physicochemical and posttranslational motifs. This polymorphism might have large implications for molecular differences in B- and T-cells epitopes of Ole e 12, and its identification may help designing strategies to improve the component-resolving diagnosis and immunotherapy of pollen and food allergy through development of molecular tools.

SOLUBLE METAL POOL AS AFFECTED BY SOIL ADDITION WITH ORGANIC INPUTS

The potential impact of diverse inputs of organic matter (hay, maize straw, and peat) on the mobility and bioavailability of Cd, Cu, Pb, and Zn was examined at laboratory scale for three soils with contrasting properties and for two moisture regimes: field capacity and saturated conditions. Soil solution was characterized for total soluble metals, dissolved soil organic carbon, and ultraviolet absorbance at 254 nm. Speciation analyses were performed with WHAM VI. For field capacity conditions, metal mobility increased (Pb>Cu>Zn>Cd) for all soils and treatments compared with controls and was significantly correlated (p<0.05) with dissolved organic matter (r=0.540). Solubilization of organic matter was mostly driven by Al mobilization (r=0.580, p<0.05) and variations in solution pH. The bioavailable pool of metals, estimated as free ion activities, decreased with the increasing occurrence of metal-organic matter complexes, which was accompanied by an increase in solution of highly aromatic organic matter. Soil saturation generally decreased metal mobility and the ratio of metal-organo matter complexes in solution. Consistently, such effects were accompanied by a decrease in the solubilization of organic matter and lower mobilization of Al, Fe, and Mn.

FTIR Analysis of Soil Organic Matter to Link the Turnover of Organic Inputs with Carbon Respiration Rates

Soil amended with different organic inputs or biochar types was analysed by Fourier transform infrared (FTIR) microscopy. Changes in the chemical composition were observed through variations in the spectra and were consistent with changes in carbon dioxide release. Biochar addition strongly decreased the concentration of polysaccharides which was well related to low rates of carbon respiration. Forest waste also induced a low increase on carbon respiration while preserving a high ratio of aromatic carbon in soil. Otherwise, soil amendment with maize straw increased carbon respiration circa ten times while reducing the signal of aromatic carbon. Overall, the results suggest that aromatic compounds and polysaccharides largely determine carbon respiration rates in soil.

Soil organic carbon stabilization: Mapping carbon speciation from intact microaggregates

The clearing of land for agricultural production depletes soil organic carbon (OC) reservoirs, yet despite their importance, the mechanisms by which C is stabilized in soils remain unclear. Using synchrotron-based infrared microspectroscopy, we have for the first time obtained in situ, laterally resolved data regarding the speciation of C within sections taken from intact free microaggregates from two contrasting soils (Vertisol and Oxisol, 0-20 cm depth) impacted upon by long-term (up to 79 y) agricultural production. There was no apparent gradient in the C concentration from the aggregate surface to the interior for any of the three forms of C examined (aliphatic C, aromatic C, and polysaccharide C). Rather, organo-mineral interactions were of critical importance in influencing overall C stability, particularly for aliphatic C, supporting the hypothesis that microaggregates form through organo-mineral interactions. However, long-term cropping substantially decreased the magnitude of the organo-mineral interactions for all three forms of C. Thus, although organo-mineral interactions are important for OC stability, C forms associated with the mineral phases are not entirely resistant to degradation. These results provide important insights into the underlying mechanisms by which microaggregates form and the factors influencing the persistence of OC in soils.