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Frontiers in Microbiology | 2017

Temporal Dynamics of Soil Microbial Communities below the Seedbed under Two Contrasting Tillage Regimes

Florine Degrune; Nicolas Theodorakopoulos; Gilles Colinet; Marie-Pierre Hiel; Bernard Bodson; Bernard Taminiau; Georges Daube; Micheline Vandenbol; Martin Hartmann

Agricultural productivity relies on a wide range of ecosystem services provided by the soil biota. Plowing is a fundamental component of conventional farming, but long-term detrimental effects such as soil erosion and loss of soil organic matter have been recognized. Moving towards more sustainable management practices such as reduced tillage or crop residue retention can reduce these detrimental effects, but will also influence structure and function of the soil microbiota with direct consequences for the associated ecosystem services. Although there is increasing evidence that different tillage regimes alter the soil microbiome, we have a limited understanding of the temporal dynamics of these effects. Here, we used high-throughput sequencing of bacterial and fungal ribosomal markers to explore changes in soil microbial community structure under two contrasting tillage regimes (conventional and reduced tillage) either with or without crop residue retention. Soil samples were collected over the growing season of two crops (Vicia faba and Triticum aestivum) below the seedbed (15–20 cm). Tillage, crop and growing stage were significant determinants of microbial community structure, but the impact of tillage showed only moderate temporal dependency. Whereas the tillage effect on soil bacteria showed some temporal dependency and became less strong at later growing stages, the tillage effect on soil fungi was more consistent over time. Crop residue retention had only a minor influence on the community. Six years after the conversion from conventional to reduced tillage, soil moisture contents and nutrient levels were significantly lower under reduced than under conventional tillage. These changes in edaphic properties were related to specific shifts in microbial community structure. Notably, bacterial groups featuring copiotrophic lifestyles or potentially carrying the ability to degrade more recalcitrant compounds were favored under conventional tillage, whereas taxa featuring more oligotrophic lifestyles were more abundant under reduced tillage. Our study found that, under the specific edaphic and climatic context of central Belgium, different tillage regimes created different ecological niches that select for different microbial lifestyles with potential consequences for the ecosystem services provided to the plants and their environment.


PeerJ | 2018

Impact of crop residue management on crop production and soil chemistry after seven years of crop rotation in temperate climate, loamy soils

Marie-Pierre Hiel; Sophie Barbieux; Claire Olivier; Guillaume Lobet; Christian Roisin; Sarah Garré; Gilles Colinet; Bernard Bodson; Benjamin Dumont

Society is increasingly demanding a more sustainable management of agro-ecosystems in a context of climate change and an ever growing global population. The fate of crop residues is one of the important management aspects under debate, since it represents an unneglectable quantity of organic matter which can be kept in or removed from the agro-ecosystem. The topic of residue management is not new, but the need for global conclusion on the impact of crop residue management on the agro-ecosystem linked to local pedo-climatic conditions has become apparent with an increasing amount of studies showing a diversity of conclusions. This study specifically focusses on temperate climate and loamy soil using a seven-year data set. Between 2008 and 2016, we compared four contrasting residue management strategies differing in the amount of crop residues returned to the soil (incorporation vs. exportation of residues) and in the type of tillage (reduced tillage (10 cm depth) vs. conventional tillage (ploughing at 25 cm depth)) in a field experiment. We assessed the impact of the crop residue management on crop production (three crops—winter wheat, faba bean and maize—cultivated over six cropping seasons), soil organic carbon content, nitrate (\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{upgreek} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} }{}


Agriculture, Ecosystems & Environment | 2016

No favorable effect of reduced tillage on microbial community diversity in a silty loam soil (Belgium)

Florine Degrune; Nicolas Theodorakopoulos; Marc Dufrêne; Gilles Colinet; Bernard Bodson; Marie-Pierre Hiel; Bernard Taminiau; Carine Nezer; Georges Daube; Micheline Vandenbol

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Soil & Tillage Research | 2017

Impact of tillage on greenhouse gas emissions by an agricultural crop and dynamics of N2O fluxes: Insights from automated closed chamber measurements

Margaux Lognoul; Nicolas Theodorakopoulos; Marie-Pierre Hiel; Donat Regaert; François Broux; Bernard Heinesch; Bernard Bodson; Micheline Vandenbol; Marc Aubinet

\end{document}NO3−), phosphorus (P) and potassium (K) soil content and uptake by the crops. The main differences came primarily from the tillage practice and less from the restitution or removal of residues. All years and crops combined, conventional tillage resulted in a yield advantage of 3.4% as compared to reduced tillage, which can be partly explained by a lower germination rate observed under reduced tillage, especially during drier years. On average, only small differences were observed for total organic carbon (TOC) content of the soil, but reduced tillage resulted in a very clear stratification of TOC and also of P and K content as compared to conventional tillage. We observed no effect of residue management on the \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{upgreek} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} }{}


European Journal of Agronomy | 2017

Impact of spatio-temporal shade dynamics on wheat growth and yield, perspectives for temperate agroforestry

Sidonie Artru; Sarah Garré; Christian Dupraz; Marie-Pierre Hiel; Céline Blitz-Frayet; Ludivine Lassois

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Agronomy for Sustainable Development | 2015

A novel sub-phylum method discriminates better the impact of crop management on soil microbial community

Florine Degrune; Marc Dufrêne; Gilles Colinet; Sébastien Massart; Bernard Taminiau; Bernard Bodson; Marie-Pierre Hiel; Georges Daube; Carine Nezer; Micheline Vandenbol

\end{document}NO3− content, since the effect of fertilization dominated the effect of residue management. To confirm the results and enhance early tendencies, we believe that the experiment should be followed up in the future to observe whether more consistent changes in the whole agro-ecosystem functioning are present on the long term when managing residues with contrasted strategies.


Biotechnologie, Agronomie, Société et Environnement | 2016

Crop residue management in arable cropping systems under a temperate climate. Part 2: Soil physical properties and crop production. A review

Marie-Pierre Hiel; Marie Chelin; Nargish Parvin; Sophie Barbieux; Florine Degrune; Aboulkacem Lemtiri; Gilles Colinet; Aurore Degré; Bernard Bodson; Sarah Garré


Biotechnologie, Agronomie, Société et Environnement | 2016

Crop residue management in arable cropping systems under temperate climate. Part 1: Soil biological and chemical (phosphorus and nitrogen) properties. A review

Aboulkacem Lemtiri; Florine Degrune; Sophie Barbieux; Marie-Pierre Hiel; Marie Chelin; Nargish Parvin; Micheline Vandenbol; Frédéric Francis; Gilles Colinet


Biotechnologie, Agronomie, Société et Environnement | 2016

Gestion des résidus de cultures dans les systèmes de grandes cultures sous climat tempéré. Partie 2 : Propriétés physiques du sol et production agricole (synthèse bibliographique)

Marie-Pierre Hiel; Marie Chelin; Nargish Parvin; Sophie Barbieux; Florine Degrune; Aboulkacem Lemtiri; Gilles Colinet; Aurore Degré; Bernard Bodson; Sarah Garré


Archive | 2017

10. 2. Le travail superficiel du sol, plutôt qu’un labour conventionnel, permet-il de réduire les émissions de N2O vers l’atmosphère ? Campagne sur un essai en froment d’hiver

François Broux; Margaux Lognoul; Nicolas Theodorakopoulos; Marie-Pierre Hiel; Bernard Bodson; Bernard Heinesch; Marc Aubinet

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