Mateusz M. Marzec

Model immunoassay on silicon surfaces: vertical and lateral nanostructure vs. protein coverage.

To provide complete characterization of immunoassay on silicon biosensor surfaces, atomic force microscopy, (angle-resolved) X-ray photoelectron spectroscopy and time-of-flight secondary ion mass spectrometry were applied to examine Si(3)N(4) surfaces modified with (3-aminopropyl)triethoxysilane, coated with gamma globulins (IgG), blocked with bovine serum albumin and then reacted with anti-IgG antibody for two complementary pairs (rabbit and mouse IgG) at various concentrations (from 0.3 nM to 330 nM). Protein coverage, as reflected in (amine to total N1s) XPS signal ratio and determined from ARXPS, decreases slightly due to blocking and then increases monotonically for anti-IgG antibody concentrations higher than 1 nM. AFM images reveal hardly any change of lateral nanostructure due to blocking but response to antibody solutions, based on both the mean size (from autocorrelation) and dominant spacing (from Fourier analysis) of surface features, similar to that given by ARXPS. AFM height histograms provided information about the vertical nanostructure and the parameters of height distribution (average height, spread - roughness and skewness) were distinctly influenced by coating, blocking and immunoreaction. Average protein layer thickness values determined based on protein structure (molecular weight, dimensions) and surface coverage provided from ARXPS were in accord with average height of protein layer determined from AFM. TOF-SIMS analysis indicated that BSA blocks free surface sites and in addition replaces some already adsorbed IgGs.

Direct Covalent Biomolecule Immobilization on Plasma-Nanotextured Chemically Stable Substrates

A new method for direct covalent immobilization of protein molecules (including antibodies) on organic polymers with plasma-induced random micronanoscale topography and stable-in-time chemical functionality is presented. This is achieved using a short (1-5 min) plasma etching and simultaneous micronanotexturing process, followed by a fast thermal annealing step, which induces accelerated hydrophobic recovery while preserving important chemical functionality created by the plasma. Surface-bound biomolecules resist harsh washing with sodium dodecyl sulfate and other detergents even at elevated temperatures, losing less than 40% of the biomolecules bound even at the harshest washing conditions. X-ray photoelectron spectroscopy, secondary-ion mass spectrometry, and electron paramagnetic resonance are used to unveil the chemical modification of the plasma-treated and stabilized surfaces. The nanotextured and chemically stabilized surfaces are used as substrates for the development of immunochemical assays for the sensitive detection of C-reactive protein and salmonella lipopolysaccharides through immobilization of the respective analyte-specific antibodies onto them. Such substrates are stable for a period of 1 year with ambient storage.

Effects of polythiophene surface structure on adsorption and conformation of bovine serum albumin: a multivariate and multitechnique study.

Protein interactions with surfaces of promising conducting polymers are critical for development of bioapplications. Surfaces of spin-cast and postbaked poly(3-alkylthiophenes), regiorandom P3BT, and regioregular RP3HT are examined prior to and after adsorption of model protein, bovine serum albumin, with time-of-flight secondary ion mass spectrometry, atomic force microscopy, and X-ray photoelectron spectroscopy. The multivariate method of principal component analysis applied to ToF-SIMS data maximizes information on subtle differences in surface chemistry: PCA reveals alkyl side chains and conjugated backbones, exposed for RP3HT and P3BT, respectively. Phase imaging AFM shows semicrystalline microstructure of RP3HT and amorphous morphology of P3BT films. A cellular-like pattern of proteins adsorbed on RP3HT develops with coverage to more uniform overlayer, observed always on P3BT. The amount of adsorbed protein, determined by XPS as a function of BSA concentration (up to 10 mg/mL), is ∼21% lower for RP3HT than P3BT (up to 1.1 mg/m(2)). Although PCA differentiates protein from polythiophene, relative protein surface composition evaluated from ToF-SIMS saturates rather than increases with amount of adsorbed BSA from XPS. This reflects ToF-SIMS sensitivity to outermost layer of proteins, enabling multivariate analysis of protein conformation or orientation. PCA distinguishes between amino acids characteristic for external regions of BSA adsorbed to P3BT and RP3HT. These amino acids are identified for P3BT and RP3HT as hydrophilic and hydrophobic, respectively, by relative hydrophobicity of amino acid side chains. Alternative identification with BSA domains fails, pointing to substrate-induced changes in conformation and degree of denaturation rather than orientation of adsorbed protein.

Temperature-Controlled Three-Stage Switching of Wetting, Morphology, and Protein Adsorption

The novel polymeric coatings of oligoperoxide-graft-poly(4-vinylpyridine-co-oligo(ethylene glycol)ethyl ether methacrylate246) [oligoperoxide-graft-P(4VP-co-OEGMA246)] attached to glass were successfully fabricated. The composition, thickness, morphology, and wettability of resulting coatings were analyzed using X-ray photoelectron spectroscopy, ellipsometry, atomic force microscopy, and contact angle measurements, respectively. In addition, adsorption of the bovine serum albumin was examined with fluorescence microscopy. The thermal response of wettability and morphology of the coatings followed by that of protein adsorption revealed two distinct transitions at 10 and 23 °C. For the first time, three stage switching was observed not only for surface wetting but also for morphology and protein adsorption. Moreover, the influence of the pH on thermo-sensitivity of modified surfaces was shown.

Temperature-responsive properties of poly(4-vinylpyridine) coatings: influence of temperature on the wettability, morphology, and protein adsorption

Although the pH-response of poly(vinylpyridine)-based systems is well-known and indeed used in several biomedical applications, the impact of temperature on the properties of this polymer has not been investigated in detail so far. Herein, we demonstrate the temperature-responsiveness and switchable wettability of two poly(4-vinylpyridine) coatings, mimicking the behavior of materials with lower critical solution temperature. The thermal response of P4VP spin-coated films, solvent cast on a glass, is weaker than that observed for P4VP-grafted brushes, fabricated via polymerization from an oligoperoxide grafted on an amino-silanized glass. Both the P4VP coatings exhibit a temperature dependence of the water contact angle with a well-defined transition at 13–14 °C. This transition is absent at acid pH levels wherein almost all pyridyl groups are protonated. The P4VP-grafted brushes were used to examine the impact of temperature on the surface morphology and protein adsorption. The coating surface, recorded with atomic force microscopy, evolved noticeably at alkaline pH, from being relatively smooth at 10 °C to structured and rough at 20 °C. In turn, at acid pH levels, flat surfaces with rare elevations were observed at both temperatures. The adsorption of bovine serum albumin and human fibrinogen was observed with fluorescence microscopy to be significantly more efficient for temperatures above the transition, indicating that P4VP coatings can act as a noteworthy switching material.

Transition between stable hydrophilization and fast etching/hydrophilization of poly(methyl)methacrylate polymer using a novel atmospheric pressure dielectric barrier discharge source

Tuning the transition between stable hydrophilicity and high etching-rate and simultaneous hydrophilization of polymethylmethacrylate (PMMA) films was achieved in an open-air environment simply by adjusting the O2 content in He gas injection through the showerhead-type electrode of a novel atmospheric pressure dielectric barrier discharge source. A comparative study was performed for He and He-O2 plasma treatment of PMMA. Electrical and optical measurements indicated severe alteration of plasma characteristics when O2 is added in gas feed. The enhancement of oxygen emission band intensities indicates an enhanced concentration of atomic oxygen, resulting in very high PMMA etching rates of ∼320 nm/min, ∼four times higher compared to pure He. In contrast, the He plasma showed higher nitrogen emission band intensities, translated into a higher nitrogen content on the PMMA surface according to x-ray photoelectron spectroscopy and time-of-flight secondary ion mass spectrometry. This enhanced nitrogen content du...

XPS depth profiling of organic photodetectors with the gas cluster ion beam

In this work, the authors study active layers of organic photodetector devices containing phenyl-C61-butyric acid methyl ester and Poly[(4,8-bis-(2-ethylhexyloxy)-benzo(1,2-b:4,5-b′)dithiophene)-2,6-diyl-alt-(4-(2-ethylhexanoyl)-thieno[3,4-b]thiophene-)-2-6-diyl)] (PBDTTT-C). Thin films are examined by x-ray photoemission spectroscopy coupled with argon gas cluster ion sputtering. The use of massive cluster projectiles instead of monoatomic ions has the advantage of not destroying the chemical structure of organic materials under study. The authors show how simulated aging influences the chemistry of these blends and how these alterations extend from sample surface into the bulk of the film. The authors identify several possible processes resulting from aging, including C=O bond breakage and PBDTTT-C diffusion.

Chemical stability of polymers under argon gas cluster ion beam and x-ray irradiation

In this work, the authors examine chemical stability of polymers under x-ray photoemission spectroscopy (XPS) depth profiling coupled with argon gas cluster ion sputtering. The depth profiles measured for polystyrene, poly(3-dodecylthiophene), and poly(methyl methacrylate) thin films do not reveal changes in the XPS spectra due to cluster bombardment. Nevertheless, x-ray irradiation influences the shape of the sputter craters. The observed features are attributed to cross-linking or chain scission occurring in the polymers.

Tuning of the Seebeck Coefficient and the Electrical and Thermal Conductivity of Hybrid Materials Based on Polypyrrole and Bismuth Nanowires

The growing demand for clean energy catalyzes the development of new devices capable of generating electricity from renewable energy resources. One of the possible approaches focuses on the use of thermoelectric materials (TE), which may utilize waste heat, water, and solar thermal energy to generate electrical power. An improvement of the performance of such devices may be achieved through the development of composites made of an organic matrix filled with nanostructured thermoelectric materials working in a synergetic way. The first step towards such designs requires a better understanding of the fundamental interactions between available materials. In this paper, this matter is investigated and the questions regarding the change of electrical and thermal properties of nanocomposites based on low-conductive polypyrrole enriched with bismuth nanowires of well-defined geometry and morphology is answered. It is clearly demonstrated that the electrical conductivity and the Seebeck coefficient may be tuned either simultaneously or separately within particular Bi NWs content ranges, and that both parameters may be increased at the same time.

Intelligent Predictive Maintenance System

The machine learning techniques can be efficiently used for optimal maintenance decision making. Currently, most of the companies and manufactures possess huge amounts of sensor, process, and environment data. Combining the data with the information about the failures succeeds in creating useful train data sets for predictive maintenance purposes. In this paper, we propose the approach of efficient data processing in order to maximize the predictive quality of machine learning models. We investigate numerous machine-learning methods and propose the procedure to automatize the predictive maintenance process. The results obtained for the real data were satisfactory and applicable.