Mathias Hofmann

Comparative direct infusion ion mobility mass spectrometry profiling of Thermus thermophilus wild-type and mutant cruC carotenoid extracts

AbstractThe major carotenoid species isolated from the thermophilic bacterium Thermus thermophilus HB27 have been identified as zeaxanthin–glucoside–fatty acid esters (thermozeaxanthins and thermobiszeaxanthins). Most of the genes of the proposed T. thermophilus carotenoid pathway could be found in the genome, but there is less clarity about the genes which encode the enzymes performing the final carotenoid glycosylation and acylation steps. To get a further insight into the biosynthesis of thermo(bis)zeaxanthins in T. thermophilus, we deleted the megaplasmid open reading frame TT_P0062 (termed cruC) by both exchanging it with a kanamycin resistance cassette (ΔcruC:kat) and by generating a markerless gene deletion strain (ΔcruC). A fast and efficient electrospray ionization–ion mobility–time-of-flight mass spectrometry method via direct infusion was developed to compare the carotenoid profiles of wild type and mutant T. thermophilus cell culture extracts. These comparisons revealed significant alterations in the carotenoid composition of the ΔcruC mutant, which was found to accumulate zeaxanthin. This is the first experimental evidence that the ORF encodes the glycosyltransferase enzyme necessary for the glycosylation of zeaxanthin in the final modification steps of the thermozeaxanthin biosynthesis in T. thermophilus HB27. Also, the proposed method for direct determination of carotenoid amounts and species in crude acetone extracts represents an improvement over existing methods in terms of speed and sensitivity and may be applicable in high-throughput analyses of other terpenoids as well as other important bacterial metabolites like fatty acids and their derivatives. Figureᅟ

Predicting tree preferences from visible tree characteristics

This paper presents a psychological perspective to the selection of trees for urban residential areas. Sixty tree species suitable for urban planting sites were rated by lay participants regarding preference. We then used outward tree features to predict the preference ratings. Twenty-five different plant characteristics served as possible predictors in a regression model for tree preference. We found that the distinction between conifers and deciduous trees, the maximum tree height, and the crown height-to-width ratio were valuable predictors for preference, explaining more than 70% of the variance. This adds support for evolutionary theories of landscape preference. The regression model presented in this paper can be applied to calculate a preference estimate for other tree species using their known physical data, which may facilitate tree selection tasks in green space planning. By specifying preference-relevant tree characteristics, our findings may also inform the process of selecting diverse species for sites where a homogenous overall appearance is a planning goal.

Contrasting strategies for tree species to cope with heat and dry conditions at urban sites

Street trees planted at tree pits with impermeable pavements are exposed to a high level of both, atmospheric and edaphic stress. For many species tree physiology, optimal growth, and consequently long-term vitality may be hampered under these harsh conditions. Therefore, maintaining the vitality and promoting the ecosystem services provided by urban trees, for example aesthetic values and microclimatic benefits, it is important to establish trees with a high tolerance to stressful urban environments. Measurements of leaf gas exchange, leaf water potential, leaf surface temperature and chlorophyll-fluorescence were used for identification of specific response of Corylus corluna L., Ginkgo biloba L., Liriodendron tulipifera L., and Tilia cordata Mill. ‘Greenspire’. The summer months in 2013 with a period of heat and drought over eight weeks only interrupted by two rainy days were appropriate to access tree’s strategies to cope with low water availability. During the measurement period, the influence of high temperatures, high values of vapor pressure deficit (VPD) and low soil water availability on stomatal conductance, water-use efficiency (WUE) and leaf water potential (Ψmin, Ψmax ) was highest for Liriodendron followed by Ginkgo. These species showed high reductions in WUE in case of higher air temperatures and high values of VPD. Results indicate an avoidance strategy under increasing heat and VPD. In contrast, Corylus and Tilia followed a tolerance strategy indicated by decreasing values of Ψmin and lower reductions of WUE. In conclusion, wide species-specific variation in response to high temperatures and high VPD indicates that substantial potential exists in the selection for dry and hot urban places.

Contact to Nature Benefits Health: Mixed Effectiveness of Different Mechanisms

How can urban nature contribute to the reduction of chronic stress? We twice measured the concentration of the “stress hormone” cortisol in the hair of 85 volunteer gardeners (six months apart), relating cortisol level change to (self-reported) characteristics of their recreational activities. Both time spent in nature and physical activity led to decreases in cortisol, while time spent being idle led to an increase. At high levels of present stressors, however, the relationship for time spent in nature and for idleness was reversed. Time spent with social interaction had no effect on cortisol levels. Our results indicate that physical activity is an effective means of mitigating the negative effects of chronic stress. The results regarding the time spent in nature and time spent being idle are less conclusive, suggesting the need for more research. We conclude that if chronic stress cannot be abolished by eradicating its sources, public health may take to measures to reduce it—providing urban nature being one effective possibility.

Human Perception of Urban Environment and Consequences for its Design

In psychology, there is converging empirical evidence that it is necessary to differentiate between objective and subjective attributes of the environment and to take into account accompanying processes of perception and evaluation in examining the way humans interact with the environment. Amerigo (1990) and Amerigo and Aragones (1997) proposed a conceptual framework to reflect residential satisfaction. We argue in favor of a much broader scope to this approach, namely studying the dynamic interaction between individuals and their residential environment, and analyzing the cognitive, affective and behavioral processes taking place in this interaction. The main tenets of this idea are illustrated in Fig. 11.1.