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Dive into the research topics where Matthew F.L. Parker is active.

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Featured researches published by Matthew F.L. Parker.


Journal of the American Chemical Society | 2009

Experimental evidence for water mediated electron transfer through bis-amino acid donor-bridge-acceptor oligomers.

Subhasis Chakrabarti; Matthew F.L. Parker; Christopher W. Morgan; Christian E. Schafmeister; David H. Waldeck

This work compares the photoinduced unimolecular electron transfer rate constants for two different solute molecules (D-SSS-A and D-SRR-A) in water and DMSO solvents. The D-SSS-A solute has a cleft between the electron donor and acceptor units, which is able to contain a water molecule but is too small for DMSO. The rate constant for D-SSS-A in water is significantly higher than that for D-SRR-A, which lacks a cleft, and significantly higher for either solute in DMSO. The enhancement of the rate constant is explained by an electron tunneling pathway that involves water molecule(s).


Journal of the American Chemical Society | 2014

Acceleration of an aromatic Claisen rearrangement via a designed spiroligozyme catalyst that mimics the ketosteroid isomerase catalytic dyad.

Matthew F.L. Parker; Sílvia Osuna; Guillaume Bollot; Shivaiah Vaddypally; Michael J. Zdilla; K. N. Houk; Christian E. Schafmeister

A series of hydrogen-bonding catalysts have been designed for the aromatic Claisen rearrangement of a 1,1-dimethylallyl coumarin. These catalysts were designed as mimics of the two-point hydrogen-bonding interaction present in ketosteroid isomerase that has been proposed to stabilize a developing negative charge on the ether oxygen in the migration of the double bond.1 Two hydrogen bond donating groups, a phenol alcohol and a carboxylic acid, were grafted onto a conformationally restrained spirocyclic scaffold, and together they enhance the rate of the Claisen rearrangement by a factor of 58 over the background reaction. Theoretical calculations correctly predict the most active catalyst and suggest that both preorganization and favorable interactions with the transition state of the reaction are responsible for the observed rate enhancement.


Clinical Cancer Research | 2017

Non-invasive measurement of mTORC1 signaling with 89Zr-transferrin.

Charles Truillet; John T. Cunningham; Matthew F.L. Parker; Loc T. Huynh; Crystal S. Conn; Davide Ruggero; Jason S. Lewis; Michael J. Evans

Purpose: mTOR regulates many normal physiological processes and when hyperactive can drive numerous cancers and human diseases. However, it is very challenging to detect and quantify mTOR signaling noninvasively in clinically relevant animal models of disease or man. We hypothesized that a nuclear imaging tool measuring intracellular mTOR activity could address this unmet need. Experimental Design: Although the biochemical activity of mTOR is not directly amenable to nuclear imaging probe development, we show that the transferrin receptor can be used to indirectly measure intracellular changes in mTOR activity. Results: After verifying that the uptake of radiolabeled transferrin (the soluble ligand of the transferrin receptor) is stimulated by active mTORC1 in vitro, we showed that 89Zr-labeled transferrin (Tf) can measure mTORC1 signaling dynamics in normal and cancerous mouse tissues with PET. Finally, we show that 89Zr-Tf can detect the upregulation of mTORC1 by tumor cells to escape the antitumor effects of a standard-of-care antiandrogen, which is to our knowledge the first example of applying PET to interrogate the biology of treatment resistant cancer. Conclusions: In summary, we have developed the first quantitative assay to provide a comprehensive measurement of mTOR signaling dynamics in vivo, in specific normal tissues, and during tumor development in genetically engineered animal models using a nuclear imaging tool that is readily translatable to man. Clin Cancer Res; 23(12); 3045–52. ©2016 AACR.


Bioconjugate Chemistry | 2017

Imaging PD-L1 Expression with ImmunoPET

Charles Truillet; Hseuh Ling J. Oh; Siok Ping Yeo; Chia Yin Lee; Loc T. Huynh; Junnian Wei; Matthew F.L. Parker; Collin M. Blakely; Natalia Sevillano; Yung-hua Wang; Yuqin S. Shen; Victor Olivas; Khaled M. Jami; Anna Moroz; Benoit Jego; Emilie Jaumain; Lawrence Fong; Charles S. Craik; Albert J Chang; Trever G. Bivona; Cheng-I Wang; Michael J. Evans

High sensitivity imaging tools could provide a more holistic view of target antigen expression to improve the identification of patients who might benefit from cancer immunotherapy. We developed for immunoPET a novel recombinant human IgG1 (termed C4) that potently binds an extracellular epitope on human and mouse PD-L1 and radiolabeled the antibody with zirconium-89. Small animal PET/CT studies showed that 89Zr-C4 detected antigen levels on a patient derived xenograft (PDX) established from a non-small-cell lung cancer (NSCLC) patient before an 8-month response to anti-PD-1 and anti-CTLA4 therapy. Importantly, the concentration of antigen is beneath the detection limit of previously developed anti-PD-L1 radiotracers, including radiolabeled atezolizumab. We also show that 89Zr-C4 can specifically detect antigen in human NSCLC and prostate cancer models endogenously expressing a broad range of PD-L1. 89Zr-C4 detects mouse PD-L1 expression changes in immunocompetent mice, suggesting that endogenous PD-1/2 will not confound human imaging. Lastly, we found that 89Zr-C4 could detect acute changes in tumor expression of PD-L1 due to standard of care chemotherapies. In summary, we present evidence that low levels of PD-L1 in clinically relevant cancer models can be imaged with immunoPET using a novel recombinant human antibody.


Journal of Physical Chemistry A | 2016

Through-Solvent Tunneling in Donor–Bridge–Acceptor Molecules Containing a Molecular Cleft

Brittney M. Graff; Daniel N. Lamont; Matthew F.L. Parker; Brian P. Bloom; Christian E. Schafmeister; David H. Waldeck

Photoinduced electron transfer is used to investigate the solvent-mediated electron tunneling between electron donor and acceptor groups in polar solvents. Bis-peptide scaffolds are used to control the spatial positioning of electron donor and acceptor groups and create a molecular cleft. The photoinduced electron transfer is studied for two different cleft sizes, and the electronic coupling is found to be controlled by the nature of the solvent and the ability of the molecular cleft to accommodate it, as well as interact directly with it. These studies demonstrate the importance of electron tunneling through nonbonded contacts and reveal a strategy for examining such tunneling pathways in polar solvents.


Molecular Cancer Research | 2017

Real-Time Transferrin-Based PET Detects MYC-Positive Prostate Cancer

Rahul Aggarwal; Spencer C. Behr; Pamela L. Paris; Charles Truillet; Matthew F.L. Parker; Loc T. Huynh; Junnian Wei; Byron Hann; Jack F. Youngren; Jiaoti Huang; Gayatri Premasekharan; Nimna Ranatunga; Emily Chang; Kenneth T. Gao; Charles J. Ryan; Eric J. Small; Michael J. Evans

Noninvasive biomarkers that detect the activity of important oncogenic drivers could significantly improve cancer diagnosis and management of treatment. The goal of this study was to determine whether 68Ga-citrate (which avidly binds to circulating transferrin) can detect MYC-positive prostate cancer tumors, as the transferrin receptor is a direct MYC target gene. PET imaging paired with 68Ga-citrate and molecular analysis of preclinical models, human cell-free DNA (cfDNA), and clinical biopsies were conducted to determine whether 68Ga-citrate can detect MYC-positive prostate cancer. Importantly, 68Ga-citrate detected human prostate cancer models in a MYC-dependent fashion. In patients with castration-resistant prostate cancer, analysis of cfDNA revealed that all patients with 68Ga-citrate avid tumors had a gain of at least one MYC copy number. Moreover, biopsy of two PET avid metastases showed molecular or histologic features characteristic of MYC hyperactivity. These data demonstrate that 68Ga-citrate targets prostate cancer tumors with MYC hyperactivity. A larger prospective study is ongoing to demonstrate the specificity of 68Ga-citrate for tumors with hyperactive MYC. Implications: Noninvasive measurement of MYC activity with quantitative imaging modalities could substantially increase our understanding of the role of MYC signaling in clinical settings for which invasive techniques are challenging to implement or do not characterize the biology of all tumors in a patient. Moreover, measuring MYC activity noninvasively opens the opportunity to study changes in MYC signaling in patients under targeted therapeutic conditions thought to indirectly inhibit MYC. Mol Cancer Res; 15(9); 1221–9. ©2017 AACR.


ACS Infectious Diseases | 2018

[11C]Para-Aminobenzoic Acid: A Positron Emission Tomography Tracer Targeting Bacteria-Specific Metabolism

Christopher A. Mutch; Alvaro A. Ordonez; Hecong Qin; Matthew F.L. Parker; Lauren E. Bambarger; Javier Villanueva-Meyer; Joseph Blecha; Valerie Carroll; Céline Taglang; Robert R. Flavell; Renuka Sriram; Henry F. VanBrocklin; Oren S. Rosenberg; Michael A. Ohliger; Sanjay K. Jain; Kiel D. Neumann; David M. Wilson

Imaging studies are frequently used to support the clinical diagnosis of infection. These techniques include computed tomography (CT) and magnetic resonance imaging (MRI) for structural information and single photon emission computed tomography (SPECT) or positron emission tomography (PET) for metabolic data. However, frequently, there is significant overlap in the imaging appearance of infectious and noninfectious entities using these tools. To address this concern, recent approaches have targeted bacteria-specific metabolic pathways. For example, radiolabeled sugars derived from sorbitol and maltose have been investigated as PET radiotracers, since these are efficiently incorporated into bacteria but are poor substrates for mammalian cells. We have previously shown that para-aminobenzoic acid (PABA) is an excellent candidate for development as a bacteria-specific imaging tracer as it is rapidly accumulated by a wide range of pathogenic bacteria, including metabolically quiescent bacteria and clinical strains, but not by mammalian cells. Therefore, in this study, we developed an efficient radiosynthesis for [11C]PABA, investigated its accumulation into Escherichia coli and Staphylococcus aureus laboratory strains in vitro, and showed that it can distinguish between infection and sterile inflammation in a murine model of acute bacterial infection.


Oncotarget | 2018

Measuring glucocorticoid receptor expression in vivo with PET

Charles Truillet; Matthew F.L. Parker; Loc T. Huynh; Junnian Wei; Khaled M. Jami; Yung-hua Wang; Yuqin S. Shen; Renuka Sriram; David M. Wilson; John Kurhanewicz; Michael J. Evans

The glucocorticoid receptor (GR) is an emerging drug target for several common and deadly solid tumors like breast and prostate cancer, and clinical trials studying the antitumor effects of GR antagonists are beginning. Since GR expression can be variable in tumor cells, and virtually all normal mammalian tissues express some GR, we hypothesized that an imaging tool capable of detecting GR positive tumors and/or measuring GR occupancy by drug in tumor and normal tissues could improve the precision application of anti-GR therapies in the clinic. To this end, we developed a fluorine-18 labeled corticosteroid termed GR02 that potently binds the endogenous ligand binding pocket on full length GR. Binding of 18F-GR02 was suppressed in many normal tissues by co-treatment with mifepristone, a GR antagonist in human use, and was elevated in many normal tissues among mice lacking circulating corticosteroids due to adrenalectomy. 18F-GR02 also accumulated in GR positive subcutaneous and subrenal capsule prostate cancer models, and uptake in tumors was competed by mifepristone. Combined with a straightforward and high yielding radiosynthesis, these data establish the foundation for near-term clinical translation of 18F-GR02.


Journal of the American Chemical Society | 2012

Spiroligozymes for transesterifications: design and relationship of structure to activity.

Mahboubeh Kheirabadi; Nihan Çelebi-Ölçüm; Matthew F.L. Parker; Qingquan Zhao; Gert Kiss; K. N. Houk; Christian E. Schafmeister


Tetrahedron Letters | 2016

An improved, scalable synthesis of bis-amino acids

Jae Eun Cheong; Conrad T. Pfeiffer; Justin D. Northrup; Matthew F.L. Parker; Christian E. Schafmeister

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Loc T. Huynh

University of California

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Junnian Wei

University of California

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