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Dive into the research topics where Matthew J. Callow is active.

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Featured researches published by Matthew J. Callow.


Journal of Biological Chemistry | 1995

Site-specific Mutagenesis Demonstrates That Cysteine 4326 of Apolipoprotein B Is Required for Covalent Linkage with Apolipoprotein(a) in Vivo

Matthew J. Callow; Edward M. Rubin

In the formation of the lipoprotein(a) (Lp(a)) particle, apolipoprotein(a) (apo(a)) and apolipoprotein B (apoB) are covalently linked via a disulfide bond in both humans and human-apo(a)/apoB transgenic mice. Studies based upon fluorescent labeling of free cysteine residues have suggested that cysteine 3734 of the 4 carboxyl-terminal cysteines of apoB (Cys-3734, Cys-3890, Cys-4190, and Cys-4326) is the most likely candidate to form a disulfide bond with apo(a). However, other recent studies using truncated apoB molecules suggest that Cys-4326, the terminal cysteine of apoB, may be implicated in the binding to apo(a). In order to definitively show which of apoBs carboxyl-terminal cysteines is essential in interacting with apo(a) we have used RecA-assisted restriction enzyme digestion coupled with site-specific mutagenesis to convert Cys-3734 and Cys-4326 to serine within separate 90-kilobase pair apoB P1 phagemid clones. Transgenic mice containing the normal or mutated apoB transgenes were created, and the covalent association of mutated apoB with apo(a) was assessed in mice transgenic for both apoB and apo(a). Analysis by ultracentrifugation and immunoblotting revealed that Cys-4326, but not Cys-3734, was essential in the formation of the covalent bond between apo(a) and apoB in vivo.


Current Opinion in Lipidology | 2002

Expression profiling and comparative sequence derived insights into lipid metabolism

Matthew J. Callow; Edward M. Rubin

Expression profiling and genomic DNA sequence comparisons are increasingly being applied to the identification and analysis of the genes that are involved in lipid metabolism. Not only has genome-wide expression profiling aided in the identification of novel genes that are involved in important processes in lipid metabolism such as sterol efflux, but also the utilization of information from these studies has added to our understanding of the regulation of pathways that participate in the process. Coupled with these gene expression studies, cross-species comparison (a technique used to search for sequences that are conserved through evolution) has proven to be a powerful tool to identify important noncoding regulatory sequences and novel genes that are relevant to lipid biology. An example of the value of this approach was the recent chance discovery of a new apolipoprotein gene (that which encodes apolipoprotein AV) that has dramatic effects on triglyceride metabolism in mice and humans.


Statistica Sinica | 2002

STATISTICAL METHODS FOR IDENTIFYING DIFFERENTIALLY EXPRESSED GENES IN REPLICATED cDNA MICROARRAY EXPERIMENTS

Sandrine Dudoit; Y ee Hwa Yang; Matthew J. Callow; Terence P. Speed


Genome Research | 2000

Microarray Expression Profiling Identifies Genes with Altered Expression in HDL-Deficient Mice

Matthew J. Callow; Sandrine Dudoit; Elaine L. Gong; Terence P. Speed; Edward M. Rubin


Archive | 2006

Single Molecule Arrays for Genetic and Chemical Analysis

Radoje T. Drmanac; Matthew J. Callow; Snezana Drmanac; Brian K. Hauser; George Yeung


Archive | 2007

High throughput genome sequencing on DNA arrays

Radoje T. Drmanac; Matthew J. Callow; Snezana Drmanac


Archive | 2007

Efficient arrays of amplified polynucleotides

Radoje T. Drmanac; Matthew J. Callow


Archive | 2003

Universal selective genome amplification and universal genotyping system

Matthew J. Callow; Radoje T. Drmanac; Snezana Drmanac


Nucleic Acids Research | 2004

Selective DNA amplification from complex genomes using universal double‐sided adapters

Matthew J. Callow; Snezana Drmanac; Radoje Drmanac


Archive | 2009

Nucleic acid sequencing and process

Radoje T. Drmanac; Matthew J. Callow

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Snezana Drmanac

Argonne National Laboratory

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Terence P. Speed

Walter and Eliza Hall Institute of Medical Research

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Elaine L. Gong

University of California

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Lance J. Ferrin

National Institutes of Health

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Radoje Drmanac

Argonne National Laboratory

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