Megumi Nakagawa

Effects of aquatic macrophytes on water quality and phytoplankton communities in shallow lakes

We investigated aquatic macrophytes, water quality, and phytoplankton biomass and species composition in three shallow lakes with different levels of vegetation cover and nutrient concentration in Kushiro Moor, during August 2000. Trapa japonica can live in a wide range of nutrient levels. This species forms an environment with a steeper extinction of light, higher concentrations of dissolved organic carbon (DOC), lower concentrations of dissolved oxygen (DO) near the bottom, and lower concentrations of nitrate + nitrite and soluble reactive phosphorus (SRP) than other vegetation types. The pH was much higher in a Polygonum amphibium community, and the DO near the bottom did not decrease compared to a T. japonica community in the summer. The relationship between chlorophyll a and the limiting nutrient (total phosphorus (TP) when total nitrogen (TN) : TP is ≥10 and TN/10 when TN : TP is <10) significantly differed between lakes with and without submerged vegetation. The chlorophyll a concentrations at a given nutrient level were significantly lower in water with submerged macrophytes than in water without them. Correspondence analysis showed that the difference in phytoplankton community structure across sites was largely due to the presence or absence of submerged macrophytes, and the ordination of phytoplankton species in the lakes with submerged macrophytes is best explained by environmental gradients of TN, chlorophyll, pH and SRP.

Environmental gradients determining the distribution of benthic macroinvertebrates in Lake Takkobu, Kushiro wetland, northern Japan

Effects of environmental variables on the distribution of benthic macroinvertebrates inhabiting sediments were studied at 25 sites along the shoreline of Lake Takkobu in the Kushiro wetland of northern Japan in summer 2003. During the last decade, the lake’s status has undergone a drastic shift from clear water dominated by submerged macrophytes to turbid water dominated by phytoplankton. The canonical correspondence analysis showed that four environmental variables explained the significant variation in the macroinvertebrate species composition: submerged plant biomass, bottom sediment organic matter content (OMC), distance from the mouth of the Takkobu River, and bottom-layer pH. Five species of Chironomidae [Chironomus sp. (except plumosus group), Psectrocladius sp., Corynoneura sp., Parachironomus sp. arcuatus group, and Zavreliella sp.] occurred in sites with relatively lower pH and a high submerged plant biomass, whereas three species of Tubificidae (Tubifex tubifex, Aulodriluslimnobius and Aulodrilus sp.) and two of Chironomidae (Nanocladius sp. and Monodiamesa sp.) occurred in sites with high pH and little vegetation. The three Tubificidae species also preferred organic-rich sediments. Irrespective of aquatic vegetation, Sphaerium sp. (Bivalvia) and Monodiamesa sp. (Chironomidae) occurred in low-OMC sites, whereas Tanypus sp. (Chironomidae) preferred high-OMC sites. The number of macroinvertebrate taxa showed the highest correlation with the number of submerged plants, suggesting that macroinvertebrate species richness was related mostly to submerged plant species diversity in this lake. The quantity and species richness of submerged plants and OMC are thus important determinants of the community structure of macroinvertebrates inhabiting sediments in Lake Takkobu.

Effects of pond draining on biodiversity and water quality of farm ponds.

Farm ponds have high conservation value because they contribute significantly to regional biodiversity and ecosystem services. In Japan pond draining is a traditional management method that is widely believed to improve water quality and eradicate invasive fish. In addition, fishing by means of pond draining has significant cultural value for local people, serving as a social event. However, there is a widespread belief that pond draining reduces freshwater biodiversity through the extirpation of aquatic animals, but scientific evaluation of the effectiveness of pond draining is lacking. We conducted a large-scale field study to evaluate the effects of pond draining on invasive animal control, water quality, and aquatic biodiversity relative to different pond-management practices, pond physicochemistry, and surrounding land use. The results of boosted regression-tree models and analyses of similarity showed that pond draining had little effect on invasive fish control, water quality, or aquatic biodiversity. Draining even facilitated the colonization of farm ponds by invasive red swamp crayfish (Procambarus clarkii), which in turn may have detrimental effects on the biodiversity and water quality of farm ponds. Our results highlight the need for reconsidering current pond management and developing management plans with respect to multifunctionality of such ponds. Efectos del Drenado de Estanques sobre la Biodiversidad y la Calidad del Agua en Estanques de Cultivo.

Phytoplankton species abundance in Lake Kasumigaura (Japan) monitored monthly or biweekly since 1978

This data paper reports the abundance of phytoplankton species in monthly or biweekly samples collected from May 1978 through March 2010 at two stations on Lake Kasumigaura, a shallow lake that is the second-largest lake in Japan. The data set of quantitatively over several decades is unique among the available published data papers concerning lakes or plankton and continues to be freely available. The monitoring has been performed as a component of the Lake Kasumigaura Long-term Environmental Monitoring program, conducted by the National Institute for Environmental Studies since 1977. The data set details 173 phytoplankton species (or taxa), which can be identified by using an optical microscope and records their abundance. The abundance of each species is expressed in units of volume (μm3) per milliliter of lake water. This approach allows quantitative comparisons among taxa because the cell size of phytoplankton varies by several orders of magnitude among taxa. The phytoplankton data include 39 species (taxa) of Cyanophyta, 67 Chlorophyceae (Chlorophyta), 3 Prasinophyceae (Chlorophyta), 1 Raphidophyceae (Heterokontophyta), 6 Euglenophyceae (Euglenozoa), 4 Dinophyceae (Dinophyta), 38 Bacillariophyceae (Heterokontophyta), 6 Chrysophyceae (Heterokontophyta), 7 Xanthophyceae (Heterokontophyta), 1 Cryptophyceae (Cryptophyta) and 1 Prymnesiophyceae (Haptophyta). The data have been used for ecological and environmental studies and for studies on lake management.

Environmental and biotic characteristics to discriminate farm ponds with and without exotic largemouth bass and bluegill in western Japan

We compared the environmental and biotic characteristics of farm ponds with and without the invasive fish, largemouth bass (Micropterus salmoides), and bluegill (Lepomis macrochirus), with varying degrees of aquatic vegetation cover in western Japan. Redundancy analysis (RDA) revealed that aquatic vegetation cover and pond area were significant environmental variables in explaining the variance in aquatic organisms. Aquatic vegetation cover predominantly affected Odonata and Hemiptera larvae, and the native cyprinid, Hemigrammocypris rasborella, while the pond area mainly affected the two exotic fishes (largemouth bass and bluegill), Viviparidae, Oligocheata, Ephemeroptera, and chironomid larvae. In the RDA biplot for aquatic organisms, the RDA1 axis appeared to separate the exotic fish group (bluegill, largemouth bass, Gammaridae, Oligochaeta, Viviparidae, Ephemeroptera, Trichoptera, and chironomid larvae) from the native fish group (H. rasborella, Oryzias latipes, Rhinogobius sp., Odonata, shrimps, and Hemiptera larvae). The best path model results indicated that the presence of piscivorous largemouth bass had a significantly negative effect on native fish numbers; largemouth bass also had a positive indirect effect on benthic organism numbers. Our data suggest that the depletion of native fishes via top-down effects by exotic largemouth bass may indirectly increase the number of benthic organisms as a result of trophic-cascading effects.

The densities of bacteria, picophytoplankton, heterotrophic nanoflagellates and ciliates in Lake Kasumigaura (Japan) monitored monthly since 1996

This data paper describes the densities of the bacterioplankton, picocyanobacteria, eukaryotic picoplankton, heterotrophic nanoflagellates and ciliates in the water of Lake Kasumigaura—a shallow, eutrophic lake that is the second largest in Japan. All of these planktonic organisms are components of a microbial loop and are countable using an epifluorescence microscope. These data represent the results of monthly collections from April 1996 through March 2010 at two sites on the lake, and this data set is unique among the available published data papers concerning lakes or plankton and continues to be freely available. The monitoring was performed as a component of the Lake Kasumigaura Long-term Environmental Monitoring program conducted by National Institute for Environmental Studies since 1977 and includes water quality, plankton, and benthos. The data have been used for ecological studies and for studies on the management of water quality.

DNA barcoding of freshwater zooplankton in Lake Kasumigaura, Japan

Although DNA barcoding is a promising tool for the identification of organisms, it requires the development of a specific reference sequence library for sample application. In the present study we developed a Lake Kasumigaura, Japan, zooplankton DNA barcode library to increase the sensitivity of future zooplankton monitoring for detecting lake ecosystem condition changes. Specifically, the mitochondrial cytochrome c oxidase subunit I (mtCOI) haplotype, i.e., the primary DNA barcode, was examined for each zooplankton taxon. In crustaceans, 37 mtCOI haplotypes were obtained from 99 individuals, representing four and 15 morpho-species of Copepoda and Cladocera, respectively. Comparing these sequences with those in GenBank shows that the lake harbors putative non-indigenous species, such as Daphnia ambigua. In rotifers, 132 mtCOI haplotypes were obtained from 302 individuals, representing 11 genera and one unclassified taxon. The automatic barcode gap discovery (ABGD) algorithm separated these haplotypes into 43 species. Brachionus cf. calyciflorus was divided into five ABGD species, and different ABGD species tended to occur in different seasons. Seasonal ABGD-species succession was also observed within Polyarthra spp. and Synchaeta spp. These seasonal successions were not detected by inspections of external morphology alone. Accepting up to 7% sequence divergence within the same species, mtCOI reference sequences were available in GenBank for three, 13, and 17 species in Copepoda, Cladocera, and Rotifera, respectively. The present results, therefore, reveal the serious shortage of mtCOI reference sequences for rotifers, and underscore the urgency of developing rotifer mtCOI barcode libraries on a global scale.

The Effects of Filter-Feeding Planktivorous Fish on Production of Protozoa and Carbon Flow from Protozoa to Zooplankton in a Eutrophic Lake

ABSTRACT Enclosure experiments were performed in a eutrophic lake in order to evaluate the effects of filter-feeding fish (silver carp) on production of planktonic protozoa and the carbon flux from protozoa to zooplankton. The densities of heterotrophic nanoflagellates (HNF) and ciliates (<60 μm) increased when fish were introduced to enclosures, and then decreased after the fish were removed. The increased densities of the protozoan resulted from relaxed feeding pressure by crustaceans and rotifers, both of which were suppressed by the fish. The growth rates of HNF were not significantly different in fishless enclosures and in enclosures with fish. The growth rates were positively correlated with water temperature (p<0.05). Similarly, ciliate growth rates were not significantly different between the two enclosures, but they were not significantly correlated with any environmental variables. Grazing rates on HNF by zooplankton were significantly higher in fishless enclosures than those in enclosures with fish. The HNF were grazed more heavily by the 10–94 um predators than by those >94 μm. Grazing rates on ciliates were not different between treatments or between the two size groups of predators. Estimates of the ratio of zooplankton grazing rate on protozoan to zooplankton ingestion rate, indicated that both HNF and ciliates were more important food sources for zooplankton in enclosures with fish than in fishless enclosures. In the presence of fish, zooplankton depended almost exclusively on HNF for food, but in the absence of fish, zooplankton feeding shifted to phytoplankton. The introduction of silver carp to this eutrophic ecosystem changed the pathways of carbon flow from protozoan to zooplankton in the microbial food web.

Biological productivity of Lake Towada, a north temperate, oligotrophic, kokanee fishery lake

During the Lake Towada survey from April through October 1998, we measured primary production at shore and offshore stations, and calculated crustacean zooplankton production from samples collected at the offshore station. We then analyzed these data and compared them with commercial fishery data in order to discuss the energy flow in this lake where kokanee (Oncorhynchus nerka) fisheries are one of the main businesses. At all stations, primary production was relatively high: 150–300 mg C m−2 day−1 in April–mid-June and lower at ca. 100 mg C m−2 day−1 thereafter. The variation in primary productivity could largely be explained by multiple regression models that included phytoplankton biomass and ambient nutrient conditions as independent variables. Among zooplankton, rotifers had their peak abundance in May, before the crustacean zooplankton (Daphnia longispina, Bosmina longirostris, and Acanthodiaptomus pacificus) population was well established. D. longispina dominated the crustacean zooplankton community in terms of biomass and production; their production during the study period made up 80% of crustacean community production (19.6 g dry-wt m−2), which was 40% of primary production during the survey. In July, when the abundance of D. longispina was particularly high, their daily production slightly exceeded daily primary production, which resulted in ca. 30% and 75% reduction in the amount of particulate organic carbon and chlorophyll a, respectively, during this period. The community ingestion rate of crustacean zooplankton, calculated from their daily production (D. longispina accounted for 90%) and the assumption that their gross production efficiency (K1) was 60%, could roughly explain this reduction of particulate matter, corroborating previous studies that the grazing of D. longispina can significantly improve the water transparency of this lake. The catch of kokanee and pond smelt (Hypomesus transpacificus nipponensis, another important fish in the lake) during the survey corresponded to 1.1% of crustacean community production, and corresponded to 0.45% of the primary production, which is one of the highest recorded values. Bearing in mind that D. longispina was the major food item of planktivorous fish such as kokanee and pond smelt, the present study suggests that the energy transfer from phytoplankton to zooplankton to fish is outstandingly efficient, compared with other aquatic ecosystems, when D. longispina dominates in the lake.

Bottom‐up linkages between primary production, zooplankton, and fish in a shallow, hypereutrophic lake

Nutrient supply is a key bottom-up control of phytoplankton primary production in lake ecosystems. Top-down control via grazing pressure by zooplankton also constrains primary production and primary production may simultaneously affect zooplankton. Few studies have addressed these bidirectional interactions. We used convergent cross-mapping (CCM), a numerical test of causal associations, to quantify the presence and direction of the causal relationships among environmental variables (light availability, surface water temperature, NO3 -N, and PO4 -P), phytoplankton community composition, primary production, and the abundances of five functional zooplankton groups (large cladocerans, small cladocerans, rotifers, calanoids, and cyclopoids) in Lake Kasumigaura, a shallow, hypereutrophic lake in Japan. CCM suggested that primary production was causally influenced by NO3 -N and phytoplankton community composition; there was no detectable evidence of a causal effect of zooplankton on primary production. Our results also suggest that rotifers and cyclopoids were forced by primary production, and cyclopoids were further influenced by rotifers. However, our CCM suggested that primary production was weakly influenced by rotifers (i.e., bidirectional interaction). These findings may suggest complex linkages between nutrients, primary production, and rotifers and cyclopoids, a pattern that has not been previously detected or has been neglected. We used linear regression analysis to examine the relationships between the zooplankton community and pond smelt (Hypomesus nipponensis), the most abundant planktivore and the most important commercial fish species in Lake Kasumigaura. The relative abundance of pond smelt was significantly and positively correlated with the abundances of rotifers and cyclopoids, which were causally influenced by primary production. This finding suggests that bottom-up linkages between nutrient, primary production, and zooplankton abundance might be a key mechanism supporting high planktivore abundance in eutrophic lakes. Because increases in primary production and cyanobacteria blooms are likely to occur simultaneously in hypereutrophic lakes, our study highlights the need for ecosystem management to resolve the conflict between good water quality and high fishery production.