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Dive into the research topics where Michal Dohnal is active.

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Featured researches published by Michal Dohnal.


Biologia | 2006

Simulated cadmium transport in macroporous soil during heavy rainstorm using dual-permeability approach

Jaromir Dusek; Tomas Vogel; L’ubomír Lichner; Andrea Cipakova; Michal Dohnal

Numerical modelling is used to analyze the transport of cadmium in response to an extreme rainfall event. The cadmium transport through the soil profile was simulated by the one-dimensional dual-permeability model, which assumes the existence of two mutually communicating domains: the soil matrix domain and the preferential flow domain. The model is based on Richards’ equation for water flow and advection-dispersion equation for solute transport. A modified batch technique allowed us to consider domain specific sorption, i.e. each of the domains has its own distribution coefficient. The dual-permeability model predicts that the cadmium can be transported substantially below the root zone after the storm. On the other hand, classical single permeability approach predicted that almost all applied cadmium stays retained near the soil surface.


Journal of Hydrology and Hydromechanics | 2012

Uncertainty Analysis of a Dual-Continuum Model Used to Simulate Subsurface Hillslope Runoff Involving Oxygen-18 as Natural Tracer

Michal Dohnal; Tomas Vogel; Martin Šanda; Vladimira Jelinkova

Uncertainty Analysis of a Dual-Continuum Model Used to Simulate Subsurface Hillslope Runoff Involving Oxygen-18 as Natural Tracer A one-dimensional dual-continuum model (also known as dual-permeability model) was used to simulate the lateral component of subsurface runoff and variations in the natural 18O content in hillslope discharge. Model predictions were analyzed using the GLUE generalized likelihood uncertainty estimation procedure. Model sensitivity was evaluated by varying two separate triplets of parameters. The first triplet consisted of key parameters determining the preferential flow regime, i.e., the volumetric proportion of the preferential flow domain, a first-order transfer coefficient characterizing soil water exchange between the two flow domains of the dual-continuum system, and the saturated hydraulic conductivity of the preferential flow domain. The second triplet involved parameters controlling exclusively the soil hydraulic properties of the preferential flow domain, i.e., its retention curve and hydraulic conductivity function. Results of the analysis suggest high sensitivity to all parameters of the first triplet, and large differences in sensitivity to the parameters of the second triplet. The sensitivity analysis also confirmed a significant improvement in the identifiability of preferential flow parameters when 18O content was added to the objective function. Analýza Nejistot Při Modelování Podpovrchového Odtoku ze Svahu Metodou Duálního Kontinua s Využitím Izotopu Kyslíku 18O Jako Přirozeného Stopovače K simulacím laterální složky podpovrchového proudění a změn koncentrace izotopu kyslíku 18O ve vodě vytékající ze svahu byl použit jednorozměrný model využívající přístupu duálního kontinua. Nejistota modelových předpovědí byla odhadnuta s využitím metody zobecněné věrohodnosti (GLUE). Citlivost modelu byla zjišťována pomocí variací dvou samostatných trojic parametrů. První trojice sestávala z klíčových parametrů pro určení režimu preferenčního proudění, tj. objemového podílu preferenční domény proudění, přenosového koeficientu charakterizujícího výměnu vody mezi oběma doménami duálního systému a nasycené hydraulické vodivosti preferenční domény. Druhá trojice zahrnovala výhradně parametry určující hydraulické charakteristiky preferenční domény proudění, tj. retenční křivku a funkci hydraulické vodivosti. Z výsledků analýzy vyplývá vysoká citlivost modelu na všechny parametry z první trojice a velké rozdíly v citlivostech parametrů druhé trojice. Analýza dále potvrdila významné zlepšení zjistitelnosti parametrů preferenční domény v případě, kdy je do cílové funkce přidána koncentrace izotopu kyslíku 18O.


Journal of Hydrology and Hydromechanics | 2014

Rainfall interception and spatial variability of throughfall in spruce stand

Michal Dohnal; Tomáš Černý; Jana Votrubova; Miroslav Tesař

Abstract The interception was recognized as an important part of the catchment water balance in temperate climate. The mountainous forest ecosystem at experimental headwater catchment Liz has been subject of long-term monitoring. Unique dataset in terms of time resolution serves to determine canopy storage capacity and free throughfall. Spatial variability of throughfall was studied using one weighing and five tipping bucket rain gauges. The basic characteristics of forest affecting interception process were determined for the Norway spruce stand at the experimental area - the leaf area index was 5.66 - 6.00 m2 m-2, the basal area was 55.7 m2 ha-1, and the crown closure above individual rain gauges was between 19 and 95%. The total interception loss in both growing seasons analyzed was 34.5%. The mean value of the interception capacity determined was about 2 mm. Throughfall exhibited high variability from place to place and it was strongly affected by character of rainfall. On the other hand, spatial pattern of throughfall in average showed low variability.


Biologia | 2009

Ponded infiltration into soil with biopores — field experiment and modeling

Michal Dohnal; Jaromir Dusek; Tomas Vogel; Milena Cislerova; Ľubomír Lichner; Vlasta Štekauerová

Preferential movement of water in macropores plays an important role when the process of ponded infiltration in natural porous systems is studied. For example, the detailed knowledge of water flow through macropores is of a major importance when predicting runoff responses to rainfall events. The main objectives of this study are to detect preferential movement of water in Chernozem soil and to employ numerical modeling to describe the variably saturated flow during a field ponded infiltration experiment. The infiltration experiment was performed at the Macov experimental station (Calcari-Haplic Chernozem in Danubian Lowland, Slovakia). The experiment involved single ring ponded infiltration. At the quasi steady state phase of the experiment dye tracer was added to the infiltrating water. Then the soil profile was excavated and the penetration pattern of the applied tracer was recorded. The abundance of biopores as a product of fauna and flora was found. To quantify the preferential flow effects during the infiltration experiment, three-dimensional axisymmetric simulations were carried out by a two-dimensional dual-continuum numerical model. The water flow simulations based on measured hydraulic characteristics without consideration of preferential flow effects failed to describe the infiltration experiment adequately. The 3D axisymmetric simulation based on dual-permeability approach provided relatively realistic space-time distribution of soil water pressure below the infiltration ring.


Pest Management Science | 2011

Field leaching of pesticides at five test sites in Hawaii: modeling flow and transport

Jaromir Dusek; Michal Dohnal; Tomas Vogel; Chittaranjan Ray

BACKGROUND Physically based tier-II models may serve as possible alternatives to expensive field and laboratory leaching experiments required for pesticide approval and registration. The objective of this study was to predict pesticide fate and transport at five different sites in Hawaii using data from an earlier field leaching experiment and a one-dimensional tier-II model. As the predicted concentration profiles of pesticides did not provide close agreement with data, inverse modeling was used to obtain adequate reactive transport parameters. The estimated transport parameters of pesticides were also utilized in a tier-I model, which is currently used by the state authorities to evaluate the relative leaching potential. RESULTS Water flow in soil profiles was simulated by the tier-II model with acceptable accuracy at all experimental sites. The observed concentration profiles and center of mass depths predicted by the tier-II simulations based on optimized transport parameters provided better agreements than did the non-optimized parameters. With optimized parameters, the tier-I model also delivered results consistent with observed pesticide center of mass depths. CONCLUSION Tier-II numerical modeling helped to identify relevant transport processes in field leaching of pesticides. The process-based modeling of water flow and pesticide transport, coupled with the inverse procedure, can contribute significantly to the evaluation of chemical leaching in Hawaii soils.


Archive | 2012

Root Function: In Situ Studies Through Sap Flow Research

Nadezhda Nadezhdina; Teresa S. David; J.S. David; Valeriy Nadezhdin; Jan Čermák; Roman Gebauer; M. I. Ferreira; N. Conceição; Michal Dohnal; Miroslav Tesař; Karl Gartner; R. Ceulemans

Sap flow measured by the Heat Field Deformation technique, HFD, is sensitive to flow responses to small changes in water potential gradients within the tree hydraulic systems. When these changes occur abruptly, under experimental treatments (severing, localized irrigation, heavy loading), sap flow movement can be used as a marker to study root functionality, for example root ability to redistribute water and withstand heavy machinery pressure. Experiments also showed that a compensation mechanism may operate in trees, with a temporary increase in the absorbed water due to a preferential use of one part of the root system when another part is damaged or when a water source is lost. Long-term measurements of root sap flow allow distinguishing between water uptake from shallow and deep rooted trees, at different exposures at a forest edge and from healthy and infected trees. Root sap flow can be used as an indicator of tree stress or of the prevailing mechanisms used by trees to survive drought, under irrigation or rain-fed conditions.


Biologia | 2006

Simulation of soil water dynamics in structured heavy soils with respect to root water uptake

David Zumr; Michal Dohnal; Miroslav Hrnčíř; Milena Cislerova; Tomas Vogel; František Doležal

In agricultural lands has the soil moisture uptake from the root system a significant effect on the water regime of the soil profile. In texturally heavy soils, where preferential pathways are present, infiltrated precipitation and irrigation water with diluted fertilizers quickly penetrate to a significant depth and often reach an under-root zone or even the ground-water level. Such a scenario is likely to happen during long summer periods without rain followed by heavy precipitation events, when a part of the water may flow through desiccated cracks.Since 2001 the effects of drip irrigation and nitrogen fertilization of potatoes (Solanum tuberosum L., cultivar Agria) have been monitored within the frame of a research project at the experimental site Valecov (Czech Republic). Based upon the measured data an attempt has been made to simulate the water regime of the soil profile at a selected experimental plot, considering the impact of preferential flow and root water uptake. The dual-permeability simulation model S_1D_Dual (VOGEL et al., 2000) was used for the simulation. The soil hydraulic parameters were inversely determined using Levenberg-Marquardt method. Measured and simulated pressure heads were utilized in the optimization criterion. The scaling approach was applied to simplify the description of the spatial variability of the soil profile.The results of simulations demonstrate that during particular rainfall events the water reaches significant depths of the soil profile via preferential pathways. The effect of the root zone is dominant during dry periods, when capillary water uptake from the layers below roots becomes important. This should be taken in account into the optimization of the drip irrigation and nitrogen fertilization schedule.


Soil and Water Research | 2016

A Green Roof Segment for Monitoring the Hydrological and Thermal Behaviour of Anthropogenic Soil Systems

Vladimira Jelinkova; Michal Dohnal; Tomáš Picek

Jelinkova V., Dohnal M., Picek T. (2015): A green roof segment for monitoring the hydrological and thermal behav iour of anthropogenic soil systems. Soil & Water Res., 10: 262–270. Green roofs and similar anthropogenic soil-plant systems in conurbations have a high relevance for society, especially in a changing climate. Understanding the hydrological performance of green roof substrates is a significant task in the framework of sustainable urban planning and water/energy management in urban areas. Potential retention and detention capabilities of anthropogenic, light weight, highly permeable soil systems and their continued performance over time are of major importance. A green roof test segment was designed to investigate the benefits of such anthropogenic systems. This adaptable low-cost system allows for long-term monitoring of preferred characteristics. Temperature and water balance measurements complemented with me teorological observations and studies of physical properties of substrates provide a basis for a detailed analysis of thermal and hydrological regime in green roof systems. The very first results obtained from the test segment have confirmed the green roof systems benefits. Reduced temperature fluctuations as well as rainfall runoff were attained compared to the traditional roof systems. Depending on numerous factors including the substrate material or vegetation cover, in the green roof tested the temperature amplitude for a selected period of nonfreezing days (with minimum ambient air temperature of 2.8°C) was suppressed by about 6.5 °C o n average. The


Journal of Hydrology and Hydromechanics | 2016

Interpretation of ponded infiltration data using numerical experiments

Michal Dohnal; Tomas Vogel; Jaromir Dusek; Jana Votrubova; Miroslav Tesar

Abstract Ponded infiltration experiment is a simple test used for in-situ determination of soil hydraulic properties, particularly saturated hydraulic conductivity and sorptivity. It is known that infiltration process in natural soils is strongly affected by presence of macropores, soil layering, initial and experimental conditions etc. As a result, infiltration record encompasses a complex of mutually compensating effects that are difficult to separate from each other. Determination of sorptivity and saturated hydraulic conductivity from such infiltration data is complicated. In the present study we use numerical simulation to examine the impact of selected experimental conditions and soil profile properties on the ponded infiltration experiment results, specifically in terms of the hydraulic conductivity and sorptivity evaluation. The effect of following factors was considered: depth of ponding, ring insertion depth, initial soil water content, presence of preferential pathways, hydraulic conductivity anisotropy, soil layering, surface layer retention capacity and hydraulic conductivity, and presence of soil pipes or stones under the infiltration ring. Results were compared with a large database of infiltration curves measured at the experimental site Liz (Bohemian Forest, Czech Republic). Reasonably good agreement between simulated and observed infiltration curves was achieved by combining several of factors tested. Moreover, the ring insertion effect was recognized as one of the major causes of uncertainty in the determination of soil hydraulic parameters.


Revista Brasileira De Ciencia Do Solo | 2011

DETERMINATION OF HYDRAULIC PROPERTIES OF A TROPICAL SOIL OF HAWAII USING COLUMN EXPERIMENTS AND INVERSE MODELING

Martina Sobotkova; Michal Snehota; Michal Dohnal; Chittaranjan Ray

SUMMARY A method for determining soil hydraulic properties of a weathered tropical soil (Oxisol) using a medium-sized column with undisturbed soil is presented. The method was used to determine fitting parameters of the water retention curve and hydraulic conductivity functions of a soil column in support of a pesticide leaching study. The soil column was extracted from a continuously-used research plot in Central Oahu (Hawaii, USA) and its internal structure was examined by computed tomography. The experiment was based on tension infiltration into the soil column with free outflow at the lower end. Water flow through the soil core was mathematically modeled using a computer code that numerically solves the one-dimensional Richards equation. Measured soil hydraulic parameters were used for direct simulation, and the retention and soil hydraulic parameters were estimated by inverse modeling. The inverse modeling produced very good agreement between model outputs and measured flux and pressure head data for the relatively homogeneous column. The moisture content at a given pressure from the retention curve measured directly in small soil samples was lower than that obtained through parameter optimization based on experiments using a medium-sized undisturbed soil column.

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Tomas Vogel

Czech Technical University in Prague

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Jaromir Dusek

Czech Technical University in Prague

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Jana Votrubova

Czech Technical University in Prague

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Milena Cislerova

Czech Technical University in Prague

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Michal Snehota

Czech Technical University in Prague

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Vladimira Jelinkova

Czech Technical University in Prague

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Martin Šanda

Czech Technical University in Prague

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Miroslav Tesar

Academy of Sciences of the Czech Republic

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David Zumr

Czech Technical University in Prague

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