Michał Kotkowiak

Near and Far-Field Properties of Nanoprisms with Rounded Edges

Photonic devices can be developed, and their working principle can be understood only by considering the phenomena taking place at the nanoscale level. Optical properties of plasmonic structures depend on their geometric parameters and are sensitive to them. Recently, many advanced methods for the preparation of nanostructures have been proposed; however still, the geometric parameters are inaccurate. Numerical simulations provide a powerful tool for the analysis of plasmonic nanostructures. To the best of our knowledge, there are not many papers on near-field and far-field properties of single nanoprism and nanoprism dimer, the so-called bowtie, with rounded edges. For this purpose, Finite Integration Technique implemented to the CST Microwave Studio was used. Besides the edge rounding, an additional modification of the resonance modes was investigated, achieved by placement of a spherical nanoparticle in the gap between the prisms. Results of numerical simulations indicate that the radius of the curvature edges strongly affects the plasmon peak localization, and this effect cannot be neglected in plasmonic device design. Increase in the radius of edge curvature causes main extinction cross-section peak blueshift in all cases analyzed. Moreover, our calculations imply that the nanoparticle in the gap between prisms strongly influences the dependence of spectral properties on the radius curvature.

Unlocked nucleic acids: implications of increased conformational flexibility for RNA/DNA triplex formation

Unlocked nucleic acids (UNAs) have been introduced at specific positions in short model DNA hairpins and RNA/DNA triplexes for the first time. UNA residues destabilize the hairpins and decrease triplex thermodynamic stability or suppress triplex formation for most of the evaluated structures. Nevertheless, the incorporation of UNA residues at certain positions of dsDNA was found to be energetically favourable or at least did not affect triplex stability. Notably, the most thermodynamically stable UNA-modified triplexes exhibited improved stability at both acidic and physiological pH. The specificity of the interactions between the triplex-forming oligonucleotide and dsDNA was characterized using EMSA for the most thermodynamically stable structures, and triplex dissociation constants were determined. One of the modified triplexes exhibited an improved Kd in comparison with the unmodified triplex. CD and thermal difference spectra indicated that UNA residues do not alter the overall structure of the most thermodynamically stable triplexes. In addition, incubation of the modified oligonucleotides with human serum indicated that the UNAs demonstrate the potential to improve the biological stability of nucleic acids.

The effect of Cu doping on the mechanical and optical properties of zinc oxide nanowires synthesized by hydrothermal route

Zinc oxide (ZnO) is a wide-bandgap semiconductor material with applications in a variety of fields such as electronics, optoelectronic and solar cells. However, much of these applications demand a reproducible, reliable and controllable synthesis method that takes special care of their functional properties. In this work ZnO and Cu-doped ZnO nanowires are obtained by an optimized hydrothermal method, following the promising results which ZnO nanostructures have shown in the past few years. The morphology of as-prepared and copper-doped ZnO nanostructures is investigated by means of scanning electron microscopy and high resolution transmission electron microscopy. X-ray diffraction is used to study the impact of doping on the crystalline structure of the wires. Furthermore, the mechanical properties (nanoindentation) and the functional properties (absorption and photoluminescence measurements) of ZnO nanostructures are examined in order to assess their applicability in photovoltaics, piezoelectric and hybrids nanodevices. This work shows a strong correlation between growing conditions, morphology, doping and mechanical as well as optical properties of ZnO nanowires.

Nanostructured zinc oxide systems with gold nanoparticle pattern for efficient light trapping

In this work we describe the design of a system consisting of a zinc oxide nanowire array and ITO glass nanostructured with gold NPs. Our goal was to create a more efficient system that could be used in various optical applications, such as photovoltaics or photodetectors. The impact of gold NPs of different shapes, single as well as arranged in a pattern, on the optical properties of the system was studied by using a finite integration technique. The absorptance and transmittance spectra of individual components of the system were calculated. Finally, the integrated spectral enhancement factors of the photons absorbed and transmitted by the electrode were estimated using the different geometrical parameters of the electrode. The results suggested that the most effective absorber of light should include zinc oxide nanowires (NWs), with smaller diameters and cylindrical shapes of single gold NPs, as well as in a pattern, while the highest transmittance is obtained for greater diameter of NWs and conical shapes of gold NPs in a pattern. Based on these results, the absorption current density (derived from the generation and collection of light-generated charge carriers) was calculated for the ZnO-CdTe core-shell NWs nanostructured with gold NPs arranged into a pattern. The results suggest that the most efficient electrode contains ZnO NWs with gold NPs in a conical shaped pattern. Our results confirm the importance of computational simulation in the design of the photonic and photovoltaic devices, making it possible to predict the most efficient systems. These results could be useful to further optimize photonic or photovoltaic devices based on plasmonic NPs and semiconductor nanostructures.

Multiwavelength excitation of photosensitizers interacting with gold nanoparticles and its impact on optical properties of their hybrid mixtures

In a hybrid mixture of organic (dye) and inorganic (metallic nanoparticles) components, the optical properties of a dye can be easily controlled by tailoring the shape or the concentration of the noble metal nanoparticles (NPs). The influences of multiexcitation (multiwavelength excitation) of photosensitizers (pheophorbide a and hematoporphyrin) on the interactions with pegylated Au-NPs and on the photophysical parameters of the dyes are studied. Detailed, systematic fluorescence quenching studies were performed in the mixtures of different contents of Au-NPs, and interpreted together with the results of quantum singlet oxygen yield examinations. According to the results, the fluorescence of the two dyes studied was effectively quenched in the presence of Au-NPs, mainly because of the resonance energy transfer between the donor (dye) and the acceptor (Au-NPs). Stern-Volmer quenching constants were determined by a few orders of magnitude higher than those describing the photochemical quenching process. In hybrid mixtures analyzed, the mechanism of energy transfer between the donor and the acceptor was nanometal surface energy transfer. Furthermore, different behavior of the mixtures on excitation with the wavelengths from the Soret and Q bands of the dyes and with those corresponding to the surface plasmon resonance band of Au-NPs was analyzed. Moreover, for certain concentrations of Au-NPs and for certain excitation wavelengths, an increase in singlet oxygen generation was observed. The results obtained indicate the significance of further studies of photosensitizers in hybrid mixtures with NPs.

Intrinsic Photoprotective Mechanisms In Chlorophylls

Photosynthetic energy conversion competes with the formation of chlorophyll triplet states and the generation of reactive oxygen species. These may, especially under high light stress, damage the photosynthetic apparatus. Many sophisticated photoprotective mechanisms have evolved to secure a harmless flow of excitation energy through the photosynthetic complexes. Time-resolved laser-induced optoacoustic spectroscopy was used to compare the properties of the T1 states of pheophytin a and its metallocomplexes. The lowest quantum yield of the T1 state is always observed in the Mg complex, which also shows the least efficient energy transfer to O2 . Axial coordination to the central Mg further lowers the yield of both T1 and singlet oxygen. These results reveal the existence of intrinsic photoprotective mechanisms in chlorophylls, embedded in their molecular design, which substantially suppress the formation of triplet states and the efficiency of energy transfer to O2 , each by 20-25 %. Such intrinsic photoprotective effects must have created a large evolutionary advantage for the Mg complexes during their evolution as the principal photoactive cofactors of photosynthetic proteins.