Michel Pézolet

Complete amino acid sequence of puroindoline, a new basic and cystine‐rich protein with a unique tryptophan‐rich domain, isolated from wheat endosperm by Triton X‐114 phase partitioning

A new basic protein has been isolated from wheat endosperm by Triton X‐114 phase partitioning. It contains five disulfide bridges and is composed of equal amounts of a polypeptide chain of 115 amino acid residues and of the same chain with a C‐terminus dipeptide extension. The most striking sequence feature is the presence of a unique tryptophan‐rich domain so that this protein isolated from wheat seeds has been named puroindoline. The similar phase partitioning behavior in Triton X‐114 of this basic eystine‐rich protein and of purothionins suggests that puroindoline may also be a membranotoxin that might play a role in the defense mechanism of plants against microbial pathogens.

On the Spectral Subtraction of Water from the FT-IR Spectra of Aqueous Solutions of Proteins

A method is described for the quantitative subtraction of water from the transmission infrared spectra of aqueous solutions of proteins. The 2125-cm−1 association band of water is used as an internal intensity standard, and the scaling factor is determined with the use of a second-order least-squares fit. This method eliminates the user bias encountered with interactive methods and takes into account small baseline variations due to instrument drift. Statistical analysis of the results obtained demonstrates that at 10% w/w protein concentration, the error is of the order of 2% in the region of the amide I and II bands.

Polarization-modulated FT-IR spectroscopy of a spread monolayer at the air/water interface

This study devoted to the FT-IR spectroscopy of monolayers spread at the air/water interface is, to our knowledge, the first report presenting complete mid-infrared monolayer spectra perfectly extracted from the strong water vapor bands. This has been possible with the use of the polarization-modulated IRRAS method, which is not sensitive to the isotropic absorptions of the sample environment. On the basis of theoretical modeling and experiments, the best angle of incidence has been found near 76° for detection of intraplane as well as out-of-plane oriented monolayer absorptions. With the use of such experimental conditions, on the normalized difference (covered vs. uncovered water) PM-IRRAS spectra, monolayer vibrational bands come out upward or downward, depending on the orientation of their transition moment with respect to the interface. Application to the study of deuterated arachidic acid and arachidate monolayers allows observation of the vibrational modes of the polar head groups interacting with the liquid water molecules and provides some evidence of their symmetrical anchoring. The vibrational modes of the liquid water subphase contribute to these difference spectra as broad dips that certainly contain information on a possible restructuring of the water molecules at the interface.

Molecular basis of film formation from a soybean protein: comparison between the conformation of glycinin in aqueous solution and in films

Fourier transform infrared spectroscopy has been used to investigate the conformational changes of glycinin. a major storage protein of soybean seeds, upon film-forming. The results show that the secondary structure of glycinin is mainly composed of a beta-sheet (48%) and unordered (49%) structures. The amide I band of glycinin in film-forming conditions, i.e. in alkaline media and in the presence of plasticizing agent, reveals the conversion of 18% of the secondary structure of the protein from the beta-sheet (6%) and random coil (12%) to the alpha-helical conformation due to the helicogenic effect of the ethylene glycol used as the plasticizing agent. Conformational changes also occur upon the film-forming process leading to the formation of intermolecular hydrogen-bonded beta-sheet structures. Results obtained from other plant families indicate that, whatever the origin and conformation of protein, formation of films leads to the appearance of intermolecular hydrogen-bonded beta-sheet structures, suggesting that this type of structure might be essential for the network formation in films. Thus, it is hypothesized that, in the film state, intermolecular hydrogen bonding between segments of beta-sheet may act as junction zones in the film network. This study reveals for the first time that there is a close relationship between the conformation of proteins and the mechanical properties of films.

Polarization modulation FTIR spectroscopy at the air-water interface

Abstract Mid-infrared spectra of monolayers spread at the air-water interface have been obtained, completely devoid of strong water vapor absorptions, using polarization modulation infrared reflexion absorption spectroscopy (PM-IRRAS). On normalized difference (covered vs. uncovered water) PM-IRRAS spectra, the monolayer absorption bands appear upwards or downwards depending on the orientation of their transition moment with respect to the water surface. Vibrational modes of the water subphase contribute to these difference spectra as broad dips. Study of a monolayer of cadmium arachidate has allowed observation of the vibrational modes of the polar heads and provides some evidence of their symmetrical anchoring at the water surface. Under surface compression, a monolayer of deuterated arachidic acid undergoes a molecular reorganization leading to a better ordering of the deuterated chains.

Interaction of a nonspecific wheat lipid transfer protein with phospholipid monolayers imaged by fluorescence microscopy and studied by infrared spectroscopy.

The interaction of a nonspecific wheat lipid transfer protein (LTP) with phospholipids has been studied using the monolayer technique as a simplified model of biological membranes. The molecular organization of the LTP-phospholipid monolayer has been determined by using polarized attenuated total internal reflectance infrared spectroscopy, and detailed information on the microstructure of the mixed films has been investigated by using epifluorescence microscopy. The results show that the incorporation of wheat LTP within the lipid monolayers is surface-pressure dependent. When LTP is injected into the subphase under a dipalmytoylphosphatidylglycerol monolayer at low surface pressure (< 20 mN/m), insertion of the protein within the lipid monolayer leads to an expansion of dipalmytoylphosphatidylglycerol surface area. This incorporation leads to a decrease in the conformational order of the lipid acyl chains and results in an increase in the size of the solid lipid domains, suggesting that LTP penetrates both expanded and solid domains. By contrast, when the protein is injected under the lipid at high surface pressure (> or = 20 mN/m) the presence of LTP leads neither to an increase of molecular area nor to a change of the lipid order, even though some protein molecules are bound to the surface of the monolayer, which leads to an increase of the exposure of the lipid ester groups to the aqueous environment. On the other hand, the conformation of LTP, as well as the orientation of alpha-helices, is surface-pressure dependent. At low surface pressure, the alpha-helices inserted into the monolayers are rather parallel to the monolayer plane. In contrast, at high surface pressure, the alpha-helices bound to the surface of the monolayers are neither parallel nor perpendicular to the interface but in an oblique orientation.

Conformation of wheat gluten proteins : comparison between functional and solution states as determined by infrared spectroscopy

The conformation of wheat gluten proteins in their functional hydrated solid state (doughy state) has been studied for the first time using attenuated total reflection infrared spectroscopy. The amide I band of functional gluten proteins reveals that, in addition to β‐turns and α‐helices, these proteins contain a significant amount of intra‐ and intermolecular extended β‐sheet structures. It appears that the solubilization of gluten proteins results in a major decrease of the amount of β‐sheet structures accompanied by an increase of the content of the β‐turn and α‐helical conformations. In addition, the α‐helices appears to be more distorded in solution than in the functional state. Furthermore, spectra of ω‐ and γ‐gliadins, which are two types of prolamins of differing amino acid sequence and conformation, confirm the results obtained on the functional protein system. These results suggest that viscoelastic gluten proteins may interact through aligned β‐sheets corresponding to their repetitive domains.

Amino acid sequence of a non-specific wheat phospholipid transfer protein and its conformation as revealed by infrared and Raman spectroscopy. Role of disulfide bridges and phospholipids in the stabilization of the α-helix structure

A wheat non specific phospholipid transfer protein has been isolated from wheat seeds and its amino acid sequence reveals that it is composed of 90 residues for a molecular weight of 9607. From the comparison of its sequence with those of the eight known proteins of the same family, hypotheses on the role of some conserved residues in the transfer activity can be made. The conformation of this protein has been studied by Raman and Fourier transform infrared spectroscopy and this is the first report on the structure of non specific plant phospholipid transfer proteins. As opposed to previous studies on the structure prediction from the amino acid sequence, the results obtained show that plant non specific phospholipid transfer proteins are not almost entirely composed of beta-sheets. Instead, infrared results show that the wheat protein contains 41% alpha-helix and 19% beta-sheet structures, while 40% of the conformation is undefined or composed of turns. Raman spectroscopy shows that three disulfide bridges adopt a gauche-gauche-gauche conformation while the other exhibits a gauche-gauche-trans conformation, and that the two tyrosine residues are hydrogen bonded to water molecules. The cleavage of the disulfide bonds affects significantly the conformation of the protein, the extended confirmation being increased by 15% at the expense of the alpha-helix content. On the other hand, the binding of 1-palmitoyllysophosphatidylcholine to the protein leads to an increase of 8% of the alpha-helix content compared to the free protein. Secondary structure predictions from the amino acid sequence suggest that the binding of a phospholipid stabilizes helicity of the amphipathic helices while the reduction of disulfide bonds would affect the stability of the N-terminal helix. The extended structure located at the C-terminus is not affected. Finally, the wheat phospholipid transfer protein has no effect on the thermotropic behavior of large unilamellar vesicles of dimyristoylphosphatidylcholine while it increases the conformational order of the acyl chains of large unilamellar vesicles of dimyristoylphosphatidylglycerol in the liquid-crystalline state. No major conformational changes of the protein are observed when it is adsorbed to phospholipid vesicles. These results suggest that the helical structure is essential for the transfer activity without excluding a possible role of the C-terminal extended structure on the adsorption to phospholipid vesicles.

Inclusion/exclusion of fatty acids in amylose complexes as a function of the fatty acid chain length

Structural models are proposed for amylose-fatty acid complexes depending on the respective chain lengths of their constituents. The three studied fatty acids induce the Vh amylose crystalline type. However, in contrast to lauric and palmitic acids, caprylic acid is not present in crystals. On the basis of the relative amounts of amylose and fatty acid determined in complexes and previous results of molecular modelling, inclusion of lauric and palmitic acids inside the amylose helices is proposed; the acyl chains are included in crystalline areas and the carboxylic groups in amorphous areas. The absence of caprylic acid in crystals could be due to the solubility of this compound in the crystallization medium.

Study by infrared spectroscopy of the conformation of dipalmitoylphosphatidylglycerol monolayers at the air–water interface and transferred on solid substrates

Abstract A parallel investigation of the conformational changes of dipalmitoylphosphatidylglycerol (DPPG) monolayers induced by surface pressure has been studied in situ at the air water interface using polarization modulation external infrared reflection absorption spectroscopy (PM-IRRAS) and on solid substrate by attenuated total reflection (ATR) spectroscopy. For both the ATR and PM-IRRAS spectra of DPPG, the non-linear increase of the intensity of the antisymmetric methylene stretching band of DPPG with molecular surface density, indicates that the compression of the DPPG monolayer induces a change of the conformation and/or orientation of the acyl chains of the phospholipid. At surface pressures between 7 and 20 mN/m, the acyl chains of the DPPG monolayer are found to be more ordered on the germanium substrate than at the air–water interface. At higher surface pressures, the conformation of the lipid acyl chains of DPPG on both substrates are almost similar. In the liquid-condensed phase, the acyl chains are in all-trans conformation and their tilt angle with respect to the normal of the film is approximately 30°. Our results also suggest the presence of DPPG solid domains in the liquid-expanded phase. Investigation of polar head group region indicates that at low surface pressures, the carbonyl groups were more oriented on the water surface than the acyl chains. Finally, the present study shows that intermolecular hydrogen bonding probably occur between the glycerol hydroxyl and the phosphate or carbonyl groups of the phospholipid.