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Accounts of Chemical Research | 2015

Toward molecular catalysts by computer.

Simone Raugei; Daniel L. DuBois; Roger Rousseau; Shentan Chen; Ming-Hsun Ho; R. Morris Bullock; Michel Dupuis

CONSPECTUS: Rational design of molecular catalysts requires a systematic approach to designing ligands with specific functionality and precisely tailored electronic and steric properties. It then becomes possible to devise computer protocols to design catalysts by computer. In this Account, we first review how thermodynamic properties such as redox potentials (E°), acidity constants (pKa), and hydride donor abilities (ΔGH(-)) form the basis for a framework for the systematic design of molecular catalysts for reactions that are critical for a secure energy future. We illustrate this for hydrogen evolution and oxidation, oxygen reduction, and CO conversion, and we give references to other instances where it has been successfully applied. The framework is amenable to quantum-chemical calculations and conducive to predictions by computer. We review how density functional theory allows the determination and prediction of these thermodynamic properties within an accuracy relevant to experimentalists (∼0.06 eV for redox potentials, ∼1 pKa unit for pKa values, and 1-2 kcal/mol for hydricities). Computation yielded correlations among thermodynamic properties as they reflect the electron population in the d shell of the metal center, thus substantiating empirical correlations used by experimentalists. These correlations point to the key role of redox potentials and other properties (pKa of the parent aminium for the proton-relay-based catalysts designed in our laboratory) that are easily accessible experimentally or computationally in reducing the parameter space for design. These properties suffice to fully determine free energies maps and profiles associated with catalytic cycles, i.e., the relative energies of intermediates. Their prediction puts us in a position to distinguish a priori between desirable and undesirable pathways and mechanisms. Efficient catalysts have flat free energy profiles that avoid high activation barriers due to low- and high-energy intermediates. The criterion of a flat energy profile can be mathematically resolved in a functional in the reduced parameter space that can be efficaciously calculated by means of the correlation expressions. Optimization of the functional permits the prediction by computer of design points for optimum catalysts. Specifically, the optimization yields the values of the thermodynamic properties for efficient (high rate and low overpotential) catalysts. We are on the verge of design of molecular electrocatalysts by computer. Future efforts must focus on identifying actual ligands that possess these properties. We believe that this can also be achieved through computation, using Taft-like relationships linking molecular composition and structure with electron-donating ability and steric effects. We note also that the approach adopted here of using free energy maps to decipher catalytic pathways and mechanisms does not account for kinetic barriers associated with elementary steps along the catalytic pathway, which may make thermodynamically accessible intermediates kinetically inaccessible. Such an extension of the approach will require further computations that, however, can take advantage of Polanyi-like linear free energy relationships linking activation barriers and reaction free energies.


Journal of Chemical Theory and Computation | 2013

Evaluation of the Role of Water in the H2 Bond Formation by Ni(II)-based Electrocatalysts

Ming-Hsun Ho; Simone Raugei; Roger Rousseau; Michel Dupuis; R. Morris Bullock

We investigate the role of water in the H-H bond formation by a family of nickel molecular catalysts that exhibit high rates for H2 production in acetonitrile solvent. A key feature leading to the high reactivity is the Lewis acidity of the Ni(II) center and pendant amines in the diphosphine ligand that function as Lewis bases, facilitating H-H bond formation or cleavage. Significant increases in the rate of H2 production have been reported in the presence of added water. Our calculations show that molecular water can displace an acetonitrile solvent molecule in the first solvation shell of the metal. One or two water molecules can also participate in shuttling a proton that can combine with a metal hydride to form the H-H bond. However the participation of the water molecules does not lower the barrier to H-H bond formation. Thus these calculations suggest that the rate increase due to water in these electrocatalysts is not associated with the elementary step of H-H bond formation or cleavage but rather with the proton delivery steps. We attribute the higher barrier in the H-H bond formation in the presence of water to a decrease in direct interaction between the protic and hydridic hydrogen atoms forced by the water molecules.


Journal of the American Chemical Society | 2012

Proton Delivery and Removal in [Ni(PR2NR′2)2]2+ Hydrogen Production and Oxidation Catalysts

Molly O’Hagan; Ming-Hsun Ho; Jenny Y. Yang; Aaron M. Appel; M. Rakowski DuBois; Simone Raugei; Wendy J. Shaw; Daniel L. DuBois; R. Morris Bullock


ACS Catalysis | 2014

Computing Free Energy Landscapes: Application to Ni-based Electrocatalysts with Pendant Amines for H2 Production and Oxidation

Shentan Chen; Ming-Hsun Ho; R. Morris Bullock; Daniel L. DuBois; Michel Dupuis; Roger Rousseau; Simone Raugei


Organometallics | 2013

Conformational Dynamics and Proton Relay Positioning in Nickel Catalysts for Hydrogen Production and Oxidation

James A. Franz; Molly O’Hagan; Ming-Hsun Ho; Tianbiao Liu; Monte L. Helm; Sheri Lense; Daniel L. DuBois; Wendy J. Shaw; Aaron M. Appel; Simone Raugei; R. Morris Bullock


Organometallics | 2012

Incorporating amino acid esters into catalysts for hydrogen oxidation: Steric and electronic effects and the role of water as a base

Sheri Lense; Ming-Hsun Ho; Shentan Chen; Avijita Jain; Simone Raugei; John C. Linehan; John A. S. Roberts; Aaron M. Appel; Wendy J. Shaw


Applications of Molecular Modeling to Challenges in Clean Energy | 2013

Bio-Inspired Molecular Catalysts for Hydrogen Oxidation and Hydrogen Production

Ming-Hsun Ho; Shentan Chen; Roger Rousseau; Michel Dupuis; R. Morris Bullock; Simone Raugei


Scopus | 2012

The role of pendant amines in the breaking and forming of molecular hydrogen catalyzed by nickel complexes

Simone Raugei; Shentan Chen; Ming-Hsun Ho; Bojana Ginovska-Pangovska; Roger Rousseau; Michel Dupuis; Daniel L. DuBois; R.M. Bullock


Scopus | 2015

Water-assisted proton delivery and removal in bio-inspired hydrogen production catalysts

Ming-Hsun Ho; M. O'Hagan; Michel Dupuis; Daniel L. DuBois; R.M. Bullock; W.J. Shaw; Simone Raugei


Chemistry: A European Journal | 2013

Cover Picture: The Role of a Dipeptide Outer‐Coordination Sphere on H2‐Production Catalysts: Influence on Catalytic Rates and Electron Transfer (Chem. Eur. J. 6/2013)

Matthew L. Reback; Bojana Ginovska-Pangovska; Ming-Hsun Ho; Avijita Jain; Thomas C. Squier; Simone Raugei; John A. S. Roberts; Wendy J. Shaw

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Simone Raugei

Pacific Northwest National Laboratory

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Daniel L. DuBois

Pacific Northwest National Laboratory

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Michel Dupuis

Pacific Northwest National Laboratory

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R. Morris Bullock

Pacific Northwest National Laboratory

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Roger Rousseau

Pacific Northwest National Laboratory

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Shentan Chen

Pacific Northwest National Laboratory

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Wendy J. Shaw

Pacific Northwest National Laboratory

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Aaron M. Appel

Pacific Northwest National Laboratory

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Bojana Ginovska-Pangovska

Pacific Northwest National Laboratory

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Avijita Jain

Indiana University of Pennsylvania

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