Mohammed Javeed Zaki

SPADE: an efficient algorithm for mining frequent sequences

In this paper we present SPADE, a new algorithm for fast discovery of Sequential Patterns. The existing solutions to this problem make repeated database scans, and use complex hash structures which have poor locality. SPADE utilizes combinatorial properties to decompose the original problem into smaller sub-problems, that can be independently solved in main-memory using efficient lattice search techniques, and using simple join operations. All sequences are discovered in only three database scans. Experiments show that SPADE outperforms the best previous algorithm by a factor of two, and by an order of magnitude with some pre-processed data. It also has linear scalability with respect to the number of input-sequences, and a number of other database parameters. Finally, we discuss how the results of sequence mining can be applied in a real application domain.

Scalable algorithms for association mining

Association rule discovery has emerged as an important problem in knowledge discovery and data mining. The association mining task consists of identifying the frequent itemsets, and then forming conditional implication rules among them. We present efficient algorithms for the discovery of frequent itemsets which forms the compute intensive phase of the task. The algorithms utilize the structural properties of frequent itemsets to facilitate fast discovery. The items are organized into a subset lattice search space, which is decomposed into small independent chunks or sublattices, which can be solved in memory. Efficient lattice traversal techniques are presented which quickly identify all the long frequent itemsets and their subsets if required. We also present the effect of using different database layout schemes combined with the proposed decomposition and traversal techniques. We experimentally compare the new algorithms against the previous approaches, obtaining improvements of more than an order of magnitude for our test databases.

Efficiently mining frequent trees in a forest

Mining frequent trees is very useful in domains like bioinformatics, web mining, mining semistructured data, and so on. We formulate the problem of mining (embedded) subtrees in a forest of rooted, labeled, and ordered trees. We present TREEMINER, a novel algorithm to discover all frequent subtrees in a forest, using a new data structure called scope-list. We contrast TREEMINER with a pattern matching tree mining algorithm (PATTERNMATCHER). We conduct detailed experiments to test the performance and scalability of these methods. We find that TREEMINER outperforms the pattern matching approach by a factor of 4 to 20, and has good scaleup properties. We also present an application of tree mining to analyze real web logs for usage patterns.

Fast vertical mining using diffsets

A number of vertical mining algorithms have been proposed recently for association mining, which have shown to be very effective and usually outperform horizontal approaches. The main advantage of the vertical format is support for fast frequency counting via intersection operations on transaction ids (tids) and automatic pruning of irrelevant data. The main problem with these approaches is when intermediate results of vertical tid lists become too large for memory, thus affecting the algorithm scalability.In this paper we present a novel vertical data representation called Diffset, that only keeps track of differences in the tids of a candidate pattern from its generating frequent patterns. We show that diffsets drastically cut down the size of memory required to store intermediate results. We show how diffsets, when incorporated into previous vertical mining methods, increase the performance significantly.

Generating non-redundant association rules

The traditional association rule mining framework produces many redundant rules. The extent of redundancy is a lot larger than previously suspected. We present a new framework for associations based on the concept of closed frequent itemsets. The number of non-redundant rules produced by the new approach is exponentially (in the length of the longest frequent itemset) smaller than the rule set from the traditional approach. Experiments using several “hard” as well as “easy” real and synthetic databases confirm the utility of our framework in terms of reduction in the number of rules presented to the user, and in terms of time.

Parallel and distributed association mining: a survey

The author surveys the state of the art in parallel and distributed association-rule-mining algorithms and uncovers the fields challenges and open research problems. This survey can serve as a ref...The author surveys the state of the art in parallel and distributed association-rule-mining algorithms and uncovers the fields challenges and open research problems. This survey can serve as a reference for both researchers and practitioners.

Mining Non-Redundant Association Rules

The traditional association rule mining framework produces many redundant rules. The extent of redundancy is a lot larger than previously suspected. We present a new framework for associations based on the concept of closed frequent itemsets. The number of non-redundant rules produced by the new approach is exponentially (in the length of the longest frequent itemset) smaller than the rule set from the traditional approach. Experiments using several “hard” as well as “easy” real and synthetic databases confirm the utility of our framework in terms of reduction in the number of rules presented to the user, and in terms of time.

Efficiently mining maximal frequent itemsets

We present GenMax, a backtracking search based algorithm for mining maximal frequent itemsets. GenMax uses a number of optimizations to prune the search space. It uses a novel technique called progressive focusing to perform maximality checking, and diffset propagation to perform fast frequency computation. Systematic experimental comparison with previous work indicates that different methods have varying strengths and weaknesses based on dataset characteristics. We found GenMax to be a highly efficient method to mine the exact set of maximal patterns.

Efficiently mining frequent trees in a forest: algorithms and applications

Mining frequent trees is very useful in domains like bioinformatics, Web mining, mining semistructured data, etc. We formulate the problem of mining (embedded) subtrees in a forest of rooted, labeled, and ordered trees. We present TREEMINER, a novel algorithm to discover all frequent subtrees in a forest, using a new data structure called scope-list. We contrast TREEMINER with a pattern matching tree mining algorithm (PATTERNMATCHER), and we also compare it with TREEMINERD, which counts only distinct occurrences of a pattern. We conduct detailed experiments to test the performance and scalability of these methods. We also use tree mining to analyze RNA structure and phylogenetics data sets from bioinformatics domain.

A Survey of Link Prediction in Social Networks

Link prediction is an important task for analying social networks which also has applications in other domains like, information retrieval, bioinformatics and e-commerce. There exist a variety of techniques for link prediction, ranging from feature-based classification and kernel-based method to matrix factorization and probabilistic graphical models. These methods differ from each other with respect to model complexity, prediction performance, scalability, and generalization ability. In this article, we survey some representative link prediction methods by categorizing them by the type of the models. We largely consider three types of models: first, the traditional (non-Bayesian) models which extract a set of features to train a binary classification model. Second, the probabilistic approaches which model the joint-probability among the entities in a network by Bayesian graphical models. And, finally the linear algebraic approach which computes the similarity between the nodes in a network by rank-reduced similarity matrices. We discuss various existing link prediction models that fall in these broad categories and analyze their strength and weakness. We conclude the survey with a discussion on recent developments and future research direction.