N. Uzunbajakava
University of Twente
Network
Latest external collaboration on country level. Dive into details by clicking on the dots.
Publication
Featured researches published by N. Uzunbajakava.
Biophysical Journal | 2003
N. Uzunbajakava; Aufrid T.M. Lenferink; Yvonne M. Kraan; E. Volokhina; G.F.J.M. Vrensen; Jan Greve; Cornelis Otto
Nonresonant confocal Raman imaging has been used to map the DNA and the protein distributions in individual single human cells. The images are obtained on an improved homebuilt confocal Raman microscope. After statistical analysis, using singular value decomposition, the Raman images are reconstructed from the spectra covering the fingerprint region. The data are obtained at a step interval of approximately 250 nm and cover a field from 8- to 15- micro m square in size. Dwell times at each pixel are between 0.5 and 2 s, depending on the nature and the state of the cell under investigation. High quality nonresonant Raman images can only be obtained under these conditions using continuous wave high laser powers between 60 and 120 mW. We will present evidence that these laser powers can still safely be used to recover the chemical distributions in fixed cells. The developed Raman imaging method is used to image directly, i.e., without prior labeling, the nucleotide condensation and the protein distribution in the so-called nuclear fragments of apoptotic HeLa cells. In the control (nonapoptotic) HeLa cells, we show, for the first time by Raman microspectroscopy, the presence of the RNA in a cell nucleus.
Optics Letters | 2003
N. Uzunbajakava; Cees Otto
We demonstrate a confocal optical microscope that combines cw two-photon-excited fluorescence microscopy with confocal Raman microscopy. With this microscope fast image acquisition with fluorescence imaging can be used to select areas of interest for subsequent chemical analysis with spontaneous Raman imaging. The distribution of the UV-absorbing fluorophore Hoechst 33342 in the apoptotic HeLa cells is measured in the combined cw two-photon-excited fluorescence and Raman microscopy modes. The 647-nm line of a Kr-ion laser is used to excite both the Raman scattering and the two-photon-excited fluorescence emission. The lateral and axial resolutions in the two imaging modes are compared by use of the Gaussian beam approximation and backprojection of the focal volume through the confocal pinhole.
Biomedical optics | 2003
N. Uzunbajakava; Jan Greve; Cees Otto
Singular value decomposition was applied to the set of the non-resonant Raman spectra, recorded during Raman imaging of the single apoptotic cell. The basis vectors and the corresponding singular values were assessed in terms of their statistical significance. The noise-containing basis vectors were rejected while keeping the meaningful ones. In this way the Raman images of the apoptotic cell were successfully reconstructed from the spectrally-filtered data matrix. The results are demonstrated on the spatial distribution of the DNA, protein and phospholipids, present in the fragments of the apoptotic cell.
Biopolymers | 2003
N. Uzunbajakava; Aufrid T.M. Lenferink; Yvonne M. Kraan; B. Willekens; G.F.J.M. Vrensen; Jan Greve; Cornelis Otto
Journal of the American Chemical Society | 2005
Arjan A. C. van Wijk; Arnold Spaans; N. Uzunbajakava; Cees Otto; Huub J. M. de Groot; Johan Lugtenburg; Francesco Buda
Journal of the American Chemical Society | 2003
Henk-Jan van Manen; N. Uzunbajakava; Robin van Bruggen; Dirk Roos; Cees Otto
Polymer | 2005
B. Marton; Leo G.J. van der Ven; Cees Otto; N. Uzunbajakava; Mark A. Hempenius; G. Julius Vancso
Imaging & Microscopy | 2004
N. Uzunbajakava; H.J. van Manen; Cornelis Otto
Archive | 2004
H.J. van Manen; N. Uzunbajakava; R. van Bruggen; D. Roos; Cornelis Otto
Proceedings of the Dutch Annual Conference on BioMedical Engineering | 2003
N. Uzunbajakava; Aufrid T.M. Lenferink; Yvonne M. Kraan; Jan Greve; Cornelis Otto; W.M.G.F. Pontenagel; Jan Feijen