Nadia N. Casillas-Ituarte

Solvation of Magnesium Dication: Molecular Dynamics Simulation and Vibrational Spectroscopic Study of Magnesium Chloride in Aqueous Solutions

Magnesium dication plays many significant roles in biochemistry. While it is available to the environment from both ocean waters and mineral salts on land, its roles in environmental and atmospheric chemistry are still relatively unknown. Several pieces of experimental evidence suggest that contact ion pairing may not exist at ambient conditions in solutions of magnesium chloride up to saturation concentrations. This is not typical of most ions. There has been disagreement in the molecular dynamics literature concerning the existence of ion pairing in magnesium chloride solutions. Using a force field developed during this study, we show that contact ion pairing is not energetically favorable. Additionally, we present a concentration-dependent Raman spectroscopic study of the Mg-O(water) hexaaquo stretch that clearly supports the absence of ion pairing in MgCl(2) solutions, although a transition occurring in the spectrum between 0.06x and 0.09x suggests a change in solution structure. Finally, we compare experimental and calculated observables to validate our force field as well as two other commonly used magnesium force fields, and in the process show that ion pairing of magnesium clearly is not observed at higher concentrations in aqueous solutions of magnesium chloride, independent of the choice of magnesium force field, although some force fields give better agreement to experimental results than others.

Shedding light on water structure at air-aqueous interfaces: ions, lipids, and hydration

An account is given of the current state of understanding of aqueous salt, acid, and lipid/water surfaces, interfacial depth, and molecular organization within the air-solution interfacial region. Water structure, hydration, surface propensity of solutes, and surface organization are discussed. In this perspective, vibrational sum frequency generation spectroscopic studies of aqueous surfaces are interpreted. Comment on future directions within the field of aqueous surface structure is provided.

Polymorphisms in fibronectin binding protein A of Staphylococcus aureus are associated with infection of cardiovascular devices

Medical implants, like cardiovascular devices, improve the quality of life for countless individuals but may become infected with bacteria like Staphylococcus aureus. Such infections take the form of a biofilm, a structured community of bacterial cells adherent to the surface of a solid substrate. Every biofilm begins with an attractive force or bond between bacterium and substratum. We used atomic force microscopy to probe experimentally forces between a fibronectin-coated surface (i.e., proxy for an implanted cardiac device) and fibronectin-binding receptors on the surface of individual living bacteria from each of 80 clinical isolates of S. aureus. These isolates originated from humans with infected cardiac devices (CDI; n = 26), uninfected cardiac devices (n = 20), and the anterior nares of asymptomatic subjects (n = 34). CDI isolates exhibited a distinct binding-force signature and had specific single amino acid polymorphisms in fibronectin-binding protein A corresponding to E652D, H782Q, and K786N. In silico molecular dynamics simulations demonstrate that residues D652, Q782, and N786 in fibronectin-binding protein A form extra hydrogen bonds with fibronectin, complementing the higher binding force and energy measured by atomic force microscopy for the CDI isolates. This study is significant, because it links pathogenic bacteria biofilms from the length scale of bonds acting across a nanometer-scale space to the clinical presentation of disease at the human dimension.

Na+ and Ca2+ Effect on the Hydration and Orientation of the Phosphate Group of DPPC at Air−Water and Air−Hydrated Silica Interfaces

Hydration and orientation of the phosphate group of dipalmitoylphosphatidylcholine (DPPC) monolayers in the liquid-expanded (LE) phase and the liquid-condensed (LC) phase in the presence of sodium ions and calcium ions was investigated with vibrational sum frequency generation (SFG) spectroscopy at the air-aqueous interface in conjunction with surface pressure measurements. In the LE phase, both sodium and calcium affect the phosphate group hydration. In the LC phase, however, sodium ions affect the phosphate hydration subtly, while calcium ions cause a marked dehydration. Silica-supported DPPC monolayers prepared by the Langmuir-Blodgett method reveal similar hydration behavior relative to that observed in the corresponding aqueous subphase for the case of water and in the presence of sodium ions. However, in the presence of calcium ions the phosphate group dehydration is greater than that from the corresponding purely aqueous CaCl(2) subphase. The average tilt angles from the surface normal of the PO(2)(-) group of DPPC monolayers on the water surface and on the silica substrate calculated from SFG data are found to be 59 degrees +/- 3 degrees and 72 degrees +/- 5 degrees , respectively. Orientation of the phosphate group is additionally affected by the presence of ions. These findings show that extrapolation of results obtained from model membranes from liquid surfaces to solid supports may not be warranted since there are differences in headgroup organization on the two subphases.

Surface organization of aqueous MgCl2 and application to atmospheric marine aerosol chemistry

Inorganic salts in marine aerosols play an active role in atmospheric chemistry, particularly in coastal urban regions. The study of the interactions of these ions with water molecules at the aqueous surface helps to elucidate the role of inorganic cations and anions in atmospheric processes. We present surface vibrational sum frequency generation (SFG) spectroscopic and molecular dynamics (MD) studies of aqueous MgCl2 surfaces as models of marine aerosol. Spectroscopy results reveal that the disturbance of the hydrogen bonding environment of the air/aqueous interface is dependent on the MgCl2 concentration. At low concentrations (< 1 M) minor changes are observed. At concentrations above 1 M the hydrogen bonding environment is highly perturbed. The 2.1 M intermediate concentration solution shows the largest SFG response relative to the other solutions including concentrations as high as 4.7 M. The enhancement of SFG signal observed for the 2.1 M solution is attributed to a larger SFG-active interfacial region and more strongly oriented water molecules relative to other concentrations. MD simulations reveal concentration dependent compression of stratified layers of ions and water orientation differences at higher concentrations. SFG and MD studies of the dangling OH of the surface water reveal that the topmost water layer is affected structurally at high concentrations (> 3.1 M). Finally, the MgCl2 concentration effect on a fatty acid coated aqueous surface was investigated and SFG spectra reveal that deprotonation of the carboxylic acid of atmospherically relevant palmitic acid (PA) is accompanied by binding of the Mg2+ to the PA headgroup.

Effect of Magnesium Cation on the Interfacial Properties of Aqueous Salt Solutions

Sodium chloride solutions have been used extensively as a model of seawater in both theoretical and experimental studies of the chemistry of sea salt aerosol. Many groups have found that chloride anions are present at the air-solution interface. This observation has been important for the development of a mechanism for the heterogeneous production of molecular chlorine from chloride in sea salt aerosol. However, while sodium chloride is a major constituent of seawater, it is by no means the only salt present. Seawater contains one Mg(2+) for every eight Na(+). Mg(2+) is naturally occurring in ocean waters from mineral deposits in the Earths crust and biological sources. Mg(2+) forms a hexahydrate structure, rather than contact ion pairs with chloride anion, and this impacts the ordering of water in solution. In this study, we use molecular dynamics simulations, ab initio calculations, and vibrational sum frequency generation (SFG) spectroscopy to explore the effect of the Mg(2+) cation and its tightly bound solvation shell on the surface propensity of chloride, ion-ion interactions, and water structure of the air-solution interface of concentrated chloride salt solutions. In addition, we provide molecular level details that may be relevant to the heterogeneous reactions of chloride in deliquesced sea salt aerosols. In particular, we show that the presence of the divalent Mg(2+) cation does not modify the surface propensity of chloride compared to Na(+) and hence, its availability to interfacial reaction, although some differences in the behavior of chloride may occur due to specific ion interactions. In this work, we also discuss the SFG free OH band at the surface of salt solutions and conclude that it is often not straightforward to interpret.

Surface Residence and Uptake of Methyl Chloride and Methyl Alcohol at the Air/Water Interface Studied by Vibrational Sum Frequency Spectroscopy and Molecular Dynamics †

Vibrational sum frequency generation (VSFG) spectroscopy and molecular dynamics (MD) simulations are used to study the surface residence and organization of gas-phase methyl halide and methyl alcohol molecules adsorbed to the air/water interface, while Raman spectroscopy is used to detect the uptake of the gas-phase species into the bulk aqueous phase. Spectroscopy results reveal the presence of methyl alcohol in the bulk and at the surface. Methyl chloride is detected in the bulk, but not at the surface. This indicates that methyl alcohol adsorbs to the aqueous surface in a layer that is ordered, in agreement with previous studies, and is also readily taken up into the bulk aqueous phase, whereas methyl chloride adsorbs, but, while being taken up into the bulk liquid, has lower surface number density and/or forms a more disordered surface layer than methyl alcohol. MD simulations show that methyl halide molecules transition readily between the gas phase and interface, resulting in significantly shorter residence times at the surface for the methyl halides relative to methyl alcohol. Both the geometries that the methyl species adopt at the interface and the interactions between the methyl species and the interfacial water molecules differ for the halides and the alcohol. Complementary studies of butyl species show similar results: butyl alcohol adsorbs to the aqueous surface in a layer that exhibits a certain degree of order corresponding to the chains aligned along the surface normal, while a markedly more disordered surface layer and shorter residence times are observed in MD simulations for the butyl halides as compared to the alcohol. Desorption from the interface was found to be less frequent for the butyl halides than for the methyl halides by MD simulations. Although Raman studies show uptake of the butyl alcohol into the bulk phase, neither Raman studies nor MD simulations provide any evidence for uptake of the butyl halides into the bulk phase. The profound difference in preferred orientations between alkyl halides and alcohols at the aqueous surface, with the halogen atom of the alkyl halides being to a large degree exposed to the vapor phase, is likely to have consequences for chemistry of alkyl halides adsorbed on the surface of atmospheric aerosol particles.

Dissociation rate constants of human fibronectin binding to fibronectin-binding proteins on living Staphylococcus aureus isolated from clinical patients

Background: Cardiovascular implants can become infected with Staphylococcus aureus. Results: Receptor proteins on S. aureus form a multivalent cluster bond with fibronectin, a human protein that coats implants. Conclusion: A more resilient bond is associated with infections observed in vivo. Significance: Normal microbial flora could be screened prior to surgery to determine risk in patients receiving cardiovascular implants. Staphylococcus aureus is part of the indigenous microbiota of humans. Sometimes, S. aureus bacteria enter the bloodstream, where they form infections on implanted cardiovascular devices. A critical, first step in such infections is a bond that forms between fibronectin-binding protein (FnBP) on S. aureus and host proteins, such as fibronectin (Fn), that coat the surface of implants in vivo. In this study, native FnBPs on living S. aureus were shown to form a mechanically strong conformational structure with Fn by atomic force microscopy. The tensile acuity of this bond was probed for 46 bloodstream isolates, each from a patient with a cardiovascular implant. By analyzing the force spectra with the worm-like chain model, we determined that the binding events were consistent with a multivalent, cluster bond consisting of ∼10 or ∼80 proteins in parallel. The dissociation rate constant (koff, s−1) of each multibond complex was determined by measuring strength as a function of the loading rate, normalized by the number of bonds. The bond lifetime (1/koff) was two times longer for bloodstream isolates from patients with an infected device (1.79 or 69.47 s for the 10- or 80-bond clusters, respectively; n = 26 isolates) relative to those from patients with an uninfected device (0.96 or 34.02 s; n = 20 isolates). This distinction could not be explained by different amounts of FnBP, as confirmed by Western blots. Rather, amino acid polymorphisms within the Fn-binding repeats of FnBPA explain, at least partially, the statistically (p < 0.05) longer bond lifetime for isolates associated with an infected cardiovascular device.

A Tactile Response in Staphylococcus aureus

It is well established that bacteria are able to respond to temporal gradients (e.g., by chemotaxis). However, it is widely held that prokaryotes are too small to sense spatial gradients. This contradicts the common observation that the vast majority of bacteria live on the surface of a solid substrate (e.g., as a biofilm). Herein we report direct experimental evidence that the nonmotile bacterium Staphylococcus aureus possesses a tactile response, or primitive sense of touch, that allows it to respond to spatial gradients. Attached cells recognize their substrate interface and localize adhesins toward that region. Braille-like avidity maps reflect a cells biochemical sensory response and reveal ultrastructural regions defined by the actual binding activity of specific proteins.

Magnetosomes and magnetite crystals produced by magnetotactic bacteria as resolved by atomic force microscopy and transmission electron microscopy.

Atomic force microscopy (AFM) was used in concert with transmission electron microscopy (TEM) to image magnetotactic bacteria (Magnetospirillum gryphiswaldense MSR-1 and Magnetospirillum magneticum AMB-1), magnetosomes, and purified Mms6 proteins. Mms6 is a protein that is associated with magnetosomes in M. magneticum AMB-1 and is believed to control the synthesis of magnetite (Fe(3)O(4)) within the magnetosome. We demonstrated how AFM can be used to capture high-resolution images of live bacteria and achieved nanometer resolution when imaging Mms6 protein molecules on magnetite. We used AFM to acquire simultaneous topography and amplitude images of cells that were combined to provide a three-dimensional reconstructed image of M. gryphiswaldense MSR-1. TEM was used in combination with AFM to image M. gryphiswaldense MSR-1 and magnetite-containing magnetosomes that were isolated from the bacteria. AFM provided information, such as size, location and morphology, which was complementary to the TEM images.