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Featured researches published by Nicolas Taris.


Genetics Research | 2010

Variance in the reproductive success of flat oyster Ostrea edulis L. assessed by parentage analyses in natural and experimental conditions.

Delphine Lallias; Nicolas Taris; Pierre Boudry; François Bonhomme; Sylvie Lapegue

In order to document further the phenomena of variance in reproductive success in natural populations of the European flat oyster Ostrea edulis, two complementary studies based on natural and experimental populations were conducted. The first part of this work was focused on paternity analyses using a set of four microsatellite markers for larvae collected from 13 brooding females sampled in Quiberon Bay (Brittany, France). The number of individuals contributing as the male parent to each progeny assay was highly variable, ranging from 2 to more than 40. Moreover, paternal contributions showed a much skewed distribution, with some males contributing to 50-100% of the progeny assay. The second part of this work consisted of the analysis of six successive cohorts experimentally produced from an acclimated broodstock (62 wild oysters sampled in the Quiberon Bay). Allelic richness was significantly higher in the adult population than in the temporal cohorts collected. Genetic differentiation (F(st) estimates) was computed for each pair of samples and all significant values ranged from 0.7 to 11.9%. A limited effective number of breeders (generally below 25) was estimated in the six temporal cohorts. The study gives first indications of the high variance in reproductive success as well as a reduced effective size, not only under experimental conditions but also in the wild. Surprisingly, the pool of the successive cohorts, based on the low number of loci used, appeared to depict a random and representative set of alleles of the progenitor population, indicating that the detection of patterns of temporal genetic differentiation at a local scale most likely depends on the sampling window.


The Biological Bulletin | 2009

Mitochondrial and Nuclear DNA Analysis of Genetic Heterogeneity Among Recruitment Cohorts of the European Flat Oyster Ostrea edulis

Nicolas Taris; Pierre Boudry; François Bonhomme; Mark D. Camara; Sylvie Lapegue

Marine species with high fecundity and high early mortality may also have high variance in reproductive success among individuals due to stochastic factors, making successful reproduction a “sweepstakes.” In some cases, the impact is sufficient to reduce the effective number of breeders in wild populations. We tested two predictions of the sweepstakes reproductive success hypothesis in a French Atlantic population of the European flat oyster, Ostrea edulis, by evaluating (1) whether individuals belonging to temporally discrete recruitment cohorts within a single reproductive season displayed reduced genetic variation relative to the entire adult population, and (2) whether these temporal cohorts of recruits were genetically differentiated from each other. We assayed genetic variation at four nuclear microsatellites and a 12S mitochondrial fragment in four recruitment cohorts. Nuclear markers provided no evidence for differentiation between recruitment cohorts and adults or between temporal cohorts. However, mitochondrial data indicate that the first temporal cohort showed significant differentiation with the last (Fst = 0.052, P < 0.05) and with the adult sample (Fst = 0.058, P < 0.05). These differences are most likely due to the smaller effective size of the mitochondrial genome—and hence its increased sensitivity to drift compared to the nuclear genome. This slight mitochondrial signal indicates a certain limitation in the number of contributing female parents in this species. The “sweepstakes” phenomenon was therefore limited in our case. Hypothetically, this phenomenon may occur or not, with a high variance as a result of the interaction between the oyster reproductive biology and different environmental conditions.


Journal of Experimental Marine Biology and Ecology | 2006

Phenotypic and genetic consequences of size selection at the larval stage in the Pacific oyster (Crassostrea gigas)

Nicolas Taris; Bruno Ernande; Helen McCombie; Pierre Boudry


Aquaculture Research | 2005

A combined microsatellite multiplexing and boiling DNA extraction method for high throughput parentage analyses in the Pacific Oyster (Crassostrea gigas).

Nicolas Taris; Sophie Baron; Timothy F Sharbel; Christopher Sauvage; Pierre Boudry


Aquaculture | 2007

Evidence of response to unintentional selection for faster development and inbreeding depression in Crassostrea gigas larvae

Nicolas Taris; Frederico M. Batista; Pierre Boudry


Aquatic Living Resources | 2008

Comparative study of shell shape and muscle scar pigmentation in the closely related cupped oysters Crassostrea angulata, C. gigas and their reciprocal hybrids

Frederico M. Batista; Radhouan Ben-Hamadou; Vera G. Fonseca; Nicolas Taris; Francisco Ruano; Maria Armanda Reis-Henriques; Pierre Boudry


Bulletin of the Aquaculture Association of Canada | 2004

Genetic variability and selective breeding for traits of aquacultural interest in the Pacific oyster (Crassostrea gigas)

Pierre Boudry; Lionel Degremont; Nicolas Taris; Helen McCombie; Pierrick Haffray; Bruno Ernande


Diseases of Aquatic Organisms | 2005

Detection of ostreid herpesvirus-1 (OsHV-1) by PCR using a rapid and simple method of DNA extraction from oyster larvae.

Frederico M. Batista; Nicolas Taris; Pierre Boudry; Tristan Renault


6eme colloque national La Rochelle, 2- 4 octobre 2006 Les actes du colloque | 2006

Conséquences génétiques de la production de larves d'huîtres en écloserie : étude des processus de dérive et de sélection

Nicolas Taris; Christopher Sauvage; Frederico M. Batista; Sophie Baron; Bruno Ernande; Pierrick Haffray; Pierre Boudry


Aquaculture | 2007

Hybridization and morphological differences between the close related oyster taxa Crassostrea angulata and C. gigas

F.M. Batista; V.G. Fonseca; R. Ben Hamadou; Nicolas Taris; M.A. Henriques; Pierre Boudry

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Pierrick Haffray

Institut national de la recherche agronomique

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Frederico M. Batista

UPRRP College of Natural Sciences

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Frederico M. Batista

UPRRP College of Natural Sciences

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