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Featured researches published by Nivison Nery.


PLOS Neglected Tropical Diseases | 2016

Zika Virus Infection and Stillbirths: A Case of Hydrops Fetalis, Hydranencephaly and Fetal Demise.

Manoel Sarno; Gielson Almeida do Sacramento; Ricardo Khouri; do Rosário Ms; Federico Costa; Archanjo G; Santos La; Nivison Nery; Nikos Vasilakis; Albert I. Ko; de Almeida Ar

Background The rapid spread of Zika virus in the Americas and current outbreak of microcephaly in Brazil has raised attention to the possible deleterious effects that the virus may have on fetuses. Methodology/Principal Findings We report a case of a 20-year-old pregnant woman who was referred to our service after a large Zika virus outbreak in the city of Salvador, Brazil with an ultrasound examination that showed intrauterine growth retardation of the fetus at the 18th gestational week. Ultrasound examinations in the 2nd and 3rd trimesters demonstrated severe microcephaly, hydranencephaly, intracranial calcifications and destructive lesions of posterior fossa, in addition to hydrothorax, ascites and subcutaneous edema. An induced labor was performed at the 32nd gestational week due to fetal demise and delivered a female fetus. ZIKV-specific real-time polymerase chain reaction amplification products were obtained from extracts of cerebral cortex, medulla oblongata and cerebrospinal and amniotic fluid, while extracts of heart, lung, liver, vitreous body of the eye and placenta did not yield detectable products. Conclusions/Significance This case report provides evidence that in addition to microcephaly, there may be a link between Zika virus infection and hydrops fetalis and fetal demise. Given the recent spread of the virus, systematic investigation of spontaneous abortions and stillbirths may be warranted to evaluate the risk that ZIKV infection imparts on these outcomes.


PLOS Neglected Tropical Diseases | 2016

Spatiotemporal Determinants of Urban Leptospirosis Transmission: Four-Year Prospective Cohort Study of Slum Residents in Brazil

José E. Hagan; Paula Moraga; Federico Costa; Nicolas Capian; Guilherme S. Ribeiro; Elsio A. Wunder; Ridalva Dias Martins Felzemburgh; Renato Barbosa Reis; Nivison Nery; Francisco S. Santana; Deborah Bittencourt Mothé Fraga; Balbino L. dos Santos; Andréia C. Santos; Adriano Queiroz; Wagner Tassinari; Marilia Sá Carvalho; Mitermayer G. Reis; Peter J. Diggle; Albert I. Ko

Background Rat-borne leptospirosis is an emerging zoonotic disease in urban slum settlements for which there are no adequate control measures. The challenge in elucidating risk factors and informing approaches for prevention is the complex and heterogeneous environment within slums, which vary at fine spatial scales and influence transmission of the bacterial agent. Methodology/Principal Findings We performed a prospective study of 2,003 slum residents in the city of Salvador, Brazil during a four-year period (2003–2007) and used a spatiotemporal modelling approach to delineate the dynamics of leptospiral transmission. Household interviews and Geographical Information System surveys were performed annually to evaluate risk exposures and environmental transmission sources. We completed annual serosurveys to ascertain leptospiral infection based on serological evidence. Among the 1,730 (86%) individuals who completed at least one year of follow-up, the infection rate was 35.4 (95% CI, 30.7–40.6) per 1,000 annual follow-up events. Male gender, illiteracy, and age were independently associated with infection risk. Environmental risk factors included rat infestation (OR 1.46, 95% CI, 1.00–2.16), contact with mud (OR 1.57, 95% CI 1.17–2.17) and lower household elevation (OR 0.92 per 10m increase in elevation, 95% CI 0.82–1.04). The spatial distribution of infection risk was highly heterogeneous and varied across small scales. Fixed effects in the spatiotemporal model accounted for the majority of the spatial variation in risk, but there was a significant residual component that was best explained by the spatial random effect. Although infection risk varied between years, the spatial distribution of risk associated with fixed and random effects did not vary temporally. Specific “hot-spots” consistently had higher transmission risk during study years. Conclusions/Significance The risk for leptospiral infection in urban slums is determined in large part by structural features, both social and environmental. Our findings indicate that topographic factors such as household elevation and inadequate drainage increase risk by promoting contact with mud and suggest that the soil-water interface serves as the environmental reservoir for spillover transmission. The use of a spatiotemporal approach allowed the identification of geographic outliers with unexplained risk patterns. This approach, in addition to guiding targeted community-based interventions and identifying new hypotheses, may have general applicability towards addressing environmentally-transmitted diseases that have emerged in complex urban slum settings.


PLOS Pathogens | 2016

Cathelicidin Insufficiency in Patients with Fatal Leptospirosis

Janet C. Lindow; Elsio A. Wunder; Stephen J. Popper; Jin-Na Min; Praveen Mannam; Anup Srivastava; Yi Yao; Kathryn P. Hacker; Patty J. Lee; Ruth R. Montgomery; Albert C. Shaw; José E. Hagan; Guilherme C. Araújo; Nivison Nery; David A. Relman; Charles C. Kim; Mitermayer G. Reis; Albert I. Ko

Leptospirosis causes significant morbidity and mortality worldwide; however, the role of the host immune response in disease progression and high case fatality (>10–50%) is poorly understood. We conducted a multi-parameter investigation of patients with acute leptospirosis to identify mechanisms associated with case fatality. Whole blood transcriptional profiling of 16 hospitalized Brazilian patients with acute leptospirosis (13 survivors, 3 deceased) revealed fatal cases had lower expression of the antimicrobial peptide, cathelicidin, and chemokines, but more abundant pro-inflammatory cytokine receptors. In contrast, survivors generated strong adaptive immune signatures, including transcripts relevant to antigen presentation and immunoglobulin production. In an independent cohort (23 survivors, 22 deceased), fatal cases had higher bacterial loads (P = 0.0004) and lower anti-Leptospira antibody titers (P = 0.02) at the time of hospitalization, independent of the duration of illness. Low serum cathelicidin and RANTES levels during acute illness were independent risk factors for higher bacterial loads (P = 0.005) and death (P = 0.04), respectively. To investigate the mechanism of cathelicidin in patients surviving acute disease, we administered LL-37, the active peptide of cathelicidin, in a hamster model of lethal leptospirosis and found it significantly decreased bacterial loads and increased survival. Our findings indicate that the host immune response plays a central role in severe leptospirosis disease progression. While drawn from a limited study size, significant conclusions include that poor clinical outcomes are associated with high systemic bacterial loads, and a decreased antibody response. Furthermore, our data identified a key role for the antimicrobial peptide, cathelicidin, in mounting an effective bactericidal response against the pathogen, which represents a valuable new therapeutic approach for leptospirosis.


PLOS Neglected Tropical Diseases | 2017

Distinct antibody responses of patients with mild and severe leptospirosis determined by whole proteome microarray analysis

Carolina Lessa-Aquino; Janet C. Lindow; Arlo Randall; Elsio A. Wunder; Jozelyn Pablo; Rie Nakajima; Algis Jasinskas; Jaqueline S. Cruz; Alcinéia Oliveira Damião; Nivison Nery; Guilherme S. Ribeiro; Federico Costa; José E. Hagan; Mitermayer G. Reis; Albert I. Ko; Marco Alberto Medeiros; Philip L. Felgner

Background Leptospirosis is an important zoonotic disease worldwide. Humans usually present a mild non-specific febrile illness, but a proportion of them develop more severe outcomes, such as multi-organ failure, lung hemorrhage and death. Such complications are thought to depend on several factors, including the host immunity. Protective immunity is associated with humoral immune response, but little is known about the immune response mounted during naturally-acquired Leptospira infection. Methods and principal findings Here, we used protein microarray chip to profile the antibody responses of patients with severe and mild leptospirosis against the complete Leptospira interrogans serovar Copenhageni predicted ORFeome. We discovered a limited number of immunodominant antigens, with 36 antigens specific to patients, of which 11 were potential serodiagnostic antigens, identified at acute phase, and 33 were potential subunit vaccine targets, detected after recovery. Moreover, we found distinct antibody profiles in patients with different clinical outcomes: in the severe group, overall IgM responses do not change and IgG responses increase over time, while both IgM and IgG responses remain stable in the mild patient group. Analyses of individual patients’ responses showed that >74% of patients in the severe group had significant IgG increases over time compared to 29% of patients in the mild group. Additionally, 90% of IgM responses did not change over time in the mild group, compared to ~51% in the severe group. Conclusions In the present study, we detected antibody profiles associated with disease severity and speculate that patients with mild disease were protected from severe outcomes due to pre-existing antibodies, while patients with severe leptospirosis demonstrated an antibody profile typical of first exposure. Our findings represent a significant advance in the understanding of the humoral immune response to Leptospira infection, and we have identified new targets for the development of subunit vaccines and diagnostic tests.


Epidemiology and Infection | 2017

Factors affecting carriage and intensity of infection of Calodium hepaticum within Norway rats (Rattus norvegicus) from an urban slum environment in Salvador, Brazil.

Ruth Walker; Ticiana S. A. Carvalho-Pereira; Soledad Serrano; Gabriel G. Pedra; Kathryn P. Hacker; Josh Taylor; Amanda Minter; Arsinoê Cristina Pertile; Panti-May A; Mayara Carvalho; Fábio Neves Souza; Nivison Nery; Guilherme Riccioppo Rodrigues; Bahiense T; Mitermayer G. Reis; Albert Icksang Ko; James E. Childs; Michael Begon; Flávio Nogueira da Costa

Urban slum environments in the tropics are conducive to the proliferation and the spread of rodent-borne zoonotic pathogens to humans. Calodium hepaticum (Brancroft, 1893) is a zoonotic nematode known to infect a variety of mammalian hosts, including humans. Norway rats (Rattus norvegicus) are considered the most important mammalian host of C. hepaticum and are therefore a potentially useful species to inform estimates of the risk to humans living in urban slum environments. There is a lack of studies systematically evaluating the role of demographic and environmental factors that influence both carriage and intensity of infection of C. hepaticum in rodents from urban slum areas within tropical regions. Carriage and the intensity of infection of C. hepaticum were studied in 402 Norway rats over a 2-year period in an urban slum in Salvador, Brazil. Overall, prevalence in Norway rats was 83% (337/402). Independent risk factors for C. hepaticum carriage in R. norvegicus were age and valley of capture. Of those infected the proportion with gross liver involvement (i.e. >75% of the liver affected, a proxy for a high level intensity of infection), was low (8%, 26/337). Sixty soil samples were collected from ten locations to estimate levels of environmental contamination and provide information on the potential risk to humans of contracting C. hepaticum from the environment. Sixty percent (6/10) of the sites were contaminated with C. hepaticum. High carriage levels of C. hepaticum within Norway rats and sub-standard living conditions within slum areas may increase the risk to humans of exposure to the infective eggs of C. hepaticum. This study supports the need for further studies to assess whether humans are becoming infected within this community and whether C. hepaticum is posing a significant risk to human health.


PLOS Neglected Tropical Diseases | 2018

Prospective evaluation of accuracy and clinical utility of the Dual Path Platform (DPP) assay for the point-of-care diagnosis of leptospirosis in hospitalized patients

Scott A. Nabity; José E. Hagan; Guilherme C. Araújo; Alcinéia Oliveira Damião; Jaqueline S. Cruz; Nivison Nery; Elsio A. Wunder; Mitermayer G. Reis; Albert I. Ko; Guilherme S. Ribeiro

Early detection of leptospirosis with field-ready diagnostics may improve clinical management and mitigate outbreaks. We previously validated the point-of-care Dual Path Platform (DPP) for leptospirosis with sera in the laboratory. This prospective study compares the diagnostic accuracy and clinical utility of the DPP using finger stick blood (FSB) against the serum DPP, venous whole blood (VWB) DPP, IgM-ELISA, and clinical impression. We sequentially enrolled 98 patients hospitalized for acute febrile illnesses, of which we confirmed 32 by leptospirosis reference tests. Among syndromes consistent with classic leptospirosis, the FSB DPP showed similar sensitivity and specificity (Se 93% and Sp 80%), and positive and negative predictive values (PPV 74% and NPV 95%), to VWB DPP (Se 96%, Sp 75%, PPV 68%, and NPV 97%), serum DPP (Se 85%, Sp 87%, PPV 79%, and NPV 91%) and IgM-ELISA (Se 81%, Sp 100%, PPV 100%, and NPV 90%). The FSB DPP provided a favorable likelihood ratio profile (positive LR 4.73, negative LR 0.09) in comparison to other assays and clinical impression alone. Additionally, we identified four of five leptospirosis-associated meningitis patients by whole blood DPP, none of which clinicians suspected. This demonstrates potential for the DPP in routine detection of this less common syndrome. The FSB DPP demonstrated similar discrimination for severe human leptospirosis compared with serum assays, and it is a simpler option for diagnosing leptospirosis. Its performance in other epidemiological settings and geographic regions, and for detecting atypical presentations, demands further evaluation.


iberian conference on information systems and technologies | 2016

Classification model analysis for the prediction of leptospirosis cases

Nivison Nery; Daniela Barreiro Claro; Janet C. Lindow

Leptospirosis is a disease that affects mainly low-income populations, with an incidence of 500,000 cases per year worldwide[1]. The disease has symptoms often confused with other febrile syndromes, such as dengue, influenza and viral hepatitis. Improved diagnosis of patients with leptospirosis is very important for health professionals, epidemiological surveillance and primarily for rapid evaluation and appropriate treatment of patients. In this work, an analysis of the data mining techniques classification was performed, evaluating algorithms of the methods of Decision Tree, Classification Rules and Bayesian Classification. Of these, JRip was the model with the best performance, yielding 85% sensitivity and 81% specificity. The algorithms successfully predicted the disease and may represent a new tool to assist health professionals in the daily hospital routine, especially in endemic areas for leptospirosis, accelerating targeted treatment, and minimizing disease exacerbation and mortality.


PLOS Neglected Tropical Diseases | 2018

Fine-scale GPS tracking to quantify human movement patterns and exposure to leptospires in the urban slum environment.

Katharine A. Owers; Juliana Odetunde; Rosan B. de Matos; Gielson Almeida do Sacramento; Mayara Carvalho; Nivison Nery; Federico Costa; Mitermayer G. Reis; James E. Childs; José E. Hagan; Peter J. Diggle; Albert I. Ko

Background Human movement is likely an important risk factor for environmentally-transmitted pathogens. While epidemiologic studies have traditionally focused on household risk factors, individual movement data could provide critical additional information about risk of exposure to such pathogens. We conducted global positioning system (GPS) tracking of urban slum residents to quantify their fine-scale movement patterns and evaluate their exposures to environmental sources of leptospirosis transmission. Methodology/Principal findings We recruited participants from an ongoing cohort study in an urban slum in Brazil and tracked them for 24 hours at 30-second intervals. Among 172 subjects asked to participate in this cross-sectional study, 130 agreed to participate and 109 had good quality data and were included in analyses. The majority of recorded locations were near participant residences (87.7% within 50 meters of the house), regardless of age or gender. Similarly, exposure to environmental sources of leptospirosis transmission did not vary by age or gender. However, males, who have higher infection rates, visited a significantly larger area during the 24-hour period than did females (34,549m2 versus 22,733m2, p = 0.005). Four male participants had serologic evidence of Leptospira infection during the study period. These individuals had significantly larger activity spaces than uninfected males (61,310m2 vs 31,575m2, p = 0.006) and elevated exposure to rodent activity (p = 0.046) and trash deposits (p = 0.031). Conclusions/Significance GPS tracking was an effective tool for quantifying individual mobility in the complex urban slum environment and identifying risk exposures associated with that movement. This study suggests that in addition to source reduction, barrier interventions that reduce contact with transmission sources as slum residents move within their communities may be a useful prevention strategy for leptospirosis.


American Journal of Tropical Medicine and Hygiene | 2018

Seizures as a Complication of Congenital Zika Syndrome in Early Infancy

Jamary Oliveira-Filho; Daniele Freitas Henriques; Federico Costa; Adriana Mattos; Ridalva Dias Martins Felzemburgh; Nivison Nery; Albert I. Ko

Zika virus transmission in Brazil was linked to a large outbreak of microcephaly but less is known about longer term anthropometric and neurological outcomes. We studied a cohort of infants born between October 31, 2015, and January 9, 2016, in a state maternity hospital, followed up for 101 ± 28 days by home visits. Microcephaly (< 2 standard deviations, Intergrowth standard) occurred in 62 of 412 (15%) births. Congenital Zika syndrome (CZS) was diagnosed in 29 patients. Among CZS patients, we observed a significant gain in anthropometric measures (P < 0.001) but no significant gain in percentile for these measures. The main neurological outcome was epilepsy, occurring in 48% of infants at a rate of 15.6 cases per 100 patient-months, frequently requiring multiple anti-seizure medications. The cumulative fatality rate was 7.4% (95% confidence interval: 2.1-23.4%). Health-care professionals should be alerted on the high risk of epilepsy and death associated with CZS in early infancy and the need to actively screen for seizures and initiate timely treatment.


PLOS Pathogens | 2017

Correction: Cathelicidin Insufficiency in Patients with Fatal Leptospirosis.

Janet C. Lindow; Elsio A. Wunder; Stephen J. Popper; Jin-Na Min; Praveen Mannam; Anup Srivastava; Yi Yao; Kathryn P. Hacker; Patty J. Lee; Ruth R. Montgomery; Albert C. Shaw; José E. Hagan; Guilherme C. Araújo; Nivison Nery; David A. Relman; Charles C. Kim; Mitermayer G. Reis; Albert I. Ko

[This corrects the article DOI: 10.1371/journal.ppat.1005943.].

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Federico Costa

Federal University of Bahia

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