Norbert Holstein

A dated phylogeny and collection records reveal repeated biome shifts in the African genus Coccinia (Cucurbitaceae)

BackgroundConservatism in climatic tolerance may limit geographic range expansion and should enhance the effects of habitat fragmentation on population subdivision. Here we study the effects of historical climate change, and the associated habitat fragmentation, on diversification in the mostly sub-Saharan cucurbit genus Coccinia, which has 27 species in a broad range of biota from semi-arid habitats to mist forests. Species limits were inferred from morphology, and nuclear and plastid DNA sequence data, using multiple individuals for the widespread species. Climatic tolerances were assessed from the occurrences of 1189 geo-referenced collections and WorldClim variables.ResultsNuclear and plastid gene trees included 35 or 65 accessions, representing up to 25 species. The data revealed four species groups, one in southern Africa, one in Central and West African rain forest, one widespread but absent from Central and West African rain forest, and one that occurs from East Africa to southern Africa. A few individuals are differently placed in the plastid and nuclear (LFY) trees or contain two ITS sequence types, indicating hybridization. A molecular clock suggests that the diversification of Coccinia began about 6.9 Ma ago, with most of the extant species diversity dating to the Pliocene. Ancestral biome reconstruction reveals six switches between semi-arid habitats, woodland, and forest, and members of several species pairs differ significantly in their tolerance of different precipitation regimes.ConclusionsThe most surprising findings of this study are the frequent biome shifts (in a relatively small clade) over just 6 - 7 million years and the limited diversification during and since the Pleistocene. Pleistocene climate oscillations may have been too rapid or too shallow for full reproductive barriers to develop among fragmented populations of Coccinia, which would explain the apparently still ongoing hybridization between certain species. Steeper ecological gradients in East Africa and South Africa appear to have resulted in more advanced allopatric speciation there.

Integrating species distribution models (SDMs) and phylogeography for two species of Alpine Primula

The major intention of the present study was to investigate whether an approach combining the use of niche-based palaeodistribution modeling and phylo-geography would support or modify hypotheses about the Quaternary distributional history derived from phylogeographic methods alone. Our study system comprised two closely related species of Alpine Primula. We used species distribution models based on the extant distribution of the species and last glacial maximum (LGM) climate models to predict the distribution of the two species during the LGM. Phylogeographic data were generated using amplified fragment length polymorphisms (AFLPs). In Primula hirsuta, models of past distribution and phylogeographic data are partly congruent and support the hypothesis of widespread nunatak survival in the Central Alps. Species distribution models (SDMs) allowed us to differentiate between alpine regions that harbor potential nunatak areas and regions that have been colonized from other areas. SDMs revealed that diversity is a good indicator for nunataks, while rarity is a good indicator for peripheral relict populations that were not source for the recolonization of the inner Alps. In P. daonensis, palaeo-distribution models and phylogeographic data are incongruent. Besides the uncertainty inherent to this type of modeling approach (e.g., relatively coarse 1-km grain size), disagreement of models and data may partly be caused by shifts of ecological niche in both species. Nevertheless, we demonstrate that the combination of palaeo-distribution modeling with phylogeographical approaches provides a more differentiated picture of the distributional history of species and partly supports (P. hirsuta) and partly modifies (P. daonensis and P. hirsuta) hypotheses of Quaternary distributional history. Some of the refugial area indicated by palaeodistribution models could not have been identified with phylogeographic data.

Coccinia (Cucurbitaceae) gains two new species from East Africa, three new synonyms, and one new combination

SummaryWe describe and illustrate Coccinia pwaniensis Holstein from eastern Tanzania and southeast Kenya, and C. samburuensis Holstein from the Samburu area in Kenya. The new species were already recognised by Charles Jeffrey in 1967 and are now known from eight and four collections, respectively. Ongoing monographic work also revealed three new synonyms and the need for a new combination, Coccinia heterophylla (Hook. f.) Holstein.

Monograph of Coccinia (Cucurbitaceae)

Abstract This monograph deals with all 95 names described in the Cucurbitaceae genus Coccinia and recognizes 25 species. Taxonomic novelties are Coccinia adoensis var. aurantiaca (C.Jeffrey) Holstein, stat. nov., Coccinia sessilifolia var. variifolia (A.Meeuse) Holstein, stat. nov., and Coccinia adoensis var. jeffreyana Holstein, var. nov. For the 25 species 3157 collections were examined, of which 2024 were georeferenced to produce distribution maps. All species are distributed in sub-Saharan Africa with one species, Coccinia grandis, extending from Senegal in West Africa east to Indonesia and being naturalized on Pacific Islands, in Australia, the Caribbean, and South America. Coccinia species are dioecious creepers or climbers with simple or bifid tendrils that occupy a range of habitats from arid scrubland, woodlands to lowland rainforest and mist forest. The corolla of Coccinia species is sympetalous, usually pale yellow to orange, and 1 to 4.5 cm long. Pollination is by bees foraging for pollen or nectar. After pollination, the developing ovary often exhibits longitudinal mottling, which usually disappears during maturation. All species produce berries with a pericarp in reddish colors (orange-red through to scarlet red), hence the generic name. The globose to cylindrical fruits contain numerous grayish-beige flat to lenticular seeds. Chromosome numbers are 2n = 20, 24, and 22 + XX/XY. Many Coccinia species are used for food, either as roasted tubers, greens as spinach, or the fruits as vegetables. Medicinal value is established in Coccinia grandis, of which leaves and sap are used against diabetes.

Waking sleeping beauties: a molecular phylogeny and nomenclator of Halgania (Ehretiaceae, Boraginales)

Abstract. Halgania (Ehretiaceae, Boraginales) comprises ∼20 species of ericoid shrubs endemic to Australia. The current taxonomic concepts based on morphology are confusing and are sometimes based on misidentification or lack of information about the type material. We describe the morphological diversity and infer relationships using molecular phylogenetics. The five petals in all Halgania species are blue to violet (rarely white). The yellow or yellow-purple anthers are connected into a cone surrounding the single style. Differences among the species are mainly found in the indumentum of the plants, the leaf margin (i.e. degree of serration), the sepals (being either of equal or of unequal size) and the length of the beak-like anther appendages. A phylogenetic tree mainly based on ITS sequences retrieves three highly supported groups. The H. andromedifolia clade uniquely has sepals of unequal size, and the H. anagalloides clade exhibits dolabriform trichomes. The remaining taxa (constituting the H. littoralis clade) lack such diagnostic morphological traits, but are reliably retrieved as sister group to the H. anagalloides clade. As a first step towards the taxonomic revision of Halgania, we have compiled a nomenclatural list of all validly published names (at the species level and below), provide information about herbarium deposition of original material and discuss the current use of the names.