Oleg Konovalov

Interaction of antimicrobial peptide protegrin with biomembranes.

The antimicrobial peptide protegrin-1 (PG-1) interacts with membranes in a manner that strongly depends on membrane lipid composition. In this research we use an approach representing the outer layers of bacterial and red blood cell membranes with lipid monolayers and using a combination of insertion assay, epifluorescence microscopy, and surface x-ray scattering to gain a better understanding of antimicrobial peptides mechanism of action. We find that PG-1 inserts readily into anionic dipalmitoyl-phosphatidylglycerol, palmitoyl-oleoyl-phosphatidylglycerol, and lipid A films, but significantly less so into zwitterionic dipalmitoyl-phosphatidylcholine, palmitoyl-oleoyl-phosphatidylcholine, and dipalmitoyl-phosphatidylethanolamine monolayers under similar experimental conditions. Epifluorescence microscopy shows that the insertion of PG-1 into the lipid layer results in the disordering of lipid packing; this disordering effect is corroborated by grazing incidence x-ray diffraction data. X-ray reflectivity measurements further point to the location of the peptide in the lipid matrix. In a pathologically relevant example we show that PG-1 completely destabilizes monolayer composed of lipid A, the major component in the outer membrane of Gram-negative bacteria, which is likely to be the mechanism by which PG-1 disrupts the outer membrane, thus allowing it to reach the target inner membrane.

Electrochemical control of the conductivity in an organic memristor: a time-resolved X-ray fluorescence study of ionic drift as a function of the applied voltage.

Grazing-incidence X-ray fluorescence measurements were applied for a time-resolved study of an organic memristor conductivity variation mechanism. A comparison of these results with electrical measurements has allowed us to conclude that the variation of the fluorescence intensity of Rb ions is directly connected to the ionic charge transferred between the conducting polymer and the solid electrolyte, which made up the device. In addition, the conductivity of the memristor was shown to be a function of the transferred ionic charge.

Troika II: a versatile beamline for the study of liquid and solid interfaces

The Troika II beamline at the European Synchrotron Radiation Facility was conceived as a versatile beamline for the study of liquid and solid interfaces, combining grazing-incidence diffraction, X-ray reflectivity and grazing-incidence small-angle scattering in a single instrument. Scattering experiments can be performed both in horizontal and in vertical scattering geometry. Additional options are the use of analyzer crystals for high-resolution studies in both the horizontal and the vertical scattering geometry as well as the use of a horizontal microfocusing mirror for experiments requiring very high flux onto the sample. Here, the way in which the features of the beamline have been exploited in selected recent experiments is described.

Structural transitions in polydiacetylene Langmuir films.

Polydiacetylene (PDA) Langmuir films (LFs) were investigated directly at the air/water interface using in situ synchrotron grazing incidence X-ray diffraction, and ex situ transmissison electron microscopy and diffraction. The films were compressed and polymerized on pure water. A crystallographic model describes the structures and phase transitions of the unpolymerized (monomer) film, via the metastable (blue phase), to the fully stable PDA red phase as a function of irradiation dose. The monomer-to-blue-to-red chromatic phase transitions are accompanied by changes in the in-plane crystal structure and pendant chains packing arrangement from arced alkyl chains (in the monomer and blue phases) to near-vertical closely packed chains in the red phase. Notably, the characteristic linear strand morphology of PDA films can be explained as a direct result of the marked decrease in spacing between adjacent polymer chains upon transition from the blue to the red phase.

Quantitative determination of ion distributions in bacterial lipopolysaccharide membranes by grazing-incidence X-ray fluorescence

A model of the outer membrane of Gram-negative bacteria was created by the deposition of a monolayer of purified rough mutant lipopolysaccharides at an air/water interface. The density profiles of monovalent (K+) and divalent (Ca2+) cations normal to the lipopolysaccharides (LPS) monolayers were investigated using grazing-incidence X-ray fluorescence. In the absence of Ca2+, a K+ concentration peak was found in the negatively charged LPS headgroup region. With the addition of CaCl2, Ca2+ ions almost completely displaced K+ ions from the headgroup region. By integrating the experimentally reconstructed excess ion density profiles, we obtained an accurate measurement of the effective charge density of LPS monolayers. The experimental findings were compared to the results of Monte Carlo simulations based on a coarse-grained minimal model of LPS molecules and showed excellent agreement.

Interfacial growth of large-area single-layer metal-organic framework nanosheets

The air/liquid interface is an excellent platform to assemble two-dimensional (2D) sheets of materials by enhancing spontaneous organizational features of the building components and encouraging large length scale in-plane growth. We have grown 2D molecularly-thin crystalline metal-organic-framework (MOF) nanosheets composed of porphyrin building units and metal-ion joints (NAFS-13) under operationally simple ambient conditions at the air/liquid interface. In-situ synchrotron X-ray diffraction studies of the formation process performed directly at the interface were employed to optimize the NAFS-13 growth protocol leading to the development of a post-injection method –post-injection of the metal connectors into the water subphase on whose surface the molecular building blocks are pre-oriented– which allowed us to achieve the formation of large-surface area morphologically-uniform preferentially-oriented single-layer nanosheets. The growth of such large-size high-quality sheets is of interest for the understanding of the fundamental physical/chemical properties associated with ultra-thin sheet-shaped materials and the realization of their use in applications.

Calcium ions induce collapse of charged O-side chains of lipopolysaccharides from Pseudomonas aeruginosa

Lipopolysaccharide (LPS) monolayers deposited on planar, hydrophobic substrates were used as a defined model of outer membranes of Pseudomonas aeruginosa strain dps 89. To investigate the influence of ions on the (out-of-plane) monolayer structure, we measured specular X-ray reflectivity at high energy (22 keV) to ensure transmission through water. Electron density profiles were reconstructed from the reflectivity curves, and they indicate that the presence of Ca2+ ions induces a significant change in the conformation of the charged polysaccharide head groups (O-side chains). Monte Carlo simulations based on a minimal computer model of LPS molecules allow for the modelling of 100 or more molecules over 10−3 s and theoretically explained the tendency found by experiments.

Collagen containing microcapsules: smart containers for disease controlled therapy.

The protein collagen is the major component of connective tissue and it is involved in many biological functions. Its degradation is at the basis of different pathological processes. The up-regulated expression of matrix metalloproteinases and the down-regulated expression of their inhibitors are the causes for such degradation. The aim of this work was to evaluate the possibility to fabricate collagen based containers for drug encapsulation and release by cellular demand by the action of matrix metalloproteinases. In present work collagen type I based microcapsules were fabricated by means of the layer-by-layer assembly of oppositely charged collagen and poly (stirene sulfonate) onto colloidal particles, followed by removal of the cores to obtain hollow microcapsules. The process of shell growth on planar supports was monitored by quartz crystal microbalance. X-ray reflectivity measurements were carried out at the solid/water interface to study the interaction of matrix metalloproteinase 1 with LbL films of collagen. The morphology of hollow capsules was characterized by scanning electron microscopy, and compared to that of capsules exposed to the matrix metalloproteinase 1. Finally the matrix metalloproteinase 1 mediated permeability of capsules variation was studied by Confocal Laser Scanning Microscopy. The results demonstrated the possibility to fabricate a drug delivery system where the release of the drug is dependent on the biochemistry of the pathological state.

Reversible buckling in monolayer of gold nanoparticles on water surface

Formation of condensed films of nanoparticles having small ratio of metal-core-diameter to organic-shell-thickness is desired for several applications in nanotechnology. We report here results of a X-ray scattering study carried out to understand structure and morphology of monolayer of such nanoparticles having gold-core and thiol-shell directly on the water surface before the monolayer undergoes a continuous transition to a bilayer. Our results demonstrate buckling of the monolayer over a large surface pressure range (1 to 15 mN/m). The buckled state exhibits reversibility on decompression and can be annealed with temperature. We also show that condensed monolayer films of nanoparticles can be formed by annealing the buckled monolayer before transferring to solid substrates.

Gold Nanoparticles at the Liquid-Liquid Interface: X-ray Study and Monte Carlo Simulation

The behavior of mixed-ligand-coated gold nanoparticles at a liquid-liquid interface during compression has been investigated. The system was characterized by measuring pressure-area isotherms and by simultaneously performing in situ X-ray studies. Additionally, Monte Carlo (MC) simulations were carried out in order to interpret the experimental findings. With this dual approach it was possible to characterize and identify the different stages of compression and understand what happens microscopically: first, a compression purely in-plane, and, second, the formation of a second layer when the in-plane pressure pushes the particles out of the plane. The first stage is accompanied by the emergence of an in-plane correlation peak in the scattering signal and a strong increase of the pressure in the isotherm. The second stage is characterized by the weakening of the correlation peak and a slower increase in pressure.