Ori Green

Opening a Gateway for Chemiluminescence Cell Imaging: Distinctive Methodology for Design of Bright Chemiluminescent Dioxetane Probes

Chemiluminescence probes are considered to be among the most sensitive diagnostic tools that provide high signal-to-noise ratio for various applications such as DNA detection and immunoassays. We have developed a new molecular methodology to design and foresee light-emission properties of turn-ON chemiluminescence dioxetane probes suitable for use under physiological conditions. The methodology is based on incorporation of a substituent on the benzoate species obtained during the chemiexcitation pathway of Schaap’s adamantylidene–dioxetane probe. The substituent effect was initially evaluated on the fluorescence emission generated by the benzoate species and then on the chemiluminescence of the dioxetane luminophores. A striking substituent effect on the chemiluminescence efficiency of the probes was obtained when acrylate and acrylonitrile electron-withdrawing groups were installed. The chemiluminescence quantum yield of the best probe was more than 3 orders of magnitude higher than that of a standard, commercially available adamantylidene–dioxetane probe. These are the most powerful chemiluminescence dioxetane probes synthesized to date that are suitable for use under aqueous conditions. One of our probes was capable of providing high-quality chemiluminescence cell images based on endogenous activity of β-galactosidase. This is the first demonstration of cell imaging achieved by a non-luciferin small-molecule probe with direct chemiluminescence mode of emission. We anticipate that the strategy presented here will lead to development of efficient chemiluminescence probes for various applications in the field of sensing and imaging.

A Highly Efficient Chemiluminescence Probe for the Detection of Singlet Oxygen in Living Cells

Singlet oxygen is among the reactive oxygen species (ROS) with the shortest life-times in aqueous media because of its extremely high reactivity. Therefore, designing sensors for detection of 1 O2 is perhaps one of the most challenging tasks in the field of molecular probes. Herein, we report a highly selective and sensitive chemiluminescence probe (SOCL-CPP) for the detection of 1 O2 in living cells. The probe reacts with 1 O2 to form a dioxetane that spontaneously decomposes under physiological conditions through a chemiexcitation pathway to emit green light with extraordinary intensity. SOCL-CPP demonstrated promising ability to detect and image intracellular 1 O2 produced by a photosensitizer in HeLa cells during photodynamic therapy (PDT) mode of action. Our findings make SOCL-CPP the most effective known chemiluminescence probe for the detection of 1 O2 . We anticipate that our chemiluminescence probe for 1 O2 imaging would be useful in PDT-related applications and for monitoring 1 O2 endogenously generated by cells in response to different stimuli.

New Phenol Benzoate Cyanine Picolinium Salt Photoacid Excited-State Proton Transfer

Steady-state and time-resolved fluorescence techniques were employed to study the excited-state proton transfer (ESPT) to water and D2O of a new photoacid, phenol benzoate cyanine picolinium salt (BCyP). We found that the ground-state pKa is about 6.5, whereas the excited-state pKa* is about -4.5. The ESPT rate constant, kPT, to water is ∼0.5 × 1012s-1 (τPT ≈ 2 ps) and in D2O the rate is 0.33 × 1012 s-1. We determined that the BCyP photoacid belongs to the third regime of photoacids, the solvent-controlled regime.

Simple and cost-effective fluorescent labeling of 5-hydroxymethylcytosine

The nucleobase 5-hydroxymethylcytosine (5-hmC), a modified form of cytosine, is an important epigenetic mark related to regulation of gene expression. 5-hmC levels are highly dynamic during early development and are modulated during the progression of neurodegenerative disease and cancer. We describe a spectroscopic method for the global quantification of 5-hmC in genomic DNA. This method relies on the enzymatic glucosylation of 5-hmC, followed by a glucose oxidation step that results in the formation of aldehyde moieties that are covalently linked to a fluorescent reporter by oxime ligation. The fluorescence intensity of the labeled sample is directly proportional to its 5-hmC content. We show that this simple and cost-effective technique is suitable for quantification of 5-hmC content in different mouse tissues.

Chemiluminescent Probes for Activity-Based Sensing of Formaldehyde Released from Folate Degradation in Living Mice

Formaldehyde (FA) is a common environmental toxin that is also produced naturally in the body through a wide range of metabolic and epigenetic processes, motivating the development of new technologies to monitor this reactive carbonyl species (RCS) in living systems. Herein, we report a pair of first-generation chemiluminescent probes for selective formaldehyde detection. Caging phenoxy-dioxetane scaffolds bearing different electron-withdrawing groups with a general 2-aza-Cope reactive formaldehyde trigger provides chemiluminescent formaldehyde probes 540 and 700 (CFAP540 and CFAP700) for visible and near-IR detection of FA in living cells and mice, respectively. In particular, CFAP700 is capable of visualizing FA release derived from endogenous folate metabolism, providing a starting point for the use of CFAPs and related chemical tools to probe FA physiology and pathology, as well as for the development of a broader palette of chemiluminescent activity-based sensing (ABS) probes that can be employed from in vitro biochemical to cell to animal models.

Excited-State Proton Transfer and Formation of the Excited Tautomer of 3-Hydroxypyridine-Dipicolinium Cyanine Dye.

Steady-state and time-resolved fluorescence techniques and theoretical calculations were employed to study the photoprotolytic properties of a newly synthesized photoacid 3-hydroxypyridine-dipicolinium cyanine (HPPC) dye. This dye is similar to quinone cyanine 9, which we have previously studied and is the strongest photoacid currently synthesized. In this compound, we found that several proton transfer phenomena occur after excitation. We found that the excited-state proton transfer (ESPT) rate in water is ultrafast with kPT ≈ 1.5 × 10(12) s(-1). In methanol and ethanol the rate is slower by about 5 and 6 times, respectively. The fluorescence spectrum of HPPC in water consists of three bands with maxima at 520, 600, and 665 nm, whereas in monols and other protic solvents the fluorescence spectrum consists only of two emission bands at 530 and ∼700 nm. We assign the emission bands of HPPC at 520 nm to the protonated form and the 700 nm band in monols and 665 nm in water to the deprotonated form. The 600 nm band that is the most intense band in the fluorescence spectrum of HPPC in water we assign to the tautomeric form in which the proton is attached to the pyridines nitrogen atom. On the basis of density functional calculations, we suggest that in water the proton transfer process to the pyridines nitrogen atom occurs in a stepwise manner via a two water molecule bridge.

Excited-State Proton Transfer to H2O in Mixtures of CH3CN–H2O of a Superphotoacid, Chlorobenzoate Phenol Cyanine Picolinium (CBCyP)

Steady-state and time-resolved fluorescence techniques were employed to study a superphotoacid with a p Ka* of ∼-7, the chlorobenzoate phenol cyanine picolinium salt (CBCyP) in acetonitrile-water mixtures. We found that the time-resolved fluorescence is bimodal. The amplitude of the short-time component depends on χwater; the larger χwater, the greater the amplitude. We found that the excited-state proton-transfer (ESPT) rate constant, kPT, is ≥5 × 1012 s-1 in mixtures of χwater ≥ 0.08, whereas in neat water, kPT = 6 × 1012 s-1. The long-time component has a lifetime of 50 ps at χwater = 0.75. We attribute this time component to the CBCyP molecules that are not hydrogen-bonded to H2O clusters. The results suggest that the ESPT rate constant to water in acetonitrile-water mixtures depends only slightly on the water cluster size and structure surrounding the CBCyP molecule. We attribute the independence of the ESPT rate on the average water-cluster size to the large photoacidity of CBCyP. QM TD-DFT calculations found that in the excited-state the RO-(S1) species that is formed by the ESPT process is more stable than the ROH(S1) species by -5 kcal/mol when four water molecules accept the proton, and when six water molecules accept the proton, the RO-(S1) drops to -10 kcal/mol. The calculations show that energy stabilities are kept constant in implicit CH3CN-H2O solvent mixtures of dielectric constant of ε ≥ 45.