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Dive into the research topics where Partha Das is active.

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Featured researches published by Partha Das.


Immunobiology | 2013

115 kDa serine protease confers sustained protection to visceral leishmaniasis caused by Leishmania donovani via IFN-γ induced down-regulation of TNF-α mediated MMP-9 activity.

Rajdeep Choudhury; Partha Das; Tripti De; Tapati Chakraborti

Visceral leishmaniasis caused by the intracellular parasite Leishmania donovani is a major public health problem in the developing world. The emergence of increasing number of L. donovani strains resistance to antimonial drugs recommended worldwide requires the intervention of effective vaccine strategy for treatment of VL. In the present study L. donovani culture derived, soluble, secretory serine protease (pSP) has been shown to be vaccine target of VL. Protection from VL could be achieved by the use of safer vaccine which generally requires an adjuvant for induction of strong Th1 response. To assess the safety, immunogenicity and efficacy of pSP as vaccine candidate in mouse model we used IL-12 as adjuvant. BALB/c mice immunized with pSP+IL-12 were protected significantly from challenged infection even after four months by reducing the parasite load in liver and spleen and suppressed the development of the disease along with an increase in IgG2a antibody level in serum, enhanced delayed type hypersensitivity and strong T-cell proliferation. Groups receiving pSP+IL-12 had an augmented pSP antigen specific Th1 cytokines like IFN-γ and TNF-α response with concomitant decrease of Th2 cytokines IL-4 and IL-10 after vaccination. In this study the vaccine efficacy of pSP was further assessed for its prophylactic potential by enumerating matrix metalloprotease-9 (MMP-9) profile which has been implicated in various diseases. MMP-9 associated with different microbial infections is controlled by their natural inhibitors (TIMPS) and by some cytokines. In this study pSP was found to regulate excessive inflammation by modulating the balance between MMP-9 and TIMP-1 expression. This modulatory effect has also been demonstrated by IFN-γ mediated down regulation of TNF-α induced MMP-9 expression in activated murine macrophages. This is the first report where a secretory L. donovani serine protease (pSP) adjuvanted with IL-12 could also act as protective imunogen by modifying cytokine mediated MMP-9 expression in experimental VL. These findings elucidate the mechanisms of regulation of MMP-9 following infection of L. donovani in vaccinated animals and thus pave the way for developing new immunotherapeutic interventions for VL.


Clinical and Vaccine Immunology | 2010

In Situ Immunolocalization and Stage-Dependent Expression of a Secretory Serine Protease in Leishmania donovani and Its Role as a Vaccine Candidate

Rajdeep Choudhury; Partha Das; Siddhartha Kumar Bhaumik; Tripti De; Tapati Chakraborti

ABSTRACT Proteases have been found to play essential roles in many biological processes, including the pathogenesis of leishmaniasis. Most parasites rely on their intracellular and extracellular protease repertoire to invade and multiply in mammalian host cells. However, few studies have addressed serine proteases in Leishmania and their role in host pathogenesis. Here we report the intracellular distribution of a novel L. donovani secretory serine protease in the flagellar pocket, as determined by immunogold labeling. Flow cytometry and confocal immunofluorescence analysis revealed that the expression of the protease diminishes sequentially from virulent to attenuated strains of this species and is also highly associated with the metacyclic stage of L. donovani promastigotes. The level of internalization of parasites treated with the anti-115-kDa antibody into host macrophages was significantly reduced from that of non-antibody-treated parasites, suggesting that this serine protease probably plays a role in the infection process. In vivo studies confirmed that this serine protease is a potential vaccine candidate. Altogether, the 115-kDa serine protease might play vital roles in L. donovani pathogenesis and hence could be recognized as a potential candidate for drug design.


Biochimie | 2010

Immunolocalization and characterization of two novel proteases in Leishmania donovani: putative roles in host invasion and parasite development.

Rajdeep Choudhury; Partha Das; Tripti De; Tapati Chakraborti

Two novel intracellular proteases having identical molecular mass (58 kDa) were purified from virulent Indian strain of Leishmania donovani by a combination of aprotinin-agarose affinity chromatography, ion exchange chromatography and finally continuous elution electrophoresis. Both of these proteases migrate in SDS-PAGE as a single homogeneous bands suggesting monomeric nature of these proteases. The enzyme activity of one of the proteases was inhibited by serine protease inhibitor aprotinin and another one was inhibited by metalloprotease inhibitor 1, 10 phenanthroline. The purified enzymes were thus of serine protease (SP-Ld) and metalloprotease (MP-Ld) type. The optimal pH for protease activity is 8.0 and 7.5 for SP-Ld and MP-Ld respectively. The temperature optimum for SP-Ld is 28 °C and for MP-Ld is 37 °C showing their thermostability upto 60 °C. Broad substrate (both natural and synthetic) specificity and the effect of Ca2+ upon these enzymes suggested novelty of these proteases. Kinetic data indicate that SP-Ld is of trypsin like as BAPNA appears to be the best substrate and MP-Ld seems to be collagenase type as it degrades azocoll with maximum efficiency. Both immunofluorescence and immune-gold electron microscopy studies revealed that the SP-Ld is localized in the flagellar pocket as well as at the surface of the parasite, whereas MP-Ld is located extensively near the flagellar pocket region. This work also suggests that the uses of anti SP-Ld and anti MP-Ld antibodies are quite significant in interfering with the process of parasite invasion and multiplication respectively. Thus the major role of SP-Ld could be predicted in invasion process as it down regulates the phagocytic activity of macrophages, and MP-Ld appears to play important roles in parasitic development.


Archives of Biochemistry and Biophysics | 2009

Role of protein kinase C in NADPH oxidase derived O2*(-)-mediated regulation of KV-LVOCC axis under U46619 induced increase in [Ca2+]i in pulmonary smooth muscle cells.

Sajal Chakraborti; Animesh Chowdhury; Pulak Kar; Partha Das; Soni Shaikh; Soumitra Roy; Tapati Chakraborti

Treatment of bovine pulmonary smooth muscle cells with the TxA(2) mimetic, U46619 stimulated [Ca(2+)](i), which was inhibited upon pretreatment with apocynin (NADPH oxidase inhibitor). Pretreatment with cromakalim (K(V) channel opener) or nifedepine (L-VOCC inhibitor) inhibited U46619 induced increase in [Ca(2+)](i), indicating a role of K(V)-LVOCC axis in this scenario. Neither cromakalim nor nifedepine inhibited U46619 induced increase in NADPH oxidase activity, suggesting that the NADPH oxidase activation is proximal to the K(V)-LVOCC axis in the cells. Pretreatment with calphostin C (PKC inhibitor) markedly reduced U46619 induced increase in NADPH oxidase activity and [Ca(2+)](i) in the cells. Calphostin C pretreatment also markedly reduced p(47phox) phosphorylation and translocation to the membrane and association with p(22phox), a component of Cyt.b(558) of NADPH oxidase in the membrane. Overall, PKC plays an important role in NADPH oxidase derived O(2)(-)-mediated regulation of K(V)-LVOCC axis leading to an increase in [Ca(2+)](i) by U46619 in the cells.


Life Sciences | 2016

Identification and characterization of a Leishmania donovani serine protease inhibitor: Possible role in regulation of host serine proteases.

Nur Alam; Partha Das; Tripti De; Tapati Chakraborti

AIMS This study aims to identify, purify, and characterize an endogenous serine protease inhibitor from an Indian strain of Leishmania donovani, which causes the fatal visceral leishmaniasis. MAIN METHODS (i) Reverse zymography was used to identify the serine protease inhibitor by inhibiting the gelatinolytic activity of serine protease. (ii) Purification was performed by combining heat treatment, ultracentrifugation, and affinity and gel permeation chromatography. (iii) Spectrophotometric assays were conducted to quantify and compare the inhibitory activity of the L. donovani serine protease inhibitor (LdISP). (iv) Further, the protein was identified by matrix-assisted laser desorption/ionization (MALDI) time-of-flight (ToF) mass spectrometry (MS). KEY FINDINGS An endogenous inhibitor with an apparent molecular weight of 21.8 kDa, which is acidic in nature, having a pI of 5.9 was identified. The Ki value of the inhibitor for trypsin was determined to be in the nanomolar range. The protein has the following features: (i) ecotin-like nature, (ii) cross-organism functionality, that is, an inhibitory effect on the serine proteases of higher organisms other than its own, and (iii) homology with other such proteins from a different species of Leishmania on conducting protein mass fingerprinting after MALDI ToF MS. SIGNIFICANCE The inhibitor shows varying and entirely contrasting efficacies toward serine proteases of its own as well as of higher organisms. This indicates that it accelerates disease progression and drives parasite survival as it inhibits the activities of the host serine proteases.


Experimental Parasitology | 2014

In vitro anti-leishmanial efficacy of potato tuber extract (PTEx): leishmanial serine protease(s) as putative target.

Dibyendu Paik; Partha Das; Tripti De; Tapati Chakraborti

Leishmaniasis, a neglected tropical disease (NTD) causes major health problems in the tropical and subtropical world. Most of the antileishmanial modern therapies with different formulations of pentavalent antimonials, Miltefosine, Amphotericin B etc. are not satisfactory in recent times due to high toxicity to the host and present rising strain resistance issues. So there is an urgent need to develop new, safe and cost-effective drugs against leishmaniasis. In this regard, bioactive phytocomponents may lead to the discovery of new medicines with appropriate efficiency. The prominent roles played by Leishmania proteases in the virulence of this parasite make them very promising targets for the development of current therapeutics of leishmaniasis. As part of a search for novel drugs, we have evaluated in vitro anti-leishmanial activity of serine protease inhibitor rich fraction (PTEx) obtained from potato tuber. The extract (PTEx) was prepared by sodium bisulfite fractionation and inhibitors were identified by reverse zymography. Inhibition study of PTEx in gelatin-zymogram and spectrophotometric assay using BApNA and BTpNA as substrate reveal its strong inhibitory activity against trypsin as well as serine proteases present in cell lysate of Leishmania donovani infective strain. The in vitro MTT based colorimetric assay as well as ex vivo L. donovani infected macrophages showed reduced parasite viability and intracellular parasite load with IC50 = 312.5 ± 0.1 μg/ml and IC50 82.3 ± 0.2 μg/ml of PTEx respectively in a concentration dependent manner. This anti-leishmanial effect was also preceded by PTEx induced acute formation of ROS and prolonged NO generation. The PTEx has no significant cytotoxic effect on host macrophages. So taken together, these findings indicate that PTEx has promising leishmanicidal effect and thus this study provides a new perspective of natural serine protease inhibitor from potato tuber on the development of new drug against leishmaniasis.


Biomedicine & Pharmacotherapy | 2016

Protective inflammatory response against visceral leishmaniasis with potato tuber extract: A new approach of successful therapy

Dibyendu Paik; Partha Das; Kshudiram Naskar; Pijush Kanti Pramanik; Tapati Chakraborti

The increasing number of drug resistance issue of Leishmania donovani strain to common drugs compels to develop new therapeutics against leishmaniasis with minimal toxicity. In this regard, bioactive phytocomponents may lead to the discovery of new medicines with appropriate efficiency. The important roles of Leishmania proteases in the virulence of Leishmania parasite make them very hopeful targets for the improvement of current remedial of leishmaniasis. As part of a hunt for new drugs, we have evaluated in vivo anti-leishmanial activity of serine protease inhibitor rich fraction (PTEx), isolated by sodium bisulfite extraction from potato tuber. The amastigote load of 25mg/kg body weight/day treated BALB/c mice showed 86.9% decrease in liver and 88.7% in case of spleen. This anti-leishmanial effect was also supported by PTEx induced immunomodulatory activity like acute formation of ROS and prolonged NO generation. The Th1/Th2 cytokine balance in splenocytes of PTEx treated animals was estimated and evaluated by ELISA assay as well as by mRNA expression using RT-PCR. Furthermore, significant survival rate (80%) was observed in PTEx treated hamsters. Thus, from the present observations we could accentuate the potential of PTEx to be employed as a new therapeutics from natural source against L. donovani. This might also provide a novel perception of natural serine protease inhibitor from potato tuber as an alternate approach for the treatment of visceral leishmaniasis.


Archive | 2013

Proteases as Virulence Factors in Leishmania : Focus on Serine Proteases as Possible Therapeutic Targets

Partha Das; Nur Alam; Tripti De; Tapati Chakraborti

Leishmaniasis is one of the most assorted and intricate of all vector borne diseases caused by the genus Leishmania. Survival of Leishmania parasites inside the mammalian host needs a set of virulence factors, among them, Leishmania proteases have paramount importance. Several of these proteases have been identified as potential virulence factors for their crucial roles in the invasion of the host via parasite migration through tissue barriers, degradation of host proteins for nutrition purpose, immune evasion and activation of inflammation. Hence, the investigation on proteases in Leishmania is proposed as a valuable approach to enhance our knowledge on host-parasite interaction. Through various studies, a number of metalloproteases and cysteine proteases have been implicated as major components in host invasion by modulating host cell signaling for the establishment and continuation of infection by Leishmania. But, the roles of serine proteases in leishmaniasis have not been investigated adequately. In this review, we will discuss the significance of Leishmania proteases in parasite lifecycle and their possible accountability as a new drug target with special emphasis on Leishmania serine proteases.


Archive | 2017

Autophagic Proteases: Functional and Pathophysiological Aspects

Pijush Kanti Pramanik; Dibyendu Paik; Asmita Pramanik; Nur Alam; Partha Das; Tapati Chakraborti

Autophagy is a ubiquitous eukaryotic cellular process, in which cells degrade their own cytoplasmic components by hydrolases within the lysosome. Among many processes, the proteolytic processing of autophagy mediator protein Atg8 is catalyzed by a cysteine protease Atg4, to form Atg8—phosphatidylethanolamine (PE) conjugation, one of the most important step for autophagosome formation. Deconjugation of existing Atg8-PE is also catalyzed by Atg4 facilitates the release of Atg8 from the autophagosome membrane to recycle autophagy progression. Lysosomal hydrolases, familiar as cathepsins, divided into diverse number of enzyme subtypes namely cysteine, serine and aspartic proteases contribute to autophagy by catalyzing the cleavage of peptide bonds of autophagic substrates and thus help disposing the autophagic flux, albeit with the help of many other factors. Even though the cathepsins are implicated in autophagic processes, cathepsin A shows contrasting effect by reducing the rate of chaperone-mediated autophagy through proteolytic processing of lysosome-associated membrane protein type 2a (Lamp2a). Moreover, other families of proteases, such as calpains and caspases, may cleave autophagy-related proteins, negating the execution of autophagic processes. In this review, the overall focus is on the functional role of proteases in autophagy mainly, lysosomal hydrolases known as cathepsins, the cysteine protease Atg4 in yeast and the four orthologs of yeast protease Atg4 in mammalian system termed as “autophagins.” The present review also highlights the fundamental processes of autophagy including dysregulation of Atg4 protease in diverse pathological conditions such as cancer, cardiac diseases, neurodegenerative and infectious diseases. The overall approach of this article has also been extended with a view to emphasize on therapeutic strategies by targeting dysregulation of Atg4 protease associated with various diseases.


Microbes and Infection | 2017

Leishmania donovani serine protease encapsulated in liposome elicits protective immunity in experimental visceral leishmaniasis

Partha Das; Dibyendu Paik; Ksudiram Naskar; Tapati Chakraborti

This study is aimed to evaluate the protective effect of L. donovani intracellular serine protease (SP-Ld) in combination with Freunds adjuvant and liposomal formulations against experimental visceral leishmaniasis (VL). The animals were immunized with SP-Ld in combination with adjuvant and evaluated for its immunogenicity and protective efficacy against Leishmania donovani. The infection was initially assessed by microscopic examination. Immunogenicity of SP-Ld was measured by detecting protease specific-IgG, IgG1 and IgG2a levels by ELISA. Cytokines levels were measured by ELISA and Reverse Transcription Polymerase Chain Reaction (RT-PCR). The vaccine efficacy of SP-Ld was also evaluated by measuring antibody response and survival potency in hamster model. SP-Ld vaccinated Balb/c mice resulted significant reduction of parasite burden with increased levels of IgG2a and decreased levels of IgG1. SP-Ld vaccination also induced Th1 type immune response with the rise of IL-12, IFN-γ and TNF-α with decreased levels of IL-10 and TGF-β. Importantly, liposomal incorporated SP-Ld exerted better protection rather than in combination with Freunds adjuvant. Additionally, liposome encapsulated SP-Ld vaccinated hamsters continued to survive beyond 8 months against virulent L. donovani post challenge. Overall, these findings demonstrated SP-Ld as an effective immunogen which opens a new perspective for the generation of potential vaccine candidate against leishmaniasis.

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Tapati Chakraborti

Kalyani Government Engineering College

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Tripti De

Kalyani Government Engineering College

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Dibyendu Paik

Kalyani Government Engineering College

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Rajdeep Choudhury

Kalyani Government Engineering College

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Nur Alam

Kalyani Government Engineering College

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Asmita Pramanik

Kalyani Government Engineering College

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Pijush Kanti Pramanik

Kalyani Government Engineering College

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Sajal Chakraborti

Kalyani Government Engineering College

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Soumitra Roy

Kalyani Government Engineering College

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Animesh Chowdhury

Kalyani Government Engineering College

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