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Dive into the research topics where Patricia K. Schmieder is active.

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Featured researches published by Patricia K. Schmieder.


Environmental Toxicology and Chemistry | 2010

Adverse outcome pathways: A conceptual framework to support ecotoxicology research and risk assessment

Gerald T. Ankley; Richard S. Bennett; Russell J. Erickson; Dale J. Hoff; Michael W. Hornung; Rodney D. Johnson; David R. Mount; John W. Nichols; Christine L. Russom; Patricia K. Schmieder; Jose A. Serrrano; Joseph E. Tietge; Daniel L. Villeneuve

Ecological risk assessors face increasing demands to assess more chemicals, with greater speed and accuracy, and to do so using fewer resources and experimental animals. New approaches in biological and computational sciences may be able to generate mechanistic information that could help in meeting these challenges. However, to use mechanistic data to support chemical assessments, there is a need for effective translation of this information into endpoints meaningful to ecological risk-effects on survival, development, and reproduction in individual organisms and, by extension, impacts on populations. Here we discuss a framework designed for this purpose, the adverse outcome pathway (AOP). An AOP is a conceptual construct that portrays existing knowledge concerning the linkage between a direct molecular initiating event and an adverse outcome at a biological level of organization relevant to risk assessment. The practical utility of AOPs for ecological risk assessment of chemicals is illustrated using five case examples. The examples demonstrate how the AOP concept can focus toxicity testing in terms of species and endpoint selection, enhance across-chemical extrapolation, and support prediction of mixture effects. The examples also show how AOPs facilitate use of molecular or biochemical endpoints (sometimes referred to as biomarkers) for forecasting chemical impacts on individuals and populations. In the concluding sections of the paper, we discuss how AOPs can help to guide research that supports chemical risk assessments and advocate for the incorporation of this approach into a broader systems biology framework.


Toxicology and Applied Pharmacology | 1985

Absorption dynamics of organic chemical transport across trout gills as related to octanol-water partition coefficient

James M. McKim; Patricia K. Schmieder; G. Veith

An in vivo fish preparation was used that allowed a direct measure of the transport rates of 14 different organic chemicals across the gills of rainbow trout (Salmo gairdneri). The chemicals, all C14 labeled, were selected from five classes, encompassing a range of octanol-water partition coefficient (log P) values, from 0.23 (ethyl formate) to 7.5 (mirex). The uptake efficiency (extraction efficiency) of each chemical was determined by monitoring the inspired and expired water of trout exposed to each chemical over an exposure period of 1 to 6 hr. The mean gill extraction efficiency for all chemicals tested varied from a low of 7% to a high of 60%, extracted in a single pall of the chemical across the gills. The extraction efficiency of chemicals with log P or 1 or less were low and showed no relationship to log P. These low extraction efficiencies seen at log P of 1 and below with molecular weights below 100 were indicative of aqueous pore transport. The mean extraction efficiency for chemicals with log P values of 1 to 3 seemed to vary directly with log P, to a maximum of slightly greater than 60%, suggesting that uptake was controlled by the lipid membrane. The mean extraction efficiency for chemicals with log P of 3 to 6 was independent of log P and remained at 60%, which suggested that gill uptake was controlled by aqueous diffusion rates rather than gill membrane permeability. The mean extraction efficiency with mirex (log P = 7.5) decreased to 20%. This behavior was consistent with previous physical models which predict that high log P and melting point (low water solubility) may substantially reduce the rate of accumulation in fish. These studies support the passive diffusion model for the uptake of organics at the gill-water interface.


Environmental Toxicology and Chemistry | 2005

Comparison of relative binding affinities of endocrine active compounds to fathead minnow and rainbow trout estrogen receptors

Jeffrey S. Denny; Mark A. Tapper; Patricia K. Schmieder; Michael W. Hornung; Kathleen M. Jensen; Gerald T. Ankley; Tala R. Henry

Twelve chemicals were tested for binding affinity to rainbow trout liver estrogen receptor (rbtER) and fathead minnow liver ER (fhmER). The chemicals included estradiol (E2), diethylstilbestrol (DES), ethinylestradiol (EE2), estrone (El), estriol, tamoxifen (TAM), genistein (GEN), p-nonylphenol (PNP), p-tert-octylphenol (PTOP), methoxychlor (MXC), testosterone, and methyltestosterone (MT). Relative binding affinity (RBA) was calculated for each chemical as a function of E2 binding to the receptor. The estrogens DES, EE2, and E1 bound with high affinity to both receptors, with respective RBAs of 583, 166, and 28% (fathead minnow) and 179, 89, and 5% (rainbow trout). Relative binding affinity of E3, TAM, and GEN for both fhmER and rbtER were moderate, with values between 0.3 and 5%. The alkylphenols had weak affinity for the ERs with RBAs for the fhmER of 0.1 and 0.01 for PNP and PTOP, respectively. Corresponding values for the rbtER are 0.027 and 0.009. Estradiol ([3H]E2) only partially was displaced from both the fhmER and the rbtER by MXC, T, and MT. Comparison of RBAs of the chemicals tested for fhmER and rbtER indicates that the rank order of RBAs essentially are the same for both species.


Aquatic Toxicology | 1986

Toxicokinetic modeling of [14C]pentachlorophenol in the rainbow trout (Salmo gairdneri)

James M. McKim; Patricia K. Schmieder; Russell J. Erickson

Abstract An in vivo trout model was used to monitor the major routes and rates of pentachlorophenol uptake and elimination. Rainbow trout exposed to a mean sublethal water concentration (1.0 μg/l) of [14C]pentachlorophenol (PCP), a moderately lipophilic, relatively non-persistent environmental contaminant acquired a mean calculated dose of 230 μg/kg per 48 h and a mean measured dose of 212 μg/kg per 48 h. The rate constants determined for the calculated and measured doses were 5.0 ± 0.8 and 4.6 ± 1.1 l/kg per h, respectively. This close agreement between the calculated and measured doses and their rate constants provided further support for the use of this model system in aquatic toxicokinetic studies. A first-order kinetic model and observed data were used to generate fitted and predicted rate constants required for evaluation of first-order kinetics. The fitted first-order uptake-depuration curves for all experimental animals agreed with those observed suggesting first-order kinetics approximated the behavior of whole-body PCP burden. The predicted first-order uptake-depuration curve differed by a factor of 2–3 from that observed, due to the low predicted value used in the model for the steady-state PCP bioconcentration factor (BCF). A BCF of 460 was estimated from the first order simulation model developed from empirical data collected on uptake and elimination of PCP. The dosing time required to reach this steady-state BCF was 280 h. The estimated half-life ( T 1 2 ) was 65 h with approximately 50% eliminated over the gills, 30% in the feces and bile, and 20% in the urine. A depuration period of 280 h was required to eliminate 95% of the steady-state concentration of PCP. Approximately 43% of the 48-h dose of [14C]PCP remained in the major organs and muscle tissues of these trout at the end of the 96-h experiment. Of this amount, muscle contained 29% of the total remaining [14C]PCP equivalents while the remaining carcass contained 45% of the total remaining [14C]PCP. The PCP radiocarbon excreted in the urine was 10% PCP and 90% ‘other’ (metabolite/conjugate), while the bile was 45% PCP and 55% ‘other’ (metabolite/conjugate). PCP and its metabolites were rapidly eliminated from the bodies of fish, which provided for a low BCF. Efficient elimination of PCP should allow vertebrates to tolerate periodic low doses of PCP without toxic effects.


Environmental Toxicology and Chemistry | 2003

Quantitative structure‐activity relationship models for prediction of estrogen receptor binding affinity of structurally diverse chemicals

Patricia K. Schmieder; Gerald T. Ankley; Ovanes Mekenyan; John D. Walker; Steven P. Bradbury

The demonstrated ability of a variety of structurally diverse chemicals to bind to the estrogen receptor has raised the concern that chemicals in the environment may be causing adverse effects through interference with nuclear receptor pathways. Many structure-activity relationship models have been developed to predict chemical binding to the estrogen receptor as an indication of potential estrogenicity. Models based on either two-dimensional or three-dimensional molecular descriptions that have been used to predict potential for binding to the estrogen receptor are the subject of the current review. The utility of such approaches to predict binding potential of diverse chemical structures in large chemical inventories, with potential application in a tiered risk assessment scheme, is discussed.


Rapid Communications in Mass Spectrometry | 2000

Characterization of dansylated glutathione, glutathione disulfide, cysteine and cystine by narrow bore liquid chromatography/electrospray ionization mass spectrometry

Dean E. Hammermeister; Jose Serrano; Patricia K. Schmieder; Douglas W. Kuehl

A method using reversed phase high performance liquid chromatography/electrospray ionization-mass spectrometry (RP-LC/ESI-MS) has been developed to confirm the identity of dansylated derivatives of cysteine (C) and glutathione (GSH), and their respective dimers, cystine (CSSC) and glutathione disulfide (GSSG). Cysteine, GSH, CSSC and GSSG are present at low concentrations in rainbow trout (Oncorhynchus mykiss) liver cells. Initially, hepatic cells were sampled from a suspension culture and disrupted upon addition of 10% perchloric acid. The reduced thiols present in the cell extracts were acetylated to prevent dimerization and then the C and GSH species were derivatized with dansyl chloride for fluorescence detection. An LC system using a weak anion exchange column (AE) with fluorescence detection (FLD) was used for sensitive routine analysis; however, it produced peaks of unknown origin in addition to the expected analytes. Analytes were then separated on a C18 RP-LC system using a water/acetonitrile gradient with 0.2% formic acid, and detected using LC/ESI-MS at 3.5 KV which produced an intense ion with a minimum limit of detection of less than 0.5 pmole injected (>10:1 signal-to-noise (S/N). Subsequently, fractions of effluent from the AE-LC/FLD system were analyzed by LC/ESI-MS to confirm the presence of the target analytes in routine cell extracts. Monodansylated GSSG was identified as a product that could possibly affect the quantification of GSH and GSSG.


Pure and Applied Chemistry | 2003

QSAR prioritization of chemical inventories for endocrine disruptor testing

Patricia K. Schmieder; Ovanes Mekenyan; Steven P. Bradbury; Gilman D. Veith

Binding affinity between chemicals and the estrogen receptor (ER) serves as an indicator of the potential to cause endocrine disruption through this receptor-mediated endocrine pathway. Estimating ER-binding affinity is, therefore, one strategic approach to reducing the costs of screening chemicals for potential risks of endocrine disruption. While measuring ER binding with in vitro assays may be the first choice in prioritizing chemicals for additional in vitro or in vivo estrogenicity testing, the time and costs associated with screening thousands of chemicals is prohibitive. Recent advances in 3D modeling of the reactivity of flexible structures make in silico methods for estimating ER binding possible. One technique, the common reactivity pattern (COREPA) approach, was applied to development of reactivity patterns for ER relative binding affinity based on global nucleophilicity, interatomic distances between nucleophilic sites, and local electron donor capability of the nucleophilic sites. The reactivity patterns provided descriptor profiles for order-of-magnitude RBA ranges of training set chemicals. An exploratory expert system was subsequently developed to predict RBA and rank chemicals with respect to potential estrogenicity. A strategy is presented for extending initial exploratory 3D QSAR models beyond current training sets to increase applicability to more diverse structures in large chemical inventories.


Aquatic Toxicology | 2000

Optimization of a precision-cut trout liver tissue slice assay as a screen for vitellogenin induction: comparison of slice incubation techniques

Patricia K. Schmieder; Mark A. Tapper; A. Linnum; Jeffrey S. Denny; Richard C. Kolanczyk; Rodney D. Johnson

An in vitro male rainbow trout liver slice assay has been developed for long-term incubation of precision-cut slices for the detection of vitellogenin (VTG) protein induction in response to xenobiotic chemicals. The assay was optimized to allow 72 h of incubation of slices to maximize detection of VTG, while maintaining slice viability. Two methods of incubation frequently used with rat liver slices were compared: (1) slices were submerged in media (11 degrees C) and cultured in 12-well plates (PL) with continuous shaking; or (2) slices were floated onto titanium screens, placed into glass vials, and held under dynamic organ culture (DOC) conditions (11 degrees C). Slices (200 µm) in modified L-15 media were exposed to 1.0 µM 17beta-estradiol (E2) or diethylstilbestrol (DES). Protein from media and slice was sampled for Western blot analysis, using a polyclonal antibody to detect appearance of VTG protein. Maximum VTG was seen at 72 h, with detectable protein at 24 and 48 h in slices and media following PL incubation. In contrast, slices incubated in DOC showed little detectable VTG above background levels after 72 h. This difference was not attributable to protein loss to vial or plate surfaces. Standard viability assays did not reveal any differences between slices incubated in PL or DOC. However, histopathological examination revealed earlier and more severe vacuolization in slices incubated in DOC. Significantly more E2 uptake and conversion to water-soluble metabolites was noted in PL, compared with DOC, as well as more production of VTG in response to DES and E2, correlated with less histologic change. The in vitro assay described allows tissue-level assessment of estrogenicity in aquatic organisms, and will be useful for assessing not only comparative species receptor binding and transactivation, but also the role of tissue-specific activation factors in the estrogenic response of fish.


Comparative Biochemistry and Physiology Part C: Comparative Pharmacology | 1988

Plasma binding of 1-butanol, phenol, nitrobenzene and pentachlorophenol in the rainbow trout and rat: a comparative study.

Patricia K. Schmieder; Tala R. Henry

1. The in vitro binding of 1-butanol, phenol, nitrobenzene, and pentachlorophenol in trout plasma and rat plasma was determined. 2. Binding to rainbow trout plasma proteins agreed within 9% of that observed in rat plasma. 3. Percentage bound to rainbow trout (2-99%) or rat (10-99%) plasma proteins increased as the log octanol/water partition coefficient of the chemicals increased within the Log P 1-3 range, and was suggestive of hydrophobic interactions in binding.


Aquatic Toxicology | 2003

Effects of anesthesia (tricaine methanesulfonate, MS222) on liver biotransformation in rainbow trout (Oncorhynchus mykiss)

Richard C. Kolanczyk; Patrick N. Fitzsimmons; James M. McKim; Russell J. Erickson; Patricia K. Schmieder

The effect of tricaine methanesulfonate (MS222) on rainbow trout liver biotransformation rates was investigated with a microsomal model; an in vitro preparation that can be employed with or without the use of an anaesthetic. Two experimental sets of rainbow trout microsomes were tested; one representing in vivo or surgical tricaine exposures and the other representing in vitro tissue/organ collection tricaine exposures. Microsomal incubations were performed on these two experimental groups with phenol as substrate to assess the effects of tricaine on Phase I (ring-hydroxylation) and II (glucuronidation) liver biotransformation by monitoring production of hydroquinone (HQ), catechol (CAT), and phenylglucuronide (PG). The use of a 2-h 100 mg/l exposure of tricaine for surgical anesthesia with or without 24-h recovery did not significantly (P< or =0.05) affect rates of phenol (Phase I and II) biotransformation rates; nor, did the 5-min 300 mg/l tricaine exposure for isolated organ/tissue collection significantly (P< or =0.05) affect phenol (Phase I and II) biotransformation rates. There were also no significant statistical differences (P< or =0.05) in P450 protein levels, or 7-ethoxyresorufin-O-deethylase (EROD) activity in these microsomal assays between any of the tricaine treated rainbow trout and controls.

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Richard C. Kolanczyk

United States Environmental Protection Agency

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Gerald T. Ankley

United States Environmental Protection Agency

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Mark A. Tapper

United States Environmental Protection Agency

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Gilman D. Veith

United States Environmental Protection Agency

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Jeffrey S. Denny

United States Environmental Protection Agency

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Michael W. Hornung

United States Environmental Protection Agency

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Ovanes Mekenyan

Bulgarian Academy of Sciences

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Barbara R. Sheedy

United States Environmental Protection Agency

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James M. McKim

United States Environmental Protection Agency

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Russell J. Erickson

United States Environmental Protection Agency

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