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Dive into the research topics where Patrick Chomez is active.

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Featured researches published by Patrick Chomez.


Immunogenetics | 1994

Structure, Chromosomal Localization, and Expression of 12 Genes of the Mage Family

Etienne De Plaen; Catia Traversari; José J.J. Gaforio; Jean-Pierre Szikora; Charles De Smet; Francis Brasseur; Pierre van der Bruggen; Bernard Lethe; Christophe Lurquin; Patrick Chomez; Olivier De Backer; Thierry Boon; Karen C. Arden; Webster K. Cavenee; Robert Brasseur

We reported previously that human geneMAGE-1 directs the expression of a tumor antigen recognized on a melanoma by autologous cytolytic T lymphocytes. Probing cosmid libraries with aMAGE-1 sequence, we identified 11 closely related genes. The analysis of hamster-human somatic cell hybrids indicated that the 12MAGE genes are located in the q terminal region of chromosome X. LikeMAGE-1, the 11 additionalMAGE genes have their entire coding sequence located in the last exon, which shows 64%-85% identity with that ofMAGE-1. The coding sequences of theMAGE genes predict the same main structural features for allMAGE proteins. In contrast, the promoters and first exons of the12 MAGE genes show considerable variability, suggesting that the existence of this gene family enables the same function to be expressed under different transcriptional controls. The expression of eachMAGE gene was evaluated by reverse transcription and polymerase chain reaction amplification. Six genes of theMAGE family includingMAGE-1 were found to be expressed at a high level in a number of tumors of various histological types. None was expressed in a large panel of healthy tissues, with the exception of testis and placenta.


Cancer | 2001

MAGE‐A4, a germ cell specific marker, is expressed differentially in testicular tumors

Florence Aubry; Anne-Pascale Satie; Nathalie Rioux-Leclercq; Ewa Rajpert-De Meyts; Giulio C. Spagnoli; Patrick Chomez; Olivier De Backer; Bernard Jégou; Michel Samson

Testicular germ cell tumors are the most common malignancy in young males, and the frequency of these tumors has risen dramatically over the last century. Because it is known that the MAGE genes are expressed in a wide variety of tumors but are expressed only in the mitotic spermatogonia (germ cells) and in the primary spermatocytes in the normal testis, the authors screened the expression of MAGE‐A4 in a panel of testicular germ cell tumors.


Cancer Research | 2006

An Inducible Mouse Model of Melanoma Expressing a Defined Tumor Antigen

Ivo Huijbers; Paul Krimpenfort; Patrick Chomez; Martin van der Valk; Ji-Ying Song; Else-Marit Inderberg-Suso; Anne-Marie Schmitt-Verhulst; Anton Berns; Benoît Van den Eynde

Cancer immunotherapy based on vaccination with defined tumor antigens has not yet shown strong clinical efficacy, despite promising results in preclinical models. This discrepancy might result from the fact that available preclinical models rely on transplantable tumors, which do not recapitulate the long-term host-tumor interplay that occurs in patients during progressive tumor development and results in tumor tolerance. To create a faithful preclinical model for cancer immunotherapy, we generated a transgenic mouse strain developing autologous melanomas expressing a defined tumor antigen recognized by T cells. We chose the antigen encoded by P1A, a well-characterized murine cancer germ line gene. To transform melanocytes, we aimed at simultaneously activating the Ras pathway and inactivating tumor suppressor Ink4a/Arf, thereby reproducing two genetic events frequently observed in human melanoma. The melanomas are induced by s.c. injection of 4-OH-tamoxifen (OHT). By activating a CreER recombinase expressed from a melanocyte-specific promoter, this treatment induces the loss of the conditional Ink4a/Arf gene in melanocytes. Because the CreER gene itself is also flanked by loxP sites, the activation of CreER also induces the deletion of its own coding sequence and thereby allows melanocyte-specific expression of genes H-ras and P1A, which are located downstream on the same transgene. All melanomas induced in those mice with OHT show activation of the Ras pathway and deletion of gene Ink4a/Arf. In addition, these melanomas express P1A and are recognized by P1A-specific T lymphocytes. This model will allow to characterize the interactions between the immune system and naturally occurring tumors and thereby to optimize immunotherapy approaches targeting a defined tumor antigen.


FEBS Letters | 2001

Differential and opposed transcriptional effects of protein fusions containing the VP16 activation domain.

Christelle Matis; Patrick Chomez; Jacques J. Picard; René Rezsohazy

Overexpression of strong transcriptional activators like herpes simplex virion protein 16 (VP16) may lead to non‐specific inhibition of gene expression as a result of the titration of transcription factors. Here we report that a fusion between the homeoprotein Hoxa2 and the VP16 activation domain inhibits transcription from the strong promoter/enhancers of cytomegalovirus (CMV) and Rous sarcoma virus (RSV). A similar fusion involving a Hoxa2 mutant protein that is defective in DNA binding has no effect on the CMV promoter but increases, rather than inhibits, the RSV promoter activity. This suggests that depending on its ability to bind DNA, the VP16 activator can interact with different sets of cofactors, giving rise to distinct transcriptional effects.


Developmental Dynamics | 2004

Comparative Expression Analysis of the MAGED Genes During Embryogenesis and Brain Development

Mathieu J.M. Bertrand; Ivo Huijbers; Patrick Chomez; Olivier De Backer

The MAGED gene subfamily contains three genes in mouse and four in human. The MAGED1, D2, and D3 proteins are highly conserved between mouse and human, whereas paralogues are less conserved between each other. This finding suggests that each MAGED protein exerts a distinct function. To get a better insight into their physiological roles, we have analyzed their expression patterns during embryogenesis and brain development. In the mouse, Maged3 expression is restricted to the central nervous system where it was mostly detected in postmitotic neurons. Maged2 is mainly expressed in tissues of mesodermal origin. The expression pattern of Maged1 roughly summarizes that of Maged2 and Maged3; however, contrary to that of Maged3, it includes the proliferative zones of the nervous system. We observed a discrepancy between Maged1 expression levels of RNA and protein, suggesting that its expression is regulated at a posttranscriptional level during the mouse development. Developmental Dynamics 230:325–334, 2004.


Journal of Immunology | 2012

Minimal Tolerance to a Tumor Antigen Encoded by a Cancer-Germline Gene

Ivo Huijbers; Saïdi M. Soudja; Catherine Uyttenhove; Michel Buferne; Else-Marit Inderberg-Suso; Didier Colau; Luc Pilotte; Céline Powis de Tenbossche; Patrick Chomez; Francis Brasseur; Anne-Marie Schmitt-Verhulst; Benoît Van den Eynde

Central tolerance toward tissue-restricted Ags is considered to rely on ectopic expression in the thymus, which was also observed for tumor Ags encoded by cancer-germline genes. It is unknown whether endogenous expression shapes the T cell repertoire against the latter Ags and explains their weak immunogenicity. We addressed this question using mouse cancer-germline gene P1A, which encodes antigenic peptide P1A35–43 presented by H-2Ld. We made P1A-knockout (P1A-KO) mice and asked whether their anti-P1A35–43 immune responses were stronger than those of wild-type mice and whether P1A-KO mice responded to other P1A epitopes, against which wild-type mice were tolerized. We observed that both types of mice mounted similar P1A35–43-specific CD8 T cell responses, although the frequency of P1A35–43-specific CD8 T cells generated in response to P1A-expressing tumors was slightly higher in P1A-KO mice. This higher reactivity allowed naive P1A-KO mice to reject spontaneously P1A-expressing tumors, which progressed in wild-type mice. TCR-Vβ usage of P1A35–43-specific CD8 cells was slightly modified in P1A-KO mice. Peptide P1A35–43 remained the only P1A epitope recognized by CD8 T cells in both types of mice, which also displayed similar thymic selection of a transgenic TCR recognizing P1A35–43. These results indicate the existence of a minimal tolerance to an Ag encoded by a cancer-germline gene and suggest that its endogenous expression only slightly affects diversification of the T cell repertoire against this Ag.


Journal of Immunology | 2004

Thymocyte-Intrinsic Genetic Factors Influence CD8 T Cell Lineage Commitment and Affect Selection of a Tumor-Reactive TCR

Anil Shanker; Nathalie Auphan-Anezin; Patrick Chomez; Laurent Giraudo; Benoı̂t J. Van den Eynde; Anne-Marie Schmitt-Verhulst

Selection of immature CD4CD8 double-positive (DP) thymocytes for CD4 or CD8-lineage commitment is controlled by the interaction of the TCR with stromal cell-expressed peptide/MHC. We show that thymocyte-intrinsic genes influence the pattern of expression of a MHC class I-restricted transgenic (tg) TCR so that in DBA/2 mice, DP thymocytes with a characteristically high expression of tg TCR, infrequently transit to CD8 single-positive thymocytes. In contrast, in B10.D2 mice, the same tg TCR is expressed at lower levels on a subpopulation of DP thymocytes that more frequently transit to CD8 single-positive thymocytes. These characteristics were not influenced by thymic stromal components that control positive selection. Radiation chimeras reconstituted with a mixture of BM from tg TCR mice of the two genetic backgrounds revealed that the relative frequency of transit to the CD8 lineage remained thymocyte-intrinsic. Identifying the gene products whose polymorphism controls CD8 T cell development may shed new light on the mechanisms controlling T cell commitment/selection in mice other than the most studied “C57BL/6”-based strains.


Immunogenetics | 1992

Efficient expression of tum− antigen P91A by transfected subgenic fragments

Patrick Chomez; Etienne De Plaen; Aline Van Pel; Charles De Smet; Jean-Pierre Szikora; Christophe Lurquin; Anne-Marie Lebacq-Verheyden; Thierry Boon

Mutagen treatment of mouse P815 tumor cells produces immunogenic mutants that express new transplantation antigens (tum− antigens) recognized by cytolytic T cells. The gene encoding tum− antigen P91A comprises 12 exons and a mutation located in exon 4 is responsible for the production of a new antigenic peptide. Transfection experiments showed that the expression of the antigen could be transferred not only by the entire gene but also by gene segments comprising only the mutated exon and parts of the surrounding introns. This was observed with subgenic regions that were not cloned in expression vectors. Antigen expression did not require the integration of the transfected gene segment into a resident P91A gene by homologous recombination. It also occurred when the subgenic segment was transfected without the usual selective gene, which comprises an eucaryotic promoter, and also without plasmid sequences, which are known to contain weak promoters. When a stop codon was introduced at the beginning of exon 4, the expression of the antigen was maintained and evidence was obtained that an ATG codon located in this region served as initiation site for the translation of the antigenic peptide. But we have not obtained evidence indicating that antigenic peptides are direct translation products rather than degradation products of entire proteins.


Gene | 1994

Positive selection of recombinant plasmids based on the EcoK restriction activity of Escherichia coli K-12.

O. Debacker; Patrick Chomez; Etienne De Plaen

We have constructed a pTZ19R-derived vector which allows efficient positive selection of recombinant plasmids. The system uses the EcoK restriction activity of Escherichia coli K-12 to select against non-recombinant plasmids. The vector contains an EcoK site which, if deleted or disrupted by ligating a DNA fragment, yields recombinant plasmids that are no longer susceptible to EcoK restriction when transformed into a restriction-proficient E. coli host.


Science | 1991

A gene encoding an antigen recognized by cytolytic T lymphocytes on a human melanoma

P. van der Bruggen; Catia Traversari; Patrick Chomez; Christophe Lurquin; E De Plaen; B. Van den Eynde; A. Knuth; Thierry Boon

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Thierry Boon

Ludwig Institute for Cancer Research

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Christophe Lurquin

Ludwig Institute for Cancer Research

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Etienne De Plaen

Ludwig Institute for Cancer Research

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Benoît Van den Eynde

Ludwig Institute for Cancer Research

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Aline Van Pel

Ludwig Institute for Cancer Research

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Bernard Lethe

Ludwig Institute for Cancer Research

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Francis Brasseur

Ludwig Institute for Cancer Research

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Jean-Pierre Szikora

Catholic University of Leuven

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