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Dive into the research topics where Patrick D. Perkins is active.

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Featured researches published by Patrick D. Perkins.


Proteomics | 2009

Profile of Native N-linked Glycan Structures from Human Serum Using High Performance Liquid Chromatography on a Microfluidic Chip and Time-of-Flight Mass Spectrometry

Caroline S. Chu; Milady R. Niñonuevo; Brian H. Clowers; Patrick D. Perkins; Hyun Joo An; Hongfeng Yin; Kevin Killeen; Suzanne Miyamoto; Rudolf Grimm; Carlito B. Lebrilla

Protein glycosylation involves the addition of monosaccharides in a stepwise process requiring no glycan template. Therefore, identifying the numerous glycoforms, including isomers, can help elucidate the biological function(s) of particular glycans. A method to assess the diversity of the N‐linked oligosaccharides released from human serum without derivatization has been developed using on‐line nanoLC and high resolution TOF MS. The N‐linked oligosaccharides were analyzed with MALDI FT‐ICR MS and microchip LC MS (HPLC–Chip/TOF MS). Two microfluidic chips were employed, the glycan chip (40 nL enrichment column, 43×0.075 mm2 i.d. analytical column) and the high capacity chip (160 nL enrichment column, 140×0.075 mm2 i.d. analytical column), both with graphitized carbon as the stationary phase. Both chips offered good sensitivity and reproducibility in separating a heterogeneous mixture of neutral and anionic oligosaccharides between injections. Increasing the length and volume of the enrichment and the analytical columns improved resolution of the peaks. Complex type N‐linked oligosaccharides were the most abundant oligosaccharides in human serum accounting for ∼96% of the total glycans identified, while hybrid and high mannose type oligosaccharides comprise the remaining ∼4%.


Journal of Agricultural and Food Chemistry | 2008

Daily Variations in Oligosaccharides of Human Milk Determined by Microfluidic Chips and Mass Spectrometry

Milady R. Niñonuevo; Patrick D. Perkins; Jimi Francis; LaTasha M. Lamotte; Riccardo G. LoCascio; Samara L. Freeman; David A. Mills; J. Bruce German; Rudolf Grimm; Carlito B. Lebrilla


Rapid Communications in Mass Spectrometry | 2003

An atmospheric pressure matrix‐assisted laser desorption/ionization ion trap with enhanced sensitivity

Christine A. Miller; Patrick D. Perkins


Archive | 2005

Multimode ionization source and method for screening molecules

Patrick D. Perkins; Steven M. Fischer


Journal of Mass Spectrometry | 2006

Automated software-guided identification of new buspirone metabolites using capillary LC coupled to ion trap and TOF mass spectrometry

Anabel S. Fandiño; Edgar Nägele; Patrick D. Perkins


Archive | 2000

Ionization chamber for reactive samples

Patrick D. Perkins; Jeffrey T. Kernan


Archive | 2004

Super alloy ionization chamber for reactive samples

Patrick D. Perkins


Archive | 2000

Mask plate with lobed aperture

Jeffrey T. Kernan; Patrick D. Perkins


Journal of Agricultural and Food Chemistry | 2008

Dally variations in oligosaccharides of human milk determined by microfluidic chips and mass spectrometry (Journal of the Agricultural and Food Chemistry (2008) 56, (618))

Milady R. Niñonuevo; Patrick D. Perkins; Jimi Francis; LaTasha M. Lamotte; Riccardo G. LoCascio; Samara L. Freeman; David A. Mills; J. Bruce German; Rudolf Grimm; Carlito B. Lebrilla


Archive | 2007

APPARATUSES, METHODS AND COMPOSITIONS FOR IONIZATION OF SAMPLES AND MASS CALIBRANTS

Paul C. Goodley; Harry F. Prest; Christine A. Miller; Patrick D. Perkins

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David A. Mills

University of California

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