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Dive into the research topics where Patrick Ferreira is active.

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Featured researches published by Patrick Ferreira.


Nature Genetics | 2012

Mutations in CTC1, encoding conserved telomere maintenance component 1, cause Coats plus

Beverley Anderson; Paul R. Kasher; Josephine Mayer; Marcin Szynkiewicz; Emma M. Jenkinson; Sanjeev Bhaskar; Jill Urquhart; Sarah B. Daly; Jonathan E. Dickerson; James O'Sullivan; Elisabeth Oppliger Leibundgut; Joanne Muter; Ghada M H Abdel-Salem; Riyana Babul-Hirji; Peter Baxter; Andrea Berger; Luisa Bonafé; Janice E Brunstom-Hernandez; Johannes A Buckard; David Chitayat; Wk Chong; Duccio Maria Cordelli; Patrick Ferreira; Joel Victor Fluss; Ewan H. Forrest; Emilio Franzoni; Caterina Garone; Simon Hammans; Gunnar Houge; Imelda Hughes

Coats plus is a highly pleiotropic disorder particularly affecting the eye, brain, bone and gastrointestinal tract. Here, we show that Coats plus results from mutations in CTC1, encoding conserved telomere maintenance component 1, a member of the mammalian homolog of the yeast heterotrimeric CST telomeric capping complex. Consistent with the observation of shortened telomeres in an Arabidopsis CTC1 mutant and the phenotypic overlap of Coats plus with the telomeric maintenance disorders comprising dyskeratosis congenita, we observed shortened telomeres in three individuals with Coats plus and an increase in spontaneous γH2AX-positive cells in cell lines derived from two affected individuals. CTC1 is also a subunit of the α-accessory factor (AAF) complex, stimulating the activity of DNA polymerase-α primase, the only enzyme known to initiate DNA replication in eukaryotic cells. Thus, CTC1 may have a function in DNA metabolism that is necessary for but not specific to telomeric integrity.


Nature Genetics | 2016

Mutations in SNORD118 cause the cerebral microangiopathy leukoencephalopathy with calcifications and cysts

Emma M. Jenkinson; Mathieu P. Rodero; Paul R. Kasher; Carolina Uggenti; Anthony Oojageer; Laurence C. Goosey; Yoann Rose; Christopher J. Kershaw; Jill Urquhart; Simon G Williams; Sanjeev Bhaskar; James O'Sullivan; Monika Haubitz; Geraldine Aubert; Kristin Barañano; Angela Barnicoat; Roberta Battini; Andrea Berger; Edward Blair; Janice E. Brunstrom-Hernandez; Johannes A Buckard; David Cassiman; Rosaline Caumes; Duccio Maria Cordelli; Liesbeth De Waele; Alexander Fay; Patrick Ferreira; Nicholas A. Fletcher; Alan Fryer; Himanshu Goel

Although ribosomes are ubiquitous and essential for life, recent data indicate that monogenic causes of ribosomal dysfunction can confer a remarkable degree of specificity in terms of human disease phenotype. Box C/D small nucleolar RNAs (snoRNAs) are evolutionarily conserved non-protein-coding RNAs involved in ribosome biogenesis. Here we show that biallelic mutations in the gene SNORD118, encoding the box C/D snoRNA U8, cause the cerebral microangiopathy leukoencephalopathy with calcifications and cysts (LCC), presenting at any age from early childhood to late adulthood. These mutations affect U8 expression, processing and protein binding and thus implicate U8 as essential in cerebral vascular homeostasis.


Neurology | 2012

MRI as diagnostic tool in early-onset peroxisomal disorders

M.S. van der Knaap; Evangeline Wassmer; N.I. Wolf; Patrick Ferreira; M. Topçu; Ronald J. A. Wanders; Hans R. Waterham; Sacha Ferdinandusse

Objective: Peroxisomal blood tests are generally considered to be conclusive. We observed several patients with a clinical and MRI phenotype suggestive of an infantile onset peroxisomal defect, but no convincing abnormalities in initial peroxisomal blood tests. Brain MRI showed typical abnormalities as observed in the neonatal adrenoleukodystrophy variant of infantile peroxisomal disorders. Our aim was to evaluate the accuracy of this MRI diagnosis with further peroxisomal testing. Methods: We searched our database of unclassified leukoencephalopathies and found 6 such patients. We collected clinical data and scored available MRIs of these patients. We performed further peroxisomal studies in fibroblasts, including immunofluorescence microscopy analysis with antibodies against catalase, a peroxisomal matrix enzyme. We performed complementation analysis and analyzed the suspected genes. Results: We confirmed the diagnosis of Zellweger spectrum disorder in 3 patients and D-bifunctional protein deficiency in the others. The clinical findings were within the spectrum known for these diagnoses. Sequential MRIs showed that the abnormalities started in the hilus of the dentate nucleus and superior cerebellar peduncles. Subsequently, the cerebellar white matter and brainstem tracts were affected, followed by the parieto-occipital white matter, splenium of the corpus callosum, and posterior limb of the internal capsule. Eventually, all cerebral white matter became abnormal. The thalamus was typically affected as well. Conclusions: If MRI reveals abnormalities suggestive of infantile onset peroxisomal defects, negative peroxisomal blood tests do not exclude the diagnosis. Further tests in fibroblasts should be performed, most importantly immunofluorescence microscopy analysis with antibodies against catalase to stain peroxisomes.


Neuropediatrics | 2014

Leukoencephalopathy with calcifications and cysts: a purely neurological disorder distinct from coats plus.

John H. Livingston; Josephine Mayer; Emma M. Jenkinson; Paul R. Kasher; Stavros Stivaros; Andrea Berger; Duccio Maria Cordelli; Patrick Ferreira; Rosalind Jefferson; Georg Kutschke; Staffan Lundberg; Katrin Õunap; Prab Prabhakar; Calvin Soh; Helen Stewart; Jennifer Stone; Marjo S. van der Knaap; Hilda van Esch; Christine van Mol; Emma Wakeling; Andrea Whitney; Gillian I Rice; Yanick J. Crow

OBJECTIVE With the identification of mutations in the conserved telomere maintenance component 1 (CTC1) gene as the cause of Coats plus (CP) disease, it has become evident that leukoencephalopathy with calcifications and cysts (LCC) is a distinct genetic entity. PATIENTS AND METHODS A total of 15 patients with LCC were identified from our database of patients with intracranial calcification. The clinical and radiological features are described. RESULTS The median age (range) at presentation was 10 months (range, 2 days-54 years). Of the 15 patients, 9 presented with epileptic seizures, 5 with motor abnormalities, and 1 with developmental delay. Motor abnormalities developed in 14 patients and cognitive problems in 13 patients. Dense calcification occurred in the basal ganglia, thalami, dentate nucleus, brain stem, deep gyri, deep white matter, and in a pericystic distribution. Diffuse leukoencephalopathy was present in all patients, and it was usually symmetrical involving periventricular, deep, and sometimes subcortical, regions. Cysts developed in the basal ganglia, thalamus, deep white matter, cerebellum, or brain stem. In unaffected areas, normal myelination was present. No patient demonstrated cerebral atrophy. CONCLUSION LCC shares the neuroradiological features of CP. However, LCC is a purely neurological disorder distinguished genetically by the absence of mutations in CTC1. The molecular cause(s) of LCC has (have) not yet been determined.


Neuropediatrics | 2014

Leukoencephalopathy with calcifications and cysts

John H. Livingston; Josephine Mayer; Emma M. Jenkinson; Paul R. Kasher; Stavros Stivaros; Andrea Berger; Duccio Maria Cordelli; Patrick Ferreira; Rosalind Jefferson; Georg Kutschke; Staffan Lundberg; Katrin Õunap; Prab Prabhakar; Calvin Soh; Helen Stewart; Jennifer Stone; Marjo S. van der Knaap; Hilda van Esch; Christine van Mol; Emma Wakeling; Andrea Whitney; Gillian I. Rice; Yanick J. Crow

OBJECTIVE With the identification of mutations in the conserved telomere maintenance component 1 (CTC1) gene as the cause of Coats plus (CP) disease, it has become evident that leukoencephalopathy with calcifications and cysts (LCC) is a distinct genetic entity. PATIENTS AND METHODS A total of 15 patients with LCC were identified from our database of patients with intracranial calcification. The clinical and radiological features are described. RESULTS The median age (range) at presentation was 10 months (range, 2 days-54 years). Of the 15 patients, 9 presented with epileptic seizures, 5 with motor abnormalities, and 1 with developmental delay. Motor abnormalities developed in 14 patients and cognitive problems in 13 patients. Dense calcification occurred in the basal ganglia, thalami, dentate nucleus, brain stem, deep gyri, deep white matter, and in a pericystic distribution. Diffuse leukoencephalopathy was present in all patients, and it was usually symmetrical involving periventricular, deep, and sometimes subcortical, regions. Cysts developed in the basal ganglia, thalamus, deep white matter, cerebellum, or brain stem. In unaffected areas, normal myelination was present. No patient demonstrated cerebral atrophy. CONCLUSION LCC shares the neuroradiological features of CP. However, LCC is a purely neurological disorder distinguished genetically by the absence of mutations in CTC1. The molecular cause(s) of LCC has (have) not yet been determined.


Pediatric Blood & Cancer | 2016

Severe Congenital Protein C Deficiency: Practical Aspects of Management.

Ravi Shah; Patrick Ferreira; Shelina Karmali; Doan Le

Subcutaneous (SC) protein C (PC) was used in a child with purpura fulminans secondary to severe congenital PC deficiency. For maintenance, PC 80–120 IU/kg, given over 60–90 min SC Q48hr, has been successful as a home therapy for more than 3 years. The treatment was monitored by measuring trough PC chromogenic activity (target ≥15%) and D‐dimer levels. No change in clinical course was appreciated after discontinuing enoxaparin (and leaving the patient on prophylactic PC replacement alone). A significant discrepancy between clotting‐based and chromogenic‐based PC activity is shown.


Ophthalmic Genetics | 2017

Oculomotor apraxia and dilated cardiomyopathy with ataxia syndrome: A case report.

Matthew D. Benson; Patrick Ferreira; Ian M. MacDonald

ABSTRACT Dilated cardiomyopathy with ataxia syndrome (DCMA) is a rare mitochondrial condition associated with early onset cardiomyopathy and non-progressive ataxia. The cardiac manifestations may be progressive and often severe, resulting in significant morbidity and mortality. While optic nerve atrophy has been described in patients with DCMA, to our knowledge, there have been no reports of additional ocular phenotypes. We present two related Dariusleut Hutterite patients with documented DCMA syndrome and disorders of ocular motility: poor smooth pursuit and difficulty initiating saccadic eye movements and maintaining target fixation. We thus report the first cases of oculomotor apraxia in DCMA syndrome. By identifying these associated findings early in life, we hope to improve both the clinical diagnostic accuracy and timeliness of intervention in cases of DCMA.


American Journal of Medical Genetics Part A | 2017

Lin-Gettig syndrome: Craniosynostosis expands the spectrum of the KAT6B related disorders

Rani A. Bashir; Abhijit Dixit; Caitlin M Goedhart; Jillian S. Parboosingh; Allan Micheil Innes; Patrick Ferreira; Shabih U. Hasan; Ping-Yee B. Au

We report two patients with sagittal craniosynostosis, hypoplastic male genitalia, agenesis of the corpus callosum, thyroid abnormalities, and dysmorphic features which include short palpebral fissures and retrognathia. The clinical presentation of both patients was initially thought to be suggestive of Lin‐Gettig syndrome (LGS), a multiple malformation syndrome associated with craniosynostosis that was initially reported in two brothers in 1990, with a third patient reported in 2003. Our first patient was subsequently found through exome sequencing to have a de novo mutation in KAT6B, c.4572dupT, p.(Thr1525Tyrfs*16). The second patient was ascertained as possible LGS, but KAT6B mutation testing was pursued clinically after the identification of the KAT6B mutation in Patient 1, and identified a de novo mutation, c.4205_4206delCT, p.(Ser1402Cysfs*5). The phenotypic spectrum of KAT6B mutations has been expanding since identification of KAT6B mutations in genitopatellar syndrome (GPS) and Say Barber Biesecker Young Simpson (SBBYS) syndrome patients. We show that craniosynostosis, which has not been previously reported in association with KAT6B mutations, may be part of the genitopatellar/Say Barber Biesecker Young Simpson spectrum. These two patients also further demonstrate the overlapping phenotypes of genitopatellar and SBBYS syndromes recently observed by others. Furthermore, we propose that it is possible that one or more of the previous cases of LGS may have also been due to mutation in KAT6B, and that LGS may actually be a variant within the KAT6B spectrum and not a distinct clinical entity.


Archive | 2017

Irreversibility of Symptoms with Biotin Therapy in an Adult with Profound Biotinidase Deficiency

Patrick Ferreira; Alicia Chan; Barry Wolf

We report a 36-year-old woman who exhibited progressive optic atrophy at 13 years old, then stroke-like episodes and spastic diplegia in her 20s. Biotinidase deficiency was not readily considered in the differential diagnosis, and the definitive diagnosis was not made until pathological variants of the biotinidase gene (BTD) were found by exome sequencing. Profound biotinidase deficiency was confirmed by enzyme analysis. Unfortunately, her symptoms did not resolve or improve with biotin treatment. Biotin therapy is essential for all individuals with profound biotinidase deficiency and for preventing further damage in those who already exhibit irreversible neurological damage. Newborn screening for the disorder would have avoided years of clinical symptoms that now appear to be irreversible with biotin treatment.


Molecular genetics and metabolism reports | 2017

ALG9-CDG: New clinical case and review of the literature.

Kellie Davis; Duncan Webster; Christopher Smith; Sheryl Jackson; David Sinasac; Lorne E. Seargeant; Xing-Chang Wei; Patrick Ferreira; Julian P. Midgley; Yolanda Foster; Xueli Li; Miao He; Walla Al-Hertani

Congenital disorders of glycosylation (CDG) are a group of metabolic diseases resulting from defects in glycan synthesis or processing. The number of subgroups and their phenotypic spectrums continue to expand with most related to deficiencies of N-glycosylation. ALG9-CDG (previously CDG-IL) is the result of a mutation in ALG9. This gene encodes the enzyme alpha-1,2-mannosyltransferase. To date, a total of 10 patients from 6 different families have been reported with one of four ALG9 mutations. Seven of these patients had a similar phenotype with failure to thrive, dysmorphic features, seizures, hepatic and/or renal cysts; the other three patients died in utero from a lethal skeletal dysplasia. This report describes an additional patient with ALG9-CDG who has a milder phenotype. This patient is a term female born to Caucasian, Canadian, non-consanguineous parents of Scottish decent. Prenatally, dysmorphic features, numerous renal cysts and minor cardiac malformations were detected. Post-natally, dysmorphic features included shallow orbits, micrognathia, hypoplastic nipples, talipes equinovarus, lipodystrophy and cutis marmorata. She developed failure to thrive and seizures. The metabolic work-up included analysis of a transferrin isoelectric focusing, which showed a type 1 pattern. This was confirmed by glycan profiling, which identified ahomozygous mutation in ALG9, c.860A > G (p.Tyr287Cys) (NM_1234567890). This had been previously published as a pathogenic mutation in two Canadian patients. Our goal is to contribute to the growing body of knowledge for this disorder by describing the phenotypic spectrum and providing further insight on prognosis.

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Andrea Berger

Boston Children's Hospital

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Paul R. Kasher

University of Manchester

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Josephine Mayer

Manchester Academic Health Science Centre

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Sanjeev Bhaskar

Central Manchester University Hospitals NHS Foundation Trust

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Geraldine Aubert

University of British Columbia

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