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Dive into the research topics where Patrick T. Kelly is active.

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Featured researches published by Patrick T. Kelly.


Ecology | 2014

Terrestrial carbon is a resource, but not a subsidy, for lake zooplankton

Patrick T. Kelly; Christopher T. Solomon; Brian C. Weidel; Stuart E. Jones

Inputs of terrestrial organic carbon (t-OC) into lakes are often considered a resource subsidy for aquatic consumer production. Although there is evidence that terrestrial carbon can be incorporated into the tissues of aquatic consumers, its ability to enhance consumer production has been debated. Our research aims to evaluate the net effect of t-OC input on zooplankton. We used a survey of zooplankton production and resource use in ten lakes along a naturally occurring gradient of t-OC concentration to address these questions. Total and group-specific zooplankton production was negatively related to t-OC. Residual variation in zooplankton production that was not explained by t-OC was negatively related to terrestrial resource use (allochthony) by zooplankton. These results challenge the designation of terrestrial carbon as a resource subsidy; rather, the negative effect of reduced light penetration on the amount of suitable habitat and the low resource quality of t-OC appear to diminish zooplankton production. Our findings suggest that ongoing continental-scale increases in t-OC concentrations of lakes will likely have negative impacts on the productivity of aquatic food webs.


Methods in Enzymology | 2000

Properties of animal ceramide glycanases.

Manju Basu; Patrick T. Kelly; Mark Girzadas; Zhixiong Li; Subhash Basu

Publisher Summary Ceramide glycanase (CGase), the endoglycosidase that cleaves various glycosphingolipids in a one-step process liberating ceramide and the corresponding oligosaccharides, is characterized from different annelids, bacteria, and mollusk. The same CGase activity has also been detected and purified from mammalian sources. The discovery of the mammalian CGases raises the possibility of glycosphingolipids (GSLs) being involved in the signal transduction and/or apoptotic processes as a secondary messenger. The ceramide and its breakdown product sphingosine that is very much in the limelight of apoptosis and signal transduction cascades have so far been predicted to come from the breakdown of the major membrane lipid sphingomyelin by the action of sphingomyelinase. Substantial CGase activities have been observed in different mammalian organs, although the highest activity was found in the mammary tissues. A parallel between CGase activity and the gestation as well as lactation has also been observed. However, the significance of this observation has not been established as it was for bovine mammary glucosidase. CGase activities in the kidneys and the mammary tissues of newborn rats parallel that found in the lactating mammary tissue. This chapter discusses the study of CGase characterized from mammalian sources.


Environmental Monitoring and Assessment | 2018

Assessing uncertainty in annual nitrogen, phosphorus, and suspended sediment load estimates in three agricultural streams using a 21-year dataset

Patrick T. Kelly; Michael J. Vanni; William H. Renwick

Accurate estimation of constituent loads is important for studies of ecosystem mass balance or total maximum daily loads. In response, there has been an effort to develop methods to increase both accuracy and precision of constituent load estimates. The relationship between constituent concentration and stream discharge is often complicated, potentially leading to high uncertainty in load estimates for certain constituents, especially at longer-term (annual) scales. We used the loadflex R package to compare uncertainty in annual load estimates from concentration vs. discharge relationships in constituents of interest in agricultural systems, including ammonium as nitrogen (NH4-N), nitrate as nitrogen (NO3-N), soluble reactive phosphorus (SRP), and suspended sediments (SS). We predicted that uncertainty would be greatest in NO3-N and SS due to complex relationships between constituent concentration and discharge. We also predicted lower uncertainty with a composite method compared to regression or interpolation methods. Contrary to predictions, we observed the lowest uncertainty in annual NO3-N load estimates (relative error 1.5–23%); however, uncertainty was greatest in SS load estimates, consistent with predictions (relative error 19–96%). For all constituents, we also generally observed reductions in uncertainty by up to 34% using the composite method compared to regression and interpolation approaches, as predicted. These results highlight differences in uncertainty among different constituents and will aid in model selection for future studies requiring accurate and precise estimates of constituent load.


Inland Waters | 2017

Light climate and dissolved organic carbon concentration influence species-specific changes in fish zooplanktivory

Brian C. Weidel; Katherine Baglini; Stuart E. Jones; Patrick T. Kelly; Christopher T. Solomon; Jacob A. Zwart

Abstract Dissolved organic carbon (DOC) in lakes reduces light penetration and limits fish production in low nutrient lakes, reportedly via reduced primary and secondary production. Alternatively, DOC and light reductions could influence fish by altering their visual feeding. Previous studies report mixed effects of DOC on feeding rates of zooplanktivorous fish, but most investigators tested effects of a single concentration of DOC against clear-water, turbid, or algal treatments. We used a controlled laboratory study to quantify the effects of a DOC gradient (3–19 mg L−1) on average light climate and the zooplankton feeding rate of 3 common, north temperate fishes. Light availability, which was inversely related to DOC concentration, had a positive and linear effect on zooplankton consumption by juvenile largemouth bass (Micropterus salmoides) and bluegill (Lepomis macrochirus), explaining 22% and 28% of the variation in consumption, respectively. By contrast, zooplankton feeding rates by fathead minnow (Pimephales promelas) were best predicted by a nonlinear, negative influence of light (R2 = 0.13). In bluegill feeding trials we found a general trend for positive selection of larger zooplankton (Cladocera and Chaoboridae); however, the light climate did not influence the selection of prey type. Largemouth bass selected for larger-bodied zooplankton, with weak evidence that selectivity for large Cladocera changed from negative to neutral selection based on electivity values across the light gradient. Our results suggest that the effect of DOC on the light climate of lakes may directly influence fish zooplanktivory and that this influence may vary among fish species.


Ecosystems | 2018

A Framework for Understanding Variation in Pelagic Gross Primary Production of Lake Ecosystems

Patrick T. Kelly; Christopher T. Solomon; Jacob A. Zwart; Stuart E. Jones

Light and nutrient availability are key physiological constraints for primary production. Widespread environmental changes are causing variability in loads of terrestrial dissolved organic carbon (DOC) and nutrients from watersheds to lakes, contributing to simultaneous changes in both light and nutrient supply. Experimental evidence highlights the potential for these watershed loads to create complex and context-dependent responses of within-lake primary production; however, the field lacks a predictive model to investigate these responses. We embedded a well-established physiological model of phytoplankton growth within an ecosystem model of nutrient and DOC supply to assess how simultaneous changes in DOC and nutrient loads could impact pelagic primary production in lakes. The model generated a unimodal relationship between GPP and DOC concentration when loads of DOC and nutrients were tightly correlated across space or time. In this unimodal relationship, the magnitude of the peak GPP was primarily determined by the DOC-to-nutrient ratio of the load, and the location of the peak along the DOC axis was primarily determined by lake area. Greater nutrient supply relative to DOC load contributed to greater productivity, and larger lake area increased light limitation for primary producers at a given DOC concentration, owing to the positive relationship between lake area and epilimnion depth. When loads of DOC and nutrients were not tightly correlated in space or time, the model generated a wedge-shaped pattern between GPP and DOC, consistent with spatial surveys from a global set of lakes. Our model is thus capable of unifying the diversity of empirically observed spatial and temporal responses of lake productivity to DOC and mineral nutrient supply presented in the literature, and provides qualitative predictions for how lake pelagic primary productivity may respond to widespread environmental changes.


Oikos | 2015

Spatial stoichiometry: cross‐ecosystem material flows and their impact on recipient ecosystems and organisms

Judith Sitters; Carla L. Atkinson; Nils Guelzow; Patrick T. Kelly; Lauren L. Sullivan


Limnology and Oceanography | 2016

Metabolic and physiochemical responses to a whole-lake experimental increase in dissolved organic carbon in a north-temperate lake

Jacob A. Zwart; Nicola Craig; Patrick T. Kelly; Stephen D. Sebestyen; Christopher T. Solomon; Brian C. Weidel; Stuart E. Jones


Global Change Biology | 2016

Experimental whole-lake increase of dissolved organic carbon concentration produces unexpected increase in crustacean zooplankton density

Patrick T. Kelly; Nicola Craig; Christopher T. Solomon; Brian C. Weidel; Jacob A. Zwart; Stuart E. Jones


Limnology and Oceanography | 2018

Patterns and drivers of deep chlorophyll maxima structure in 100 lakes: The relative importance of light and thermal stratification

Taylor H. Leach; Beatrix E. Beisner; Cayelan C. Carey; Patricia Pernica; Kevin C. Rose; Yannick Huot; Jennifer A. Brentrup; Isabelle Domaizon; Hans-Peter Grossart; Bastiaan Willem Ibelings; Stéphan Jacquet; Patrick T. Kelly; James A. Rusak; Jason D. Stockwell; Dietmar Straile; Piet Verburg


Bioscience Reports | 1999

Ceramide Glycanase Activities in Human Cancer Cells

Manju Basu; Patrick T. Kelly; Peter O'Donnell; Maria Miguel; Mathew Bradley; Sandro Sonnino; Sipra Banerjee; Subhash Basu

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Brian C. Weidel

United States Geological Survey

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Jacob A. Zwart

University of Notre Dame

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Manju Basu

University of Notre Dame

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