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Featured researches published by Paul Hobby.


Journal of Immunology | 2002

Evidence for involvement of a hydrophobic patch in framework region 1 of human V4-34-encoded Igs in recognition of the red blood cell I antigen.

Kathleen N. Potter; Paul Hobby; Susanne Klijn; Freda K. Stevenson; Brian J. Sutton

The monoclonal IgM cold agglutinins that bind to the I/i carbohydrate Ags on the surface of RBCs all have Ig H chains encoded by the V4-34 gene segment. This mandatory use indicates that distinctive amino acid sequences may be involved in recognition. Critical amino acids exist in framework region 1 (FR1) of V4-34-encoded Ig, and these generate a specific Id determinant which apparently lies close to the I binding site. However, I binding by Id-expressing Ig can be modulated by sequences in complementarity-determining region (CDR)H3. Examination of the crystal structure of an anti-I cold agglutinin has revealed a hydrophobic patch in FR1 involving residue W7 on β-strand A and the AVY motif (residues 23–25) on β-strand B. In this study we used mutagenesis to show that each of the strand components of the hydrophobic patch is required for binding the I carbohydrate Ag. In addition, the crystal structure reveals that amino acids in the carboxyl-terminal region of CDRH3 form a surface region adjacent to the hydrophobic patch. We propose that the I carbohydrate Ag interacts simultaneously with the entire hydrophobic patch in FR1 and with the outside surface of CDRH3. This interaction could leave most of the conventional binding site available for binding other Ags.


Biochemical Journal | 2002

A novel immunoglobulin superfamily receptor (19A) related to CD2 is expressed on activated lymphocytes and promotes homotypic B-cell adhesion

John J. Murphy; Paul Hobby; Juan Vilarino-Varela; Benjamin Bishop; Panagiota Iordanidou; Brian J. Sutton; John D. Norton

A novel lymphocyte-specific immunoglobulin superfamily protein (19A) has been cloned. The predicted 335-amino-acid sequence of 19A represents a Type 1 membrane protein with homology with the CD2 family of receptors. A molecular model of the two predicted extracellular immunoglobulin-like domains of 19A has been generated using the crystal structure of CD2 as a template. In isolated lymphocytes, expression of 19A is induced by various activation stimuli, and enforced expression of the 19A gene promotes homotypic cell adhesion in a B-cell-line model. Collectively these data imply that the 19A protein plays a role in regulation of lymphocyte adhesion.


Clinical and Experimental Immunology | 2004

Evaluation of conformational epitopes on thyroid peroxidase by antipeptide antibody binding and mutagenesis

Monika Gora; Andrzej Gardas; W. Wiktorowicz; Paul Hobby; Philip F. Watson; Anthony P. Weetman; Brian J. Sutton; J. P. Banga

Autoantibodies to thyroid peroxidase (TPO) recognize predominantly conformational epitopes, which are restricted to two distinct determinants, termed immunodominant domain region (IDR) A and B. These dominant determinants reside in the region with structural homology to myeloperoxidase (MPO)‐like domain and may extend into the adjacent complement control protein (CCP) domain. We have explored the location of these determinants on the MPO‐like domain of the structural model of TPO, by identifying exposed hydrophilic loops that are potential candidates for the autoantigenic sites, generating rabbit antipeptide antisera, and competing with well characterized murine monoclonal antibodies (mabs) specific for these two IDRs. We recently defined the location of IDR‐B, and here report our findings on the location of IDR‐A and its relationship to IDR‐B, defined with a new panel of 15 antipeptide antisera. Moreover, in combination with single amino acid replacements by in vitro mutagenesis, we have defined the limits of the IDR‐B region on the TPO model. The combination of antisera to peptides P12 (aa 549–563), P14 (aa 599–617) and P18 (aa 210–225) inhibited the binding of the mab specific for IDR‐A (mab 2) by 75%. The same combination inhibited the binding of autoantibodies to native TPO from 67 to 94% (mean 81·5%) at autoantibody levels of 5 IU. Fabs prepared from the antipeptide IgG and pooled in this combination were also effective in competition assays, thus defining the epitopes more precisely. IDR‐A was found to lie immediately adjacent to IDR‐B and thus the two immunodominant epitopes form an extended patch on the surface of TPO. Finally, by single amino acid mutagenesis, we show that IDR‐B extends to residue N642, thus further localizing the boundary of this autoantigenic region on the structural model.


Journal of Autoimmunity | 1991

A role for DNA in anti-DNA antibodies binding to endothelial cells

Geoffrey Frampton; Paul Hobby; Adrienne Morgan; Norman A. Staines; J. Stewart Cameron

Vascular injury and microvascular thrombosis are prominent features of systemic lupus erythematosus, as are circulating DNA-binding antibodies (DNAb). Experimental glomerulonephritis can be induced by anti-endothelial cell antibodies, and polyreactive DNAb might be pathogenetic by binding to endothelial cells, perhaps influencing their non-thrombogenic nature. To test this hypothesis, eight monoclonal antibodies (mAb) that bind to DNA derived from (NZB x NZW)F1 or MRL/Mp-lpr/lpr mice, were tested for their ability to bind to human umbilical vein endothelial cells (HUVEC). Binding was assessed using flow cytometry, fluorescence microscopy and cellular ELISA. Three of the eight mAb, at concentrations employed in this study, bound to HUVEC and dermal fibroblasts. Of these three mAb, one bound also to platelets. Two of the three demonstrated strong binding to (1) freshly isolated, collagenase-digested HUVEC, (2) 2nd passage HUVEC in suspension after trypsinization and, (3) 2nd passage HUVEC growing on plastic plates. To determine whether DNA itself acted as a ligand in this binding, prior treatment with DNAase was studied. Treatment of the endothelial cells with DNAase had no effect on the binding of one mAb, but DNAase treatment of this monoclonal itself resulted in a 60% reduction in binding to HUVEC, suggesting that the binding might be mediated through DNA in the form of a DNA/anti-DNA immune complex. In contrast, DNAase digestion of the endothelial cells caused a 40% reduction in the binding of the other two monoclonal antibodies. Furthermore, one of the two mAb bound 30% more to HUVEC after themselves being subjected to DNAase treatment. These two monoclonals may therefore be binding directly to HUVEC, possibly to DNA associated with the membrane. Prior DNAase digestion of dermal fibroblasts had a more profound effect on the binding of all three autoantibodies compared to HUVEC after similar treatment. Therefore, DNA can bind independently to either antibody or cell, thus supporting build up of complexes and capture of preformed complexes. Functionally, the binding of mAb to HUVEC did not influence thrombin-induced prostacyclin synthesis, in contrast to a control monoclonal anti-endothelial cell antibody EN4, which did.


Science | 2001

Regulation of Cutaneous Malignancy by γδ T Cells

Michael Girardi; David E. Oppenheim; Carrie R. Steele; Julia M. Lewis; Earl J. Glusac; Renata B. Filler; Paul Hobby; Brian J. Sutton; Robert E. Tigelaar; Adrian Hayday


Endocrinology | 2000

Identification of an Immunodominant Region Recognized by Human Autoantibodies in a Three-Dimensional Model of Thyroid Peroxidase

Paul Hobby; Andrzej Gardas; Roman Radomski; Alan M. McGregor; J. Paul Banga; Brian J. Sutton


The Journal of Allergy and Clinical Immunology | 2005

Biased use of VH5 IgE-positive B cells in the nasal mucosa in allergic rhinitis

Heather A. Coker; Helen E. Harries; G. Banfield; Victoria A. Carr; Stephen R. Durham; Elfy B Chevretton; Paul Hobby; Brian J. Sutton; Hannah J. Gould


Infection and Immunity | 1992

A 34- to 38-kilodalton Cryptococcus neoformans glycoprotein produced as an exoantigen bearing a glycosylated species-specific epitope.

Andrew J. Hamilton; L. Jeavons; Paul Hobby; R.J. Hay


Molecular Immunology | 2008

Remarkable selective glycosylation of the immunoglobulin variable region in follicular lymphoma

Katy J. McCann; Christian Ottensmeier; Alice Callard; Catherine M. Radcliffe; David J. Harvey; Raymond A. Dwek; Pauline M. Rudd; Brian J. Sutton; Paul Hobby; Freda K. Stevenson


Gene | 2001

Molecular cloning, phylogenetic analysis and three-dimensional modeling of Cu,Zn superoxide dismutase ( CnSOD1 ) from three varieties of Cryptococcus neoformans

Sudha Chaturvedi; Andrew J. Hamilton; Paul Hobby; Guan Zhu; Charles V. Lowry; Vishnu Chaturvedi

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