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Dive into the research topics where Pavel Matula is active.

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Featured researches published by Pavel Matula.


Nucleus | 2015

Localized movement and morphology of UBF1-positive nucleolar regions are changed by γ-irradiation in G2 phase of the cell cycle

Dmitry Sorokin; Lenka Stixová; Petra Sehnalová; Soňa Legartová; Jana Suchánková; Pavel Šimara; Stanislav Kozubek; Pavel Matula; Magdalena Skalníková; Ivan Raška; Eva Bártová

The nucleolus is a well-organized site of ribosomal gene transcription. Moreover, many DNA repair pathway proteins, including ATM, ATR kinases, MRE11, PARP1 and Ku70/80, localize to the nucleolus (Moore et al., 2011). We analyzed the consequences of DNA damage in nucleoli following ultraviolet A (UVA), C (UVC), or γ-irradiation in order to test whether and how radiation-mediated genome injury affects local motion and morphology of nucleoli. Because exposure to radiation sources can induce changes in the pattern of UBF1-positive nucleolar regions, we visualized nucleoli in living cells by GFP-UBF1 expression for subsequent morphological analyses and local motion studies. UVA radiation, but not 5 Gy of γ-rays, induced apoptosis as analyzed by an advanced computational method. In non-apoptotic cells, we observed that γ-radiation caused nucleolar re-positioning over time and changed several morphological parameters, including the size of the nucleolus and the area of individual UBF1-positive foci. Radiation-induced nucleoli re-arrangement was observed particularly in G2 phase of the cell cycle, indicating repair of ribosomal genes in G2 phase and implying that nucleoli are less stable, thus sensitive to radiation, in G2 phase.


Archive | 2007

Estimating Large Local Motion in Live-Cell Imaging UsingVariational Optical Flow

Jan Hubený; Vladimír Ulman; Pavel Matula


Archive | 2010

Acquiarium: Free Software For Image Acquisition And ImageAnalysis In Cytometry

Pavel Matula; Ondřej Daněk; Martin Maška; Marek Vinkler; Michal Kozubek


Archive | 2016

Genomic Stability of the Cells during hiPSC Reprogramming andEndothelial Differentiation

Pavel Šimara; Lenka Tesařová; Daniela Řeháková; Pavel Matula; Irena Krontorád Koutná


Archive | 2015

Derivation of human induced pluripotent stem cells and AdvancedMethods of Image Processing

Irena Krontorád Koutná; Pavel Šimara; Pavel Matula; Lenka Tesařová; Barbara Šalingová


Archive | 2010

Alteration in mitochondrial superoxide production by shRNA genesilencing of AIF in various cell lines

Miroslav Vařecha; Daniela Páclová; Jiřina Procházková; Pavel Matula; Michal Kozubek


Archive | 2010

A novel approach to evaluation of the spatial relationship offluorescent signals in ImunnoFISH analysis of different kind.

Stanislav Stejskal; Pavel Matula; Ondřej Daněk; Martin Maška; Irena Krontorád Koutná; Michal Kozubek


Archive | 2009

Prediction of localization and interactions of proteinsinvolved in caspase-independent apoptosis

Miroslav Vařecha; Daniela Páclová; Jiřina Procházková; Pavel Matula; Michal Kozubek


Archive | 2009

Acquiarium: Free image acquisition and analysis software forimage cytometry

Pavel Matula; Ondřej Daněk; Martin Maška; Marek Vinkler; Michal Kozubek


Archive | 2009

Acquiarium: Free Software For Image Acquisition And 3D AnalysisOf Fluorescently Labeled Cells

Pavel Matula; Ondřej Daněk; Martin Maška; Marek Vinkler; Michal Kozubek

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Stanislav Kozubek

Academy of Sciences of the Czech Republic

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Emilie Lukášová

Academy of Sciences of the Czech Republic

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Eva Bártová

Academy of Sciences of the Czech Republic

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