Network


Latest external collaboration on country level. Dive into details by clicking on the dots.

Hotspot


Dive into the research topics where Petr Bednařík is active.

Publication


Featured researches published by Petr Bednařík.


Journal of Cerebral Blood Flow and Metabolism | 2015

Neurochemical and BOLD responses during neuronal activation measured in the human visual cortex at 7 Tesla

Petr Bednařík; Ivan Tkáč; Federico Giove; Mauro DiNuzzo; Dinesh K. Deelchand; Uzay E. Emir; Lynn E. Eberly; Silvia Mangia

Several laboratories have consistently reported small concentration changes in lactate, glutamate, aspartate, and glucose in the human cortex during prolonged stimuli. However, whether such changes correlate with blood oxygenation level—dependent functional magnetic resonance imaging (BOLD-fMRI) signals have not been determined. The present study aimed at characterizing the relationship between metabolite concentrations and BOLD-fMRI signals during a block-designed paradigm of visual stimulation. Functional magnetic resonance spectroscopy (fMRS) and fMRI data were acquired from 12 volunteers. A short echo-time semi-LASER localization sequence optimized for 7 Tesla was used to achieve full signal-intensity MRS data. The group analysis confirmed that during stimulation lactate and glutamate increased by 0.26±0.06 μmol/g (∼30%) and 0.28±0.03 μmol/g (∼3%), respectively, while aspartate and glucose decreased by 0.20±0.04 μmol/g (∼5%) and 0.19±0.03 μmol/g (∼16%), respectively. The single-subject analysis revealed that BOLD-fMRI signals were positively correlated with glutamate and lactate concentration changes. The results show a linear relationship between metabolic and BOLD responses in the presence of strong excitatory sensory inputs, and support the notion that increased functional energy demands are sustained by oxidative metabolism. In addition, BOLD signals were inversely correlated with baseline γ-aminobutyric acid concentration. Finally, we discussed the critical importance of taking into account linewidth effects on metabolite quantification in fMRS paradigms.


Magnetic Resonance in Medicine | 2016

Test-retest reproducibility of neurochemical profiles with short-echo, single-voxel MR spectroscopy at 3T and 7T

Melissa Terpstra; Ian Cheong; Tianmeng Lyu; Dinesh K. Deelchand; Uzay E. Emir; Petr Bednařík; Lynn E. Eberly; Gülin Öz

To determine the test‐retest reproducibility of neurochemical concentrations obtained with a highly optimized, short‐echo, single‐voxel proton MR spectroscopy (MRS) pulse sequence at 3T and 7T using state‐of‐the‐art hardware.


NMR in Biomedicine | 2015

Feasibility and reproducibility of neurochemical profile quantification in the human hippocampus at 3T

Petr Bednařík; Amir Moheet; Dinesh K. Deelchand; Uzay E. Emir; Lynn E. Eberly; Martin Bareš; Elizabeth R. Seaquist; Guelin Oz

Hippocampal dysfunction is known to be associated with several neurological and neuropsychiatric disorders such as Alzheimers disease, epilepsy, schizophrenia and depression; therefore, there has been significant clinical interest in studying hippocampal neurochemistry. However, the hippocampus is a challenging region to study using 1H MRS, hence the use of MRS for clinical research in this region has been limited. Our goal was therefore to investigate the feasibility of obtaining high‐quality hippocampal spectra that allow reliable quantification of a neurochemical profile and to establish inter‐session reproducibility of hippocampal MRS, including reproducibility of voxel placement, spectral quality and neurochemical concentrations. Ten healthy volunteers were scanned in two consecutive sessions using a standard clinical 3 T MR scanner. Neurochemical profiles were obtained with a short‐echo (TE = 28 ms) semi‐LASER localization sequence from a relatively small (~4 mL) voxel that covered about 62% of the hippocampal volume as calculated from segmentation of T1‐weighted images. Voxel composition was highly reproducible between sessions, with test–retest coefficients of variation (CVs) of 3.5% and 7.5% for gray and white matter volume fraction, respectively. Excellent signal‐to‐noise ratio (~54 based on the N‐acetylaspartate (NAA) methyl peak in non‐apodized spectra) and linewidths (~9 Hz for water) were achieved reproducibly in all subjects. The spectral quality allowed quantification of NAA, total choline, total creatine, myo‐inositol and glutamate with high scan–rescan reproducibility (CV ≤ 6%) and quantification precision (Cramér–Rao lower bound, CRLB < 9%). Four other metabolites, including glutathione and glucose, were quantified with scan–rescan CV below 20%. Therefore, the highly optimized, short‐echo semi‐LASER sequence together with FASTMAP shimming substantially improved the reproducibility and number of quantifiable metabolites relative to prior reports. In addition, the between‐session variation in metabolite concentrations, as well as CRLB, was lower than the between‐subject variation of the concentrations for most metabolites, indicating that the method has the sensitivity to detect inter‐individual differences in the healthy brain. Copyright


Movement Disorders | 2012

Impairment of brain vessels may contribute to mortality in patients with Parkinson's disease.

Ivan Rektor; David Goldemund; Petr Bednařík; Kateřina Sheardová; Zuzana Michálková; Sabina Telecká; Michal Dufek; Irena Rektorová

The effect of brain‐vessel pathology on mortality in 57 consecutive PD patients was studied.


Brain Topography | 2018

Stable Scalp EEG Spatiospectral Patterns Across Paradigms Estimated by Group ICA

René Labounek; David A. Bridwell; Radek Mareček; Martin Lamoš; Michal Mikl; Tomáš Slavíček; Petr Bednařík; Jaromír Baštinec; Petr Hluštík; Milan Brázdil; Jiří Jan

Electroencephalography (EEG) oscillations reflect the superposition of different cortical sources with potentially different frequencies. Various blind source separation (BSS) approaches have been developed and implemented in order to decompose these oscillations, and a subset of approaches have been developed for decomposition of multi-subject data. Group independent component analysis (Group ICA) is one such approach, revealing spatiospectral maps at the group level with distinct frequency and spatial characteristics. The reproducibility of these distinct maps across subjects and paradigms is relatively unexplored domain, and the topic of the present study. To address this, we conducted separate group ICA decompositions of EEG spatiospectral patterns on data collected during three different paradigms or tasks (resting-state, semantic decision task and visual oddball task). K-means clustering analysis of back-reconstructed individual subject maps demonstrates that fourteen different independent spatiospectral maps are present across the different paradigms/tasks, i.e. they are generally stable.


Journal of Cerebral Blood Flow and Metabolism | 2017

Neurochemical responses to chromatic and achromatic stimuli in the human visual cortex

Petr Bednařík; Ivan Tkáč; Federico Giove; Lynn E. Eberly; Dinesh K. Deelchand; Felipe Barreto; Silvia Mangia

In the present study, we aimed at determining the metabolic responses of the human visual cortex during the presentation of chromatic and achromatic stimuli, known to preferentially activate two separate clusters of neuronal populations (called “blobs” and “interblobs”) with distinct sensitivity to color or luminance features. Since blobs and interblobs have different cytochrome-oxidase (COX) content and micro-vascularization level (i.e., different capacities for glucose oxidation), different functional metabolic responses during chromatic vs. achromatic stimuli may be expected. The stimuli were optimized to evoke a similar load of neuronal activation as measured by the bold oxygenation level dependent (BOLD) contrast. Metabolic responses were assessed using functional 1H MRS at 7 T in 12 subjects. During both chromatic and achromatic stimuli, we observed the typical increases in glutamate and lactate concentration, and decreases in aspartate and glucose concentration, that are indicative of increased glucose oxidation. However, within the detection sensitivity limits, we did not observe any difference between metabolic responses elicited by chromatic and achromatic stimuli. We conclude that the higher energy demands of activated blobs and interblobs are supported by similar increases in oxidative metabolism despite the different capacities of these neuronal populations.


Archive | 2019

Fast In Vivo High-Resolution Diffusion MRI of the Human Cervical Spinal Cord Microstructure

René Labounek; Jan Valošek; Jakub Zimolka; Zuzana Piskořová; Tomáš Horák; Alena Svátková; Petr Bednařík; Pavel Hok; Lubomír Vojtíšek; Petr Hluštík; Josef Bednařík; Christophe Lenglet

Diffusion Magnetic Resonance Imaging (dMRI) is a widely-utilized method for assessment of microstructural properties in the central nervous system i.e., the brain and spinal cord (SC). In the SC, almost all previous human studies utilized Diffusion Tensor Imaging (DTI), which cannot accurately model areas where white matter (WM) pathways cross or diverge. While High Angular Diffusion Resolution Imaging (HARDI) can overcome some of these limitations, longer acquisition times critically limit its applicability to clinical human studies. In addition, previous human HARDI studies have used limited spatial resolution, with typically a few slices and voxel size ~1 × 1 × 5 mm3 being acquired in tens of minutes. Thus, we have optimized a novel fast HARDI protocol that allows collecting dMRI data at high angular and spatial resolutions in clinically-feasible time. Our data was acquired, using a 3T Siemens Prisma scanner, in less than 9 min. It has a total of 75 diffusion-weighted volumes and high spatial resolution of 0.67 × 0.67 × 3 mm3 (after interpolation in Fourier space) covering the cervical segments C4–C6. Our preliminary results demonstrate applicability of our technique in healthy individuals with good correspondence between low fractional anisotropy (FA) gray matter areas from the dMRI scans, and the same regions delineated on T2-weighted MR images with spatial resolution of 0.35 × 0.35 × 2.5 mm3. Our data also allows the detection of crossing fibers that were previously shown in vivo only in animal studies.


Brain and behavior | 2018

White matter measures correlate with essential tremor severity-A pilot diffusion tensor imaging study

Igor Nestrasil; Alena Svátková; Kyle Rudser; Ravishankar Chityala; Amy Wakumoto; Bryon A. Mueller; Petr Bednařík; Paul Tuite; Xiang Wu; Khalaf Bushara

An evolving pathophysiological concept of essential tremor (ET) points to diffuse brain network involvement, which emphasizes the need to investigate white matter (WM) changes associated with motor symptoms of ET.


Archive | 2017

HARDI dMRI imaging of cervical spinal cord

Jakub Zimolka; Zuzana Piskořová; Alena Svátková; Petr Bednařík; Tomáš Horák; Pavel Hok; Josef Bednařík; Christophe Lenglet; René Labounek


Molecular Genetics and Metabolism | 2017

White matter alterations in mucopolysaccharidosis type I assessed by automated DTI analysis

Igor Nestrasil; Alena Svátková; Ofer Pasternak; Kyle Rudser; Petr Bednařík; Bryon A. Mueller; Amy Wakamuto; Elsa Shapiro; Chester B. Whitley

Collaboration


Dive into the Petr Bednařík's collaboration.

Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar

Ivan Tkáč

University of Minnesota

View shared research outputs
Top Co-Authors

Avatar

Amir Moheet

University of Minnesota

View shared research outputs
Top Co-Authors

Avatar

Gülin Öz

University of Minnesota

View shared research outputs
Top Co-Authors

Avatar
Top Co-Authors

Avatar
Top Co-Authors

Avatar

Anjali Kumar

University of Minnesota

View shared research outputs
Researchain Logo
Decentralizing Knowledge